RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 SERPINA13PQ6UXR4 307 aa5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 LRRC8DQ7L1W4 858 aa5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 ADGRF3Q8IZF5 1079 aa5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 CAGE1Q8TC20 777 aa5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 ADAMTS18Q8TE60 1221 aa5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 ZNF845Q96IR2 970 aaPredicted RBP5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 PRRX2Q99811 253 aa5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 PHF7Q9BWX1 381 aaPredicted RBP5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 HDHD5Q9BXW7 423 aa5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 OSBPL5Q9H0X9 879 aaPredicted RBP5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 STN1Q9H668 368 aaKnown RBP5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 SFXN1Q9H9B4 322 aa5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 ASB6Q9NWX5 421 aa5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 IRAK4Q9NWZ3 460 aa5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 MAP3K20Q9NYL2 800 aaKnown RBP5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 SLC17A6Q9P2U8 582 aa5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 ADAM21Q9UKJ8 722 aa5.48□□□□□ -1.53
PRPF38A-203ENST00000487160 B4E171 279 aa5.47□□□□□ -1.53
PRPF38A-203ENST00000487160 WEE2P0C1S8 567 aa5.47□□□□□ -1.53
PRPF38A-203ENST00000487160 TNFRSF1AP19438 455 aa5.47□□□□□ -1.53
PRPF38A-203ENST00000487160 PSMC2P35998 433 aaKnown RBP5.47□□□□□ -1.53
PRPF38A-203ENST00000487160 TSPAN7P41732 249 aa5.47□□□□□ -1.53
PRPF38A-203ENST00000487160 CACNA2D1P54289 1103 aa5.47□□□□□ -1.53
PRPF38A-203ENST00000487160 CASP6P55212 293 aa5.47□□□□□ -1.53
PRPF38A-203ENST00000487160 B4GALNT1Q00973 533 aa5.47□□□□□ -1.53
PRPF38A-203ENST00000487160 GALNT2Q10471 571 aa5.47□□□□□ -1.53
PRPF38A-203ENST00000487160 ALKBH1Q13686 389 aaKnown RBP5.47□□□□□ -1.53
PRPF38A-203ENST00000487160 NFIL3Q16649 462 aa5.47□□□□□ -1.53
PRPF38A-203ENST00000487160 ZXDCQ2QGD7 858 aaPredicted RBP5.47□□□□□ -1.53
PRPF38A-203ENST00000487160 RUNDC3AQ59EK9 446 aa5.47□□□□□ -1.53
PRPF38A-203ENST00000487160 ACAD10Q6JQN1 1059 aa5.47□□□□□ -1.53
PRPF38A-203ENST00000487160 MTFR2Q6P444 385 aa5.47□□□□□ -1.53
PRPF38A-203ENST00000487160 VSTM1Q6UX27 236 aa5.47□□□□□ -1.53
PRPF38A-203ENST00000487160 C1orf122Q6ZSJ8 110 aa5.47□□□□□ -1.53
PRPF38A-203ENST00000487160 AMIGO2Q86SJ2 522 aa5.47□□□□□ -1.53
PRPF38A-203ENST00000487160 Q8N1X5 172 aa5.47□□□□□ -1.53
PRPF38A-203ENST00000487160 GALNT4Q8N4A0 578 aa5.47□□□□□ -1.53
PRPF38A-203ENST00000487160 HDAC2Q92769 488 aaKnown RBP5.47□□□□□ -1.53
PRPF38A-203ENST00000487160 ZBTB10Q96DT7 871 aa5.47□□□□□ -1.53
PRPF38A-203ENST00000487160 HIC2Q96JB3 615 aa5.47□□□□□ -1.53
PRPF38A-203ENST00000487160 UROC1Q96N76 676 aa5.47□□□□□ -1.53
PRPF38A-203ENST00000487160 TIMP4Q99727 224 aa5.47□□□□□ -1.53
PRPF38A-203ENST00000487160 TAOK3Q9H2K8 898 aa5.47□□□□□ -1.53
PRPF38A-203ENST00000487160 SLC22A11Q9NSA0 550 aa5.47□□□□□ -1.53
PRPF38A-203ENST00000487160 KLQ9UEF7 1012 aa5.47□□□□□ -1.53
PRPF38A-203ENST00000487160 CYP46A1Q9Y6A2 500 aa5.47□□□□□ -1.53
PRPF38A-203ENST00000487160 ABCC2Q92887 1545 aa5.47□□□□□ -1.53
PRPF38A-203ENST00000487160 TARM1B6A8C7 271 aa5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 BTBD19C9JJ37 291 aa5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 H7C1Q1 480 aa5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 CNTN5O94779 1100 aa5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 TBX18O95935 607 aa5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 RFPL3SP0C7P2 107 aa5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 ARSAP15289 507 aa5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 DMWDQ09019 674 aa5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 TDGQ13569 410 aa5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 KPNB1Q14974 876 aaKnown RBP5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 GPR68Q15743 365 aa5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 BAK1Q16611 211 aa5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 TBC1D1Q86TI0 1168 aaPredicted RBP5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 VPS52Q8N1B4 723 aa5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 ENDOVQ8N8Q3 282 aaKnown RBP5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 ADPRHL1Q8NDY3 354 aa5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 RFFLQ8WZ73 363 aa5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 CELF1Q92879 486 aaKnown RBP5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 RNF125Q96EQ8 232 aa5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 RNFT2Q96EX2 444 aa5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 APOPT1Q96IL0 206 aa5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 FYTTD1Q96QD9 318 aaKnown RBP5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 SENP7Q9BQF6 1050 aa5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 ABHD14AQ9BUJ0 271 aa5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 DUSP26Q9BV47 211 aa5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 TRIM31Q9BZY9 425 aa5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 TRIM2Q9C040 744 aa5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 CTDSP1Q9GZU7 261 aa5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 NUAK2Q9H093 628 aa5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 KLK15Q9H2R5 256 aa5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 SYNPO2LQ9H987 977 aa5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 CNOT7Q9UIV1 285 aaKnown RBP5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 CD207Q9UJ71 328 aa5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 SUFUQ9UMX1 484 aa5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 SIRT4Q9Y6E7 314 aaPredicted RBP5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 POLR2AP24928 1970 aaKnown RBP5.46□□□□□ -1.54
PRPF38A-203ENST00000487160 ZCCHC11Q5TAX3 1644 aaKnown RBP5.45□□□□□ -1.54
PRPF38A-203ENST00000487160 SH2D7A6NKC9 451 aaPredicted RBP5.45□□□□□ -1.54
PRPF38A-203ENST00000487160 PRRG2O14669 202 aa5.45□□□□□ -1.54
PRPF38A-203ENST00000487160 DSCR3O14972 297 aa5.45□□□□□ -1.54
PRPF38A-203ENST00000487160 SYN3O14994 580 aa5.45□□□□□ -1.54
PRPF38A-203ENST00000487160 ENO1P06733 434 aaKnown RBP5.45□□□□□ -1.54
PRPF38A-203ENST00000487160 C6P13671 934 aa5.45□□□□□ -1.54
PRPF38A-203ENST00000487160 WT1P19544 449 aaPredicted RBP5.45□□□□□ -1.54
PRPF38A-203ENST00000487160 TACR2P21452 398 aa5.45□□□□□ -1.54
PRPF38A-203ENST00000487160 PRKCHP24723 683 aa5.45□□□□□ -1.54
PRPF38A-203ENST00000487160 RXRGP48443 463 aa5.45□□□□□ -1.54
PRPF38A-203ENST00000487160 MVDP53602 400 aa5.45□□□□□ -1.54
PRPF38A-203ENST00000487160 SOX10P56693 466 aa5.45□□□□□ -1.54
PRPF38A-203ENST00000487160 RPP30P78346 268 aaKnown RBP5.45□□□□□ -1.54
PRPF38A-203ENST00000487160 TBL3Q12788 808 aaKnown RBP5.45□□□□□ -1.54
PRPF38A-203ENST00000487160 PFKFB3Q16875 520 aaPredicted RBP5.45□□□□□ -1.54
PRPF38A-203ENST00000487160 HYIQ5T013 277 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms