RNA–Protein interactions for RNA: ENST00000489081.5

CMSS1-205, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2 BASIC

Gene CMSS1, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-205ENST00000489081 LMNB2Q03252 620 aa11.83□□□□□ -0.52
CMSS1-205ENST00000489081 DLX2Q07687 328 aaPredicted RBP11.83□□□□□ -0.52
CMSS1-205ENST00000489081 USP4Q13107 963 aa11.83□□□□□ -0.52
CMSS1-205ENST00000489081 CBX2Q14781 532 aaPredicted RBP11.83□□□□□ -0.52
CMSS1-205ENST00000489081 ALFQ53S48 1182 aa11.83□□□□□ -0.52
CMSS1-205ENST00000489081 SLC45A4Q5BKX6 768 aa11.83□□□□□ -0.52
CMSS1-205ENST00000489081 PRPF38BQ5VTL8 546 aaKnown RBP11.83□□□□□ -0.52
CMSS1-205ENST00000489081 AFMIDQ63HM1 303 aa11.83□□□□□ -0.52
CMSS1-205ENST00000489081 DARS2Q6PI48 645 aaKnown RBP11.83□□□□□ -0.52
CMSS1-205ENST00000489081 SYDE1Q6ZW31 735 aaPredicted RBP11.83□□□□□ -0.52
CMSS1-205ENST00000489081 ZC3H18Q86VM9 953 aaKnown RBP11.83□□□□□ -0.52
CMSS1-205ENST00000489081 ARID3BQ8IVW6 561 aaPredicted RBP11.83□□□□□ -0.52
CMSS1-205ENST00000489081 ARHGAP12Q8IWW6 846 aa11.83□□□□□ -0.52
CMSS1-205ENST00000489081 BBS7Q8IWZ6 715 aa11.83□□□□□ -0.52
CMSS1-205ENST00000489081 NPAS3Q8IXF0 933 aa11.83□□□□□ -0.52
CMSS1-205ENST00000489081 TP53INP2Q8IXH6 220 aa11.83□□□□□ -0.52
CMSS1-205ENST00000489081 LZTR1Q8N653 840 aa11.83□□□□□ -0.52
CMSS1-205ENST00000489081 ALLCQ8N6M5 410 aa11.83□□□□□ -0.52
CMSS1-205ENST00000489081 RIN3Q8TB24 985 aa11.83□□□□□ -0.52
CMSS1-205ENST00000489081 LRCH3Q96II8 777 aa11.83□□□□□ -0.52
CMSS1-205ENST00000489081 TMEM121Q9BTD3 319 aa11.83□□□□□ -0.52
CMSS1-205ENST00000489081 C10orf88Q9H8K7 445 aa11.83□□□□□ -0.52
CMSS1-205ENST00000489081 NDFIP2Q9NV92 336 aa11.83□□□□□ -0.52
CMSS1-205ENST00000489081 DONSONQ9NYP3 566 aa11.83□□□□□ -0.52
CMSS1-205ENST00000489081 ZNF212Q9UDV6 495 aa11.83□□□□□ -0.52
CMSS1-205ENST00000489081 NEU2Q9Y3R4 380 aa11.83□□□□□ -0.52
CMSS1-205ENST00000489081 BCLAF3A2AJT9 711 aaKnown RBP11.82□□□□□ -0.52
CMSS1-205ENST00000489081 ZSCAN5CA6NGD5 496 aaPredicted RBP11.82□□□□□ -0.52
CMSS1-205ENST00000489081 TRDMT1O14717 391 aaKnown RBP11.82□□□□□ -0.52
CMSS1-205ENST00000489081 TSPAN3O60637 253 aa11.82□□□□□ -0.52
CMSS1-205ENST00000489081 HEXIM1O94992 359 aaKnown RBP11.82□□□□□ -0.52
CMSS1-205ENST00000489081 GAS8O95995 478 aa11.82□□□□□ -0.52
CMSS1-205ENST00000489081 IGFBP4P22692 258 aa11.82□□□□□ -0.52
CMSS1-205ENST00000489081 RPS24P62847 133 aaKnown RBP11.82□□□□□ -0.52
CMSS1-205ENST00000489081 GALNT2Q10471 571 aa11.82□□□□□ -0.52
CMSS1-205ENST00000489081 PDK1Q15118 436 aa11.82□□□□□ -0.52
CMSS1-205ENST00000489081 ZNF77Q15935 545 aa11.82□□□□□ -0.52
CMSS1-205ENST00000489081 KCTD19Q17RG1 926 aaPredicted RBP11.82□□□□□ -0.52
CMSS1-205ENST00000489081 RABGAP1LQ5R372 815 aa11.82□□□□□ -0.52
CMSS1-205ENST00000489081 B4GALNT4Q76KP1 1039 aa11.82□□□□□ -0.52
CMSS1-205ENST00000489081 TFAP2DQ7Z6R9 452 aa11.82□□□□□ -0.52
CMSS1-205ENST00000489081 CIR1Q86X95 450 aaPredicted RBP11.82□□□□□ -0.52
CMSS1-205ENST00000489081 CDKL3Q8IVW4 592 aaPredicted RBP11.82□□□□□ -0.52
CMSS1-205ENST00000489081 CFAP52Q8N1V2 620 aa11.82□□□□□ -0.52
CMSS1-205ENST00000489081 UMODL1-AS1Q8N2C9 162 aa11.82□□□□□ -0.52
CMSS1-205ENST00000489081 CPXM2Q8N436 756 aa11.82□□□□□ -0.52
CMSS1-205ENST00000489081 CCDC33Q8N5R6 958 aa11.82□□□□□ -0.52
CMSS1-205ENST00000489081 NETO2Q8NC67 525 aa11.82□□□□□ -0.52
CMSS1-205ENST00000489081 TTC16Q8NEE8 873 aa11.82□□□□□ -0.52
CMSS1-205ENST00000489081 ZSCAN18Q8TBC5 510 aaPredicted RBP11.82□□□□□ -0.52
CMSS1-205ENST00000489081 RUBCNQ92622 972 aa11.82□□□□□ -0.52
CMSS1-205ENST00000489081 FGF13Q92913 245 aa11.82□□□□□ -0.52
CMSS1-205ENST00000489081 PABPC5Q96DU9 382 aaKnown RBP11.82□□□□□ -0.52
CMSS1-205ENST00000489081 MSLNLQ96KJ4 702 aa11.82□□□□□ -0.52
CMSS1-205ENST00000489081 QKIQ96PU8 341 aaKnown RBP eCLIP11.82□□□□□ -0.52
CMSS1-205ENST00000489081 PNKPQ96T60 521 aa11.82□□□□□ -0.52
CMSS1-205ENST00000489081 ERP44Q9BS26 406 aa11.82□□□□□ -0.52
CMSS1-205ENST00000489081 TRIM51Q9BSJ1 452 aa11.82□□□□□ -0.52
CMSS1-205ENST00000489081 RETREG1Q9H6L5 497 aa11.82□□□□□ -0.52
CMSS1-205ENST00000489081 NOL6Q9H6R4 1146 aaKnown RBP11.82□□□□□ -0.52
CMSS1-205ENST00000489081 KIF9Q9HAQ2 790 aa11.82□□□□□ -0.52
CMSS1-205ENST00000489081 USP29Q9HBJ7 922 aa11.82□□□□□ -0.52
CMSS1-205ENST00000489081 CLDND1Q9NY35 253 aa11.82□□□□□ -0.52
CMSS1-205ENST00000489081 ZFP37Q9Y6Q3 630 aaPredicted RBP11.82□□□□□ -0.52
CMSS1-205ENST00000489081 DOCK6Q96HP0 2047 aa11.81□□□□□ -0.52
CMSS1-205ENST00000489081 CFAP69A5D8W1 941 aa11.81□□□□□ -0.52
CMSS1-205ENST00000489081 SGK1O00141 431 aa11.81□□□□□ -0.52
CMSS1-205ENST00000489081 PPP1R12AO14974 1030 aaPredicted RBP11.81□□□□□ -0.52
CMSS1-205ENST00000489081 NCAM2O15394 837 aa11.81□□□□□ -0.52
CMSS1-205ENST00000489081 MX2P20592 715 aa11.81□□□□□ -0.52
CMSS1-205ENST00000489081 RBL1P28749 1068 aa11.81□□□□□ -0.52
CMSS1-205ENST00000489081 STIP1P31948 543 aaKnown RBP11.81□□□□□ -0.52
CMSS1-205ENST00000489081 LTBRP36941 435 aa11.81□□□□□ -0.52
CMSS1-205ENST00000489081 MAPKAPK2P49137 400 aa11.81□□□□□ -0.52
CMSS1-205ENST00000489081 SGSHP51688 502 aa11.81□□□□□ -0.52
CMSS1-205ENST00000489081 NDST2P52849 883 aa11.81□□□□□ -0.52
CMSS1-205ENST00000489081 GDF10P55107 478 aa11.81□□□□□ -0.52
CMSS1-205ENST00000489081 CDH4P55283 916 aa11.81□□□□□ -0.52
CMSS1-205ENST00000489081 GUCY2DQ02846 1103 aa11.81□□□□□ -0.52
CMSS1-205ENST00000489081 PTK6Q13882 451 aa11.81□□□□□ -0.52
CMSS1-205ENST00000489081 PRKD1Q15139 912 aaPredicted RBP11.81□□□□□ -0.52
CMSS1-205ENST00000489081 PPP1R7Q15435 360 aa11.81□□□□□ -0.52
CMSS1-205ENST00000489081 ATAT1Q5SQI0 421 aa11.81□□□□□ -0.52
CMSS1-205ENST00000489081 TTC39BQ5VTQ0 682 aaPredicted RBP11.81□□□□□ -0.52
CMSS1-205ENST00000489081 DUPD1Q68J44 220 aa11.81□□□□□ -0.52
CMSS1-205ENST00000489081 CES5AQ6NT32 575 aa11.81□□□□□ -0.52
CMSS1-205ENST00000489081 CHST9Q7L1S5 443 aa11.81□□□□□ -0.52
CMSS1-205ENST00000489081 GET4Q7L5D6 327 aaPredicted RBP11.81□□□□□ -0.52
CMSS1-205ENST00000489081 GSTA5Q7RTV2 222 aa11.81□□□□□ -0.52
CMSS1-205ENST00000489081 LRRN4Q8WUT4 740 aa11.81□□□□□ -0.52
CMSS1-205ENST00000489081 TFB1MQ8WVM0 346 aaKnown RBP11.81□□□□□ -0.52
CMSS1-205ENST00000489081 RSAD2Q8WXG1 361 aa11.81□□□□□ -0.52
CMSS1-205ENST00000489081 SEC14L1Q92503 715 aa11.81□□□□□ -0.52
CMSS1-205ENST00000489081 HDAC11Q96DB2 347 aa11.81□□□□□ -0.52
CMSS1-205ENST00000489081 RTP4Q96DX8 246 aa11.81□□□□□ -0.52
CMSS1-205ENST00000489081 CELF6Q96J87 481 aaKnown RBP11.81□□□□□ -0.52
CMSS1-205ENST00000489081 FAM161BQ96MY7 647 aa11.81□□□□□ -0.52
CMSS1-205ENST00000489081 GAS2L1Q99501 681 aaPredicted RBP11.81□□□□□ -0.52
CMSS1-205ENST00000489081 LGMNQ99538 433 aa11.81□□□□□ -0.52
CMSS1-205ENST00000489081 HINFPQ9BQA5 517 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms