RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 LINC01465Q8N7H1 131 aa6.32□□□□□ -1.4
CUL3-211ENST00000487558 TERB1Q8NA31 727 aa6.32□□□□□ -1.4
CUL3-211ENST00000487558 LSM14AQ8ND56 463 aaKnown RBP6.32□□□□□ -1.4
CUL3-211ENST00000487558 MAFAQ8NHW3 353 aaPredicted RBP6.32□□□□□ -1.4
CUL3-211ENST00000487558 MMS19Q96T76 1030 aa6.32□□□□□ -1.4
CUL3-211ENST00000487558 PHF7Q9BWX1 381 aaPredicted RBP6.32□□□□□ -1.4
CUL3-211ENST00000487558 INTS2Q9H0H0 1204 aaKnown RBP6.32□□□□□ -1.4
CUL3-211ENST00000487558 PRDM13Q9H4Q3 707 aa6.32□□□□□ -1.4
CUL3-211ENST00000487558 VEZTQ9HBM0 779 aa6.32□□□□□ -1.4
CUL3-211ENST00000487558 SEMA5BQ9P283 1151 aa6.32□□□□□ -1.4
CUL3-211ENST00000487558 CNPY2Q9Y2B0 182 aa6.32□□□□□ -1.4
CUL3-211ENST00000487558 DMRT1Q9Y5R6 373 aa6.32□□□□□ -1.4
CUL3-211ENST00000487558 COL4A3Q01955 1670 aa6.32□□□□□ -1.4
CUL3-211ENST00000487558 TDRD9Q8NDG6 1382 aaKnown RBP6.31□□□□□ -1.4
CUL3-211ENST00000487558 PRSS47A8MTI9 375 aa6.31□□□□□ -1.4
CUL3-211ENST00000487558 H3BNC9 293 aa6.31□□□□□ -1.4
CUL3-211ENST00000487558 EXOC3O60645 756 aa6.31□□□□□ -1.4
CUL3-211ENST00000487558 ZBED4O75132 1171 aa6.31□□□□□ -1.4
CUL3-211ENST00000487558 KRT4P19013 534 aa6.31□□□□□ -1.4
CUL3-211ENST00000487558 SFPQP23246 707 aaKnown RBP eCLIP6.31□□□□□ -1.4
CUL3-211ENST00000487558 ADRA1BP35368 520 aa6.31□□□□□ -1.4
CUL3-211ENST00000487558 HOXD12P35452 270 aa6.31□□□□□ -1.4
CUL3-211ENST00000487558 STAT6P42226 847 aa6.31□□□□□ -1.4
CUL3-211ENST00000487558 CCT4P50991 539 aaKnown RBP6.31□□□□□ -1.4
CUL3-211ENST00000487558 SLC37A1P57057 533 aa6.31□□□□□ -1.4
CUL3-211ENST00000487558 DCAF7P61962 342 aa6.31□□□□□ -1.4
CUL3-211ENST00000487558 SEC23BQ15437 767 aa6.31□□□□□ -1.4
CUL3-211ENST00000487558 FAM69AQ5T7M9 428 aa6.31□□□□□ -1.4
CUL3-211ENST00000487558 ITPRIPL1Q6GPH6 555 aa6.31□□□□□ -1.4
CUL3-211ENST00000487558 NAPRTQ6XQN6 538 aa6.31□□□□□ -1.4
CUL3-211ENST00000487558 Q6YL49 198 aa6.31□□□□□ -1.4
CUL3-211ENST00000487558 BCDIN3DQ7Z5W3 292 aaKnown RBP6.31□□□□□ -1.4
CUL3-211ENST00000487558 ADGRG6Q86SQ4 1221 aa6.31□□□□□ -1.4
CUL3-211ENST00000487558 GALNT4Q8N4A0 578 aa6.31□□□□□ -1.4
CUL3-211ENST00000487558 ZNF366Q8N895 744 aa6.31□□□□□ -1.4
CUL3-211ENST00000487558 BEND2Q8NDZ0 799 aa6.31□□□□□ -1.4
CUL3-211ENST00000487558 DAZAP1Q96EP5 407 aaKnown RBP6.31□□□□□ -1.4
CUL3-211ENST00000487558 KAZALD1Q96I82 304 aa6.31□□□□□ -1.4
CUL3-211ENST00000487558 PDLIM2Q96JY6 352 aa6.31□□□□□ -1.4
CUL3-211ENST00000487558 CCDC17Q96LX7 622 aa6.31□□□□□ -1.4
CUL3-211ENST00000487558 PRRX2Q99811 253 aa6.31□□□□□ -1.4
CUL3-211ENST00000487558 TREX2Q9BQ50 279 aaPredicted RBP6.31□□□□□ -1.4
CUL3-211ENST00000487558 TRIM31Q9BZY9 425 aa6.31□□□□□ -1.4
CUL3-211ENST00000487558 TRIM2Q9C040 744 aa6.31□□□□□ -1.4
CUL3-211ENST00000487558 KLQ9UEF7 1012 aa6.31□□□□□ -1.4
CUL3-211ENST00000487558 SLC25A13Q9UJS0 675 aa6.31□□□□□ -1.4
CUL3-211ENST00000487558 HEMK1Q9Y5R4 338 aaPredicted RBP6.31□□□□□ -1.4
CUL3-211ENST00000487558 EPN1Q9Y6I3 576 aaPredicted RBP6.31□□□□□ -1.4
CUL3-211ENST00000487558 GOLGA6L10A0A0M3HER8 536 aa6.3□□□□□ -1.4
CUL3-211ENST00000487558 PGPEP1LA6NFU8 196 aa6.3□□□□□ -1.4
CUL3-211ENST00000487558 TNPO2O14787 897 aaKnown RBP6.3□□□□□ -1.4
CUL3-211ENST00000487558 USO1O60763 962 aaKnown RBP6.3□□□□□ -1.4
CUL3-211ENST00000487558 F9P00740 461 aa6.3□□□□□ -1.4
CUL3-211ENST00000487558 ELFN1P0C7U0 828 aa6.3□□□□□ -1.4
CUL3-211ENST00000487558 CYP4B1P13584 511 aa6.3□□□□□ -1.4
CUL3-211ENST00000487558 PRPH2P23942 346 aa6.3□□□□□ -1.4
CUL3-211ENST00000487558 NDUFS1P28331 727 aa6.3□□□□□ -1.4
CUL3-211ENST00000487558 CCR9P51686 369 aa6.3□□□□□ -1.4
CUL3-211ENST00000487558 MVDP53602 400 aa6.3□□□□□ -1.4
CUL3-211ENST00000487558 OAZ1P54368 228 aa6.3□□□□□ -1.4
CUL3-211ENST00000487558 CDH15P55291 814 aa6.3□□□□□ -1.4
CUL3-211ENST00000487558 ARHGAP8P85298 464 aa6.3□□□□□ -1.4
CUL3-211ENST00000487558 PRKG2Q13237 762 aa6.3□□□□□ -1.4
CUL3-211ENST00000487558 GAB1Q13480 694 aa6.3□□□□□ -1.4
CUL3-211ENST00000487558 KCNB1Q14721 858 aa6.3□□□□□ -1.4
CUL3-211ENST00000487558 NAA25Q14CX7 972 aa6.3□□□□□ -1.4
CUL3-211ENST00000487558 GPATCH4Q5T3I0 446 aaKnown RBP6.3□□□□□ -1.4
CUL3-211ENST00000487558 SPATA1Q5VX52 437 aa6.3□□□□□ -1.4
CUL3-211ENST00000487558 TMEM65Q6PI78 240 aa6.3□□□□□ -1.4
CUL3-211ENST00000487558 VSTM1Q6UX27 236 aa6.3□□□□□ -1.4
CUL3-211ENST00000487558 DCDC5Q6ZRR9 648 aa6.3□□□□□ -1.4
CUL3-211ENST00000487558 GRASPQ7Z6J2 395 aaPredicted RBP6.3□□□□□ -1.4
CUL3-211ENST00000487558 DNAJC10Q8IXB1 793 aa6.3□□□□□ -1.4
CUL3-211ENST00000487558 TNIP2Q8NFZ5 429 aa6.3□□□□□ -1.4
CUL3-211ENST00000487558 RFWD2Q8NHY2 731 aa6.3□□□□□ -1.4
CUL3-211ENST00000487558 NCSTNQ92542 709 aa6.3□□□□□ -1.4
CUL3-211ENST00000487558 RNFT2Q96EX2 444 aa6.3□□□□□ -1.4
CUL3-211ENST00000487558 ZNF845Q96IR2 970 aaPredicted RBP6.3□□□□□ -1.4
CUL3-211ENST00000487558 HIC2Q96JB3 615 aa6.3□□□□□ -1.4
CUL3-211ENST00000487558 TIGD1Q96MW7 591 aa6.3□□□□□ -1.4
CUL3-211ENST00000487558 FYTTD1Q96QD9 318 aaKnown RBP6.3□□□□□ -1.4
CUL3-211ENST00000487558 CHCHD6Q9BRQ6 235 aa6.3□□□□□ -1.4
CUL3-211ENST00000487558 MROH8Q9H579 483 aa6.3□□□□□ -1.4
CUL3-211ENST00000487558 TLR8Q9NR97 1041 aaKnown RBP6.3□□□□□ -1.4
CUL3-211ENST00000487558 SLC22A11Q9NSA0 550 aa6.3□□□□□ -1.4
CUL3-211ENST00000487558 BEX4Q9NWD9 120 aaPredicted RBP6.3□□□□□ -1.4
CUL3-211ENST00000487558 SIRT4Q9Y6E7 314 aaPredicted RBP6.3□□□□□ -1.4
CUL3-211ENST00000487558 DYTNA2CJ06 578 aa6.29□□□□□ -1.4
CUL3-211ENST00000487558 GAGE10A6NGK3 116 aa6.29□□□□□ -1.4
CUL3-211ENST00000487558 NPIPB13A6NJU9 1138 aa6.29□□□□□ -1.4
CUL3-211ENST00000487558 FAM90A7PA6NKC0 464 aa6.29□□□□□ -1.4
CUL3-211ENST00000487558 NPIPB5A8MRT5 1133 aa6.29□□□□□ -1.4
CUL3-211ENST00000487558 FAM90A22PA8MWA6 464 aa6.29□□□□□ -1.4
CUL3-211ENST00000487558 FAM90A12PA8MX19 464 aa6.29□□□□□ -1.4
CUL3-211ENST00000487558 FAM90A23PA8MXZ1 464 aa6.29□□□□□ -1.4
CUL3-211ENST00000487558 NPIPB4C9JG80 1138 aa6.29□□□□□ -1.4
CUL3-211ENST00000487558 K7ENM7 598 aa6.29□□□□□ -1.4
CUL3-211ENST00000487558 PRYO14603 147 aa6.29□□□□□ -1.4
CUL3-211ENST00000487558 ALDOCP09972 364 aaKnown RBP6.29□□□□□ -1.4
CUL3-211ENST00000487558 HSPA1AP0DMV8 641 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms