RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 TRIM69Q86WT6 500 aa12.16□□□□□ -0.46
TRIM56-204ENST00000487252 FBXO39Q8N4B4 442 aa12.16□□□□□ -0.46
TRIM56-204ENST00000487252 OR5B17Q8NGF7 314 aa12.16□□□□□ -0.46
TRIM56-204ENST00000487252 DDI1Q8WTU0 396 aa12.16□□□□□ -0.46
TRIM56-204ENST00000487252 FAM129BQ96TA1 746 aa12.16□□□□□ -0.46
TRIM56-204ENST00000487252 SMOQ99835 787 aa12.16□□□□□ -0.46
TRIM56-204ENST00000487252 STRA6Q9BX79 667 aa12.16□□□□□ -0.46
TRIM56-204ENST00000487252 ZNF71Q9NQZ8 489 aaPredicted RBP12.16□□□□□ -0.46
TRIM56-204ENST00000487252 NAV3Q8IVL0 2385 aa12.16□□□□□ -0.46
TRIM56-204ENST00000487252 TBC1D3DA0A087WVF3 549 aa12.15□□□□□ -0.46
TRIM56-204ENST00000487252 TBC1D3IA0A087WXS9 549 aa12.15□□□□□ -0.46
TRIM56-204ENST00000487252 TBC1D3EA0A087X179 549 aa12.15□□□□□ -0.46
TRIM56-204ENST00000487252 TBC1D3KA0A087X1G2 549 aa12.15□□□□□ -0.46
TRIM56-204ENST00000487252 SLC12A8A0AV02 714 aa12.15□□□□□ -0.46
TRIM56-204ENST00000487252 CPED1A4D0V7 1026 aa12.15□□□□□ -0.46
TRIM56-204ENST00000487252 TBC1D3FA6NER0 549 aaPredicted RBP12.15□□□□□ -0.46
TRIM56-204ENST00000487252 TBC1D3LB9A6J9 549 aa12.15□□□□□ -0.46
TRIM56-204ENST00000487252 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.15□□□□□ -0.46
TRIM56-204ENST00000487252 PRAMEF26H0Y7S4 382 aa12.15□□□□□ -0.46
TRIM56-204ENST00000487252 RNGTTO60942 597 aaKnown RBP12.15□□□□□ -0.46
TRIM56-204ENST00000487252 NEBLO76041 1014 aa12.15□□□□□ -0.46
TRIM56-204ENST00000487252 ATP5BP06576 529 aaKnown RBP12.15□□□□□ -0.46
TRIM56-204ENST00000487252 KRT7P08729 469 aa12.15□□□□□ -0.46
TRIM56-204ENST00000487252 TMEM191BP0C7N4 346 aa12.15□□□□□ -0.46
TRIM56-204ENST00000487252 TBC1D3HP0C7X1 549 aa12.15□□□□□ -0.46
TRIM56-204ENST00000487252 RARGP13631 454 aa12.15□□□□□ -0.46
TRIM56-204ENST00000487252 PDIA4P13667 645 aaKnown RBP12.15□□□□□ -0.46
TRIM56-204ENST00000487252 ZNF445P59923 1031 aa12.15□□□□□ -0.46
TRIM56-204ENST00000487252 COG7P83436 770 aa12.15□□□□□ -0.46
TRIM56-204ENST00000487252 GNL2Q13823 731 aaKnown RBP12.15□□□□□ -0.46
TRIM56-204ENST00000487252 ANKRD1Q15327 319 aa12.15□□□□□ -0.46
TRIM56-204ENST00000487252 TMEM119Q4V9L6 283 aa12.15□□□□□ -0.46
TRIM56-204ENST00000487252 C10orf120Q5SQS8 335 aa12.15□□□□□ -0.46
TRIM56-204ENST00000487252 TBC1D3GQ6DHY5 549 aa12.15□□□□□ -0.46
TRIM56-204ENST00000487252 TBC1D3CQ6IPX1 549 aa12.15□□□□□ -0.46
TRIM56-204ENST00000487252 JAMLQ86YT9 394 aa12.15□□□□□ -0.46
TRIM56-204ENST00000487252 MMAAQ8IVH4 418 aaKnown RBP12.15□□□□□ -0.46
TRIM56-204ENST00000487252 TBC1D3Q8IZP1 549 aaPredicted RBP12.15□□□□□ -0.46
TRIM56-204ENST00000487252 FUKQ8N0W3 1084 aa12.15□□□□□ -0.46
TRIM56-204ENST00000487252 GALNT11Q8NCW6 608 aa12.15□□□□□ -0.46
TRIM56-204ENST00000487252 C9orf43Q8TAL5 461 aaPredicted RBP12.15□□□□□ -0.46
TRIM56-204ENST00000487252 SAAL1Q96ER3 474 aa12.15□□□□□ -0.46
TRIM56-204ENST00000487252 ABCB8Q9NUT2 735 aa12.15□□□□□ -0.46
TRIM56-204ENST00000487252 GGA2Q9UJY4 613 aa12.15□□□□□ -0.46
TRIM56-204ENST00000487252 CA5BQ9Y2D0 317 aa12.15□□□□□ -0.46
TRIM56-204ENST00000487252 MED13LQ71F56 2210 aa12.15□□□□□ -0.46
TRIM56-204ENST00000487252 ESPL1Q14674 2120 aa12.14□□□□□ -0.47
TRIM56-204ENST00000487252 ATP8B3O60423 1300 aa12.14□□□□□ -0.47
TRIM56-204ENST00000487252 A0A087X0B3 334 aa12.14□□□□□ -0.47
TRIM56-204ENST00000487252 A0A1W2PQ27 194 aa12.14□□□□□ -0.47
TRIM56-204ENST00000487252 A0A1W2PQ64 194 aa12.14□□□□□ -0.47
TRIM56-204ENST00000487252 A0A1W2PQC6 194 aa12.14□□□□□ -0.47
TRIM56-204ENST00000487252 A0A1W2PQH9 124 aa12.14□□□□□ -0.47
TRIM56-204ENST00000487252 A8MXQ7 604 aa12.14□□□□□ -0.47
TRIM56-204ENST00000487252 FAM13AO94988 1023 aa12.14□□□□□ -0.47
TRIM56-204ENST00000487252 PABPC1P11940 636 aaKnown RBP12.14□□□□□ -0.47
TRIM56-204ENST00000487252 C5AR1P21730 350 aa12.14□□□□□ -0.47
TRIM56-204ENST00000487252 GNLYP22749 145 aa12.14□□□□□ -0.47
TRIM56-204ENST00000487252 DRD3P35462 400 aa12.14□□□□□ -0.47
TRIM56-204ENST00000487252 PRPHP41219 470 aa12.14□□□□□ -0.47
TRIM56-204ENST00000487252 CRTC1Q6UUV9 634 aa12.14□□□□□ -0.47
TRIM56-204ENST00000487252 GPRIN1Q7Z2K8 1008 aa12.14□□□□□ -0.47
TRIM56-204ENST00000487252 B3GNT8Q7Z7M8 397 aa12.14□□□□□ -0.47
TRIM56-204ENST00000487252 DSG4Q86SJ6 1040 aa12.14□□□□□ -0.47
TRIM56-204ENST00000487252 GAS2L3Q86XJ1 694 aa12.14□□□□□ -0.47
TRIM56-204ENST00000487252 DENND1CQ8IV53 801 aa12.14□□□□□ -0.47
TRIM56-204ENST00000487252 KDM1BQ8NB78 822 aa12.14□□□□□ -0.47
TRIM56-204ENST00000487252 HVCN1Q96D96 273 aa12.14□□□□□ -0.47
TRIM56-204ENST00000487252 ANKRD36BP1Q96IX9 119 aa12.14□□□□□ -0.47
TRIM56-204ENST00000487252 MRGPRX3Q96LB0 322 aa12.14□□□□□ -0.47
TRIM56-204ENST00000487252 FOXP1Q9H334 677 aaPredicted RBP12.14□□□□□ -0.47
TRIM56-204ENST00000487252 SALL4Q9UJQ4 1053 aa12.14□□□□□ -0.47
TRIM56-204ENST00000487252 CSNK1G3Q9Y6M4 447 aa12.14□□□□□ -0.47
TRIM56-204ENST00000487252 TARSL2A2RTX5 802 aaKnown RBP12.13□□□□□ -0.47
TRIM56-204ENST00000487252 HHLA1C9JL84 531 aa12.13□□□□□ -0.47
TRIM56-204ENST00000487252 AP1G2O75843 785 aa12.13□□□□□ -0.47
TRIM56-204ENST00000487252 MBD3O95983 291 aa12.13□□□□□ -0.47
TRIM56-204ENST00000487252 ADH1BP00325 375 aa12.13□□□□□ -0.47
TRIM56-204ENST00000487252 LDHAP00338 332 aaKnown RBP12.13□□□□□ -0.47
TRIM56-204ENST00000487252 ZSCAN22P10073 491 aaPredicted RBP12.13□□□□□ -0.47
TRIM56-204ENST00000487252 HGFP14210 728 aa12.13□□□□□ -0.47
TRIM56-204ENST00000487252 MAT2AP31153 395 aaKnown RBP12.13□□□□□ -0.47
TRIM56-204ENST00000487252 MLLT10P55197 1068 aa12.13□□□□□ -0.47
TRIM56-204ENST00000487252 KLRB1Q12918 225 aa12.13□□□□□ -0.47
TRIM56-204ENST00000487252 TRIM29Q14134 588 aa12.13□□□□□ -0.47
TRIM56-204ENST00000487252 SPIDRQ14159 915 aa12.13□□□□□ -0.47
TRIM56-204ENST00000487252 ME3Q16798 604 aa12.13□□□□□ -0.47
TRIM56-204ENST00000487252 MPPE1Q53F39 396 aa12.13□□□□□ -0.47
TRIM56-204ENST00000487252 ZNF720Q7Z2F6 126 aa12.13□□□□□ -0.47
TRIM56-204ENST00000487252 SCD5Q86SK9 330 aa12.13□□□□□ -0.47
TRIM56-204ENST00000487252 ZC3H18Q86VM9 953 aaKnown RBP12.13□□□□□ -0.47
TRIM56-204ENST00000487252 ZFAND4Q86XD8 727 aa12.13□□□□□ -0.47
TRIM56-204ENST00000487252 SLC22A18ASQ8N1D0 253 aa12.13□□□□□ -0.47
TRIM56-204ENST00000487252 GPT2Q8TD30 523 aa12.13□□□□□ -0.47
TRIM56-204ENST00000487252 GTF3C6Q969F1 213 aa12.13□□□□□ -0.47
TRIM56-204ENST00000487252 TTC17Q96AE7 1141 aa12.13□□□□□ -0.47
TRIM56-204ENST00000487252 LMLNQ96KR4 655 aa12.13□□□□□ -0.47
TRIM56-204ENST00000487252 GRPEL1Q9HAV7 217 aa12.13□□□□□ -0.47
TRIM56-204ENST00000487252 GPR27Q9NS67 375 aa12.13□□□□□ -0.47
TRIM56-204ENST00000487252 KRT82Q9NSB4 513 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms