RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 RABGEF1Q9UJ41 708 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 LSM7Q9UK45 103 aaKnown RBP12.07□□□□□ -0.48
TRA2B-214ENST00000487615 E9PBE3 544 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 GOLGA8TH3BQL2 631 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 KLHL41O60662 606 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 RAMP2O60895 175 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 THRAP10827 490 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 IRF1P10914 325 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 ALDH1A3P47895 512 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 NUDT2P50583 147 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 RAD51Q06609 339 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 CAPRIN2Q6IMN6 1127 aaKnown RBP12.07□□□□□ -0.48
TRA2B-214ENST00000487615 PIWIL2Q8TC59 973 aaKnown RBP12.07□□□□□ -0.48
TRA2B-214ENST00000487615 BRI3BPQ8WY22 251 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 HNRNPABQ99729 332 aaKnown RBP12.07□□□□□ -0.48
TRA2B-214ENST00000487615 TBL1YQ9BQ87 522 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 TRIM4Q9C037 500 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 ATXN3LQ9H3M9 355 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 TMEM51Q9NW97 253 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.07□□□□□ -0.48
TRA2B-214ENST00000487615 DDHD2O94830 711 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 SUPT7LO94864 414 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 TMEM63AO94886 807 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 ATP5BP06576 529 aaKnown RBP12.07□□□□□ -0.48
TRA2B-214ENST00000487615 PAX3P23760 479 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 ZNF177Q13360 481 aaPredicted RBP12.07□□□□□ -0.48
TRA2B-214ENST00000487615 FAM171A1Q5VUB5 890 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 VSTM1Q6UX27 236 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 TDRD5Q8NAT2 981 aaKnown RBP12.07□□□□□ -0.48
TRA2B-214ENST00000487615 GLIS1Q8NBF1 620 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 ARRDC4Q8NCT1 418 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 SPDL1Q96EA4 605 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 CENPKQ9BS16 269 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 GPAMQ9HCL2 828 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 ENTPD7Q9NQZ7 604 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 TSR3Q9UJK0 312 aaKnown RBP12.07□□□□□ -0.48
TRA2B-214ENST00000487615 ANGPT2O15123 496 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 GSTA4O15217 222 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 SKAP2O75563 359 aaPredicted RBP12.07□□□□□ -0.48
TRA2B-214ENST00000487615 DGKIO75912 1065 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 RHOBTB1O94844 696 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 MLNP12872 115 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 YWHAQP27348 245 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 SKIV2L2P42285 1042 aaKnown RBP12.07□□□□□ -0.48
TRA2B-214ENST00000487615 NCALDP61601 193 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 SLC25A11Q02978 314 aaKnown RBP12.07□□□□□ -0.48
TRA2B-214ENST00000487615 CSHL1Q14406 222 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 TRIP10Q15642 601 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 ZNF470Q6ECI4 717 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 LRRC8EQ6NSJ5 796 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 RGMBQ6NW40 437 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 TMEM174Q8WUU8 243 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 NDRG1Q92597 394 aaKnown RBP12.07□□□□□ -0.48
TRA2B-214ENST00000487615 LENG1Q96BZ8 264 aaPredicted RBP12.07□□□□□ -0.48
TRA2B-214ENST00000487615 UROC1Q96N76 676 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 QKIQ96PU8 341 aaKnown RBP eCLIP12.07□□□□□ -0.482e-8■■□□□ 11.6
TRA2B-214ENST00000487615 NMRAL1Q9HBL8 299 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 OLA1Q9NTK5 396 aaKnown RBP12.07□□□□□ -0.48
TRA2B-214ENST00000487615 RAD54BQ9Y620 910 aa12.07□□□□□ -0.48
TRA2B-214ENST00000487615 FAM237BA0A1B0GVD1 139 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 MFSD11O43934 449 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 RBP1P09455 135 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 LMO2P25791 158 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 WNT7BP56706 349 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 SLC20A2Q08357 652 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 KLF1Q13351 362 aaPredicted RBP12.06□□□□□ -0.48
TRA2B-214ENST00000487615 SOWAHAQ2M3V2 549 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 TRMT5Q32P41 509 aaKnown RBP12.06□□□□□ -0.48
TRA2B-214ENST00000487615 ARCQ7LC44 396 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 TTC30AQ86WT1 665 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 FAR2Q96K12 515 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 TCF7L2Q9NQB0 619 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 HEATR9A2RTY3 570 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 SUPT3HB4E1H0 165 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 SUPT3HO75486 399 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 ITGA2BP08514 1039 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 KRT16P08779 473 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 SERPINB5P36952 375 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 RBBP7Q16576 425 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 ACCSLQ4AC99 568 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 PIGWQ7Z7B1 504 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 RPAINQ86UA6 219 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 CCDC185Q8N715 623 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 SEPT8Q92599 483 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 CYP4F12Q9HCS2 524 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 SSU72Q9NP77 194 aaKnown RBP12.06□□□□□ -0.48
TRA2B-214ENST00000487615 ARHGEF4Q9NR80 690 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 THEGQ9P2T0 379 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 FETUBQ9UGM5 382 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 NENFQ9UMX5 172 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 SOX13Q9UN79 622 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 VPS9D1Q9Y2B5 631 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 ECM29Q5VYK3 1845 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 ADGRA2Q96PE1 1338 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 GNGT2O14610 69 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 STX7O15400 261 aaKnown RBP12.06□□□□□ -0.48
TRA2B-214ENST00000487615 ABCG1P45844 678 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 KPNA1P52294 538 aaPredicted RBP12.06□□□□□ -0.48
TRA2B-214ENST00000487615 POLE2P56282 527 aa12.06□□□□□ -0.48
TRA2B-214ENST00000487615 GRIK3Q13003 919 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms