RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 PIK3R6Q5UE93 754 aa11.94□□□□□ -0.5
PRKCB-207ENST00000486868 PSRC1Q6PGN9 363 aaPredicted RBP11.94□□□□□ -0.5
PRKCB-207ENST00000486868 C3orf62Q6ZUJ4 267 aa11.94□□□□□ -0.5
PRKCB-207ENST00000486868 CAND1Q86VP6 1230 aaKnown RBP11.94□□□□□ -0.5
PRKCB-207ENST00000486868 ARHGAP12Q8IWW6 846 aa11.94□□□□□ -0.5
PRKCB-207ENST00000486868 ZNF567Q8N184 647 aa11.94□□□□□ -0.5
PRKCB-207ENST00000486868 FIBCD1Q8N539 461 aa11.94□□□□□ -0.5
PRKCB-207ENST00000486868 SH2D3CQ8N5H7 860 aa11.94□□□□□ -0.5
PRKCB-207ENST00000486868 NPWQ8N729 165 aa11.94□□□□□ -0.5
PRKCB-207ENST00000486868 FBXO36Q8NEA4 188 aa11.94□□□□□ -0.5
PRKCB-207ENST00000486868 ZSCAN18Q8TBC5 510 aaPredicted RBP11.94□□□□□ -0.5
PRKCB-207ENST00000486868 SP7Q8TDD2 431 aaPredicted RBP11.94□□□□□ -0.5
PRKCB-207ENST00000486868 PLD4Q96BZ4 506 aa11.94□□□□□ -0.5
PRKCB-207ENST00000486868 TEKT5Q96M29 485 aa11.94□□□□□ -0.5
PRKCB-207ENST00000486868 IL12RB2Q99665 862 aa11.94□□□□□ -0.5
PRKCB-207ENST00000486868 PRMT1Q99873 361 aaKnown RBP11.94□□□□□ -0.5
PRKCB-207ENST00000486868 DHRS4Q9BTZ2 278 aa11.94□□□□□ -0.5
PRKCB-207ENST00000486868 ZYG11BQ9C0D3 744 aa11.94□□□□□ -0.5
PRKCB-207ENST00000486868 GBA3Q9H227 469 aa11.94□□□□□ -0.5
PRKCB-207ENST00000486868 CENPHQ9H3R5 247 aa11.94□□□□□ -0.5
PRKCB-207ENST00000486868 DNAJC17Q9NVM6 304 aaKnown RBP11.94□□□□□ -0.5
PRKCB-207ENST00000486868 TRPM5Q9NZQ8 1165 aa11.94□□□□□ -0.5
PRKCB-207ENST00000486868 BCCIPQ9P287 314 aaKnown RBP eCLIP11.94□□□□□ -0.5
PRKCB-207ENST00000486868 PRKAG2Q9UGJ0 569 aa11.94□□□□□ -0.5
PRKCB-207ENST00000486868 INSL6Q9Y581 213 aa11.94□□□□□ -0.5
PRKCB-207ENST00000486868 EXOC1LA0A1B0GW35 172 aa11.93□□□□□ -0.5
PRKCB-207ENST00000486868 SLC12A8A0AV02 714 aa11.93□□□□□ -0.5
PRKCB-207ENST00000486868 TLDC2A0PJX2 215 aa11.93□□□□□ -0.5
PRKCB-207ENST00000486868 MATN3O15232 486 aa11.93□□□□□ -0.5
PRKCB-207ENST00000486868 FAM155BO75949 473 aa11.93□□□□□ -0.5
PRKCB-207ENST00000486868 MAP3K6O95382 1288 aa11.93□□□□□ -0.5
PRKCB-207ENST00000486868 SEC24AO95486 1093 aa11.93□□□□□ -0.5
PRKCB-207ENST00000486868 PFKLP17858 780 aa11.93□□□□□ -0.5
PRKCB-207ENST00000486868 ELF1P32519 619 aa11.93□□□□□ -0.5
PRKCB-207ENST00000486868 STX2P32856 288 aa11.93□□□□□ -0.5
PRKCB-207ENST00000486868 MDH1P40925 334 aaKnown RBP11.93□□□□□ -0.5
PRKCB-207ENST00000486868 MAPKAPK2P49137 400 aa11.93□□□□□ -0.5
PRKCB-207ENST00000486868 GYS2P54840 703 aa11.93□□□□□ -0.5
PRKCB-207ENST00000486868 NRLP54845 237 aa11.93□□□□□ -0.5
PRKCB-207ENST00000486868 GEMIN4P57678 1058 aaKnown RBP11.93□□□□□ -0.5
PRKCB-207ENST00000486868 YBEYP58557 167 aaPredicted RBP11.93□□□□□ -0.5
PRKCB-207ENST00000486868 FRG1Q14331 258 aaKnown RBP11.93□□□□□ -0.5
PRKCB-207ENST00000486868 FASTKD3Q14CZ7 662 aaKnown RBP11.93□□□□□ -0.5
PRKCB-207ENST00000486868 ANO4Q32M45 955 aa11.93□□□□□ -0.5
PRKCB-207ENST00000486868 PABPC1LQ4VXU2 614 aaKnown RBP11.93□□□□□ -0.5
PRKCB-207ENST00000486868 MS4A13Q5J8X5 152 aa11.93□□□□□ -0.5
PRKCB-207ENST00000486868 HECTD3Q5T447 861 aa11.93□□□□□ -0.5
PRKCB-207ENST00000486868 UBAP2Q5T6F2 1119 aaKnown RBP11.93□□□□□ -0.5
PRKCB-207ENST00000486868 RWDD4Q6NW29 188 aaKnown RBP11.93□□□□□ -0.5
PRKCB-207ENST00000486868 C16orf59Q7L2K0 433 aa11.93□□□□□ -0.5
PRKCB-207ENST00000486868 PID1Q7Z2X4 250 aa11.93□□□□□ -0.5
PRKCB-207ENST00000486868 ITIH5Q86UX2 942 aa11.93□□□□□ -0.5
PRKCB-207ENST00000486868 EPS8L3Q8TE67 593 aaKnown RBP11.93□□□□□ -0.5
PRKCB-207ENST00000486868 HERVK_113Q902F9 699 aa11.93□□□□□ -0.5
PRKCB-207ENST00000486868 MAML1Q92585 1016 aa11.93□□□□□ -0.5
PRKCB-207ENST00000486868 SIGLEC10Q96LC7 697 aa11.93□□□□□ -0.5
PRKCB-207ENST00000486868 CYTH2Q99418 400 aa11.93□□□□□ -0.5
PRKCB-207ENST00000486868 EBNA1BP2Q99848 306 aaKnown RBP11.93□□□□□ -0.5
PRKCB-207ENST00000486868 SIK2Q9H0K1 926 aa11.93□□□□□ -0.5
PRKCB-207ENST00000486868 ZBP1Q9H171 429 aa11.93□□□□□ -0.5
PRKCB-207ENST00000486868 VPS37BQ9H9H4 285 aa11.93□□□□□ -0.5
PRKCB-207ENST00000486868 KLHL8Q9P2G9 620 aaPredicted RBP11.93□□□□□ -0.5
PRKCB-207ENST00000486868 RABGEF1Q9UJ41 708 aa11.93□□□□□ -0.5
PRKCB-207ENST00000486868 RWDD3Q9Y3V2 267 aa11.93□□□□□ -0.5
PRKCB-207ENST00000486868 YIPF1Q9Y548 306 aa11.93□□□□□ -0.5
PRKCB-207ENST00000486868 IRAK3Q9Y616 596 aa11.93□□□□□ -0.5
PRKCB-207ENST00000486868 SDR42E2A6NKP2 422 aa11.92□□□□□ -0.5
PRKCB-207ENST00000486868 GOLGA8MH3BSY2 632 aa11.92□□□□□ -0.5
PRKCB-207ENST00000486868 SOAT2O75908 522 aa11.92□□□□□ -0.5
PRKCB-207ENST00000486868 AP2A1O95782 977 aa11.92□□□□□ -0.5
PRKCB-207ENST00000486868 LINC00271P0C7V0 271 aa11.92□□□□□ -0.5
PRKCB-207ENST00000486868 SRGAP2BP0DMP2 458 aa11.92□□□□□ -0.5
PRKCB-207ENST00000486868 HSPA1AP0DMV8 641 aaKnown RBP11.92□□□□□ -0.5
PRKCB-207ENST00000486868 HSPA1BP0DMV9 641 aaKnown RBP11.92□□□□□ -0.5
PRKCB-207ENST00000486868 PRKCHP24723 683 aa11.92□□□□□ -0.5
PRKCB-207ENST00000486868 ELK3P41970 407 aa11.92□□□□□ -0.5
PRKCB-207ENST00000486868 LMAN1P49257 510 aa11.92□□□□□ -0.5
PRKCB-207ENST00000486868 EPHB3P54753 998 aa11.92□□□□□ -0.5
PRKCB-207ENST00000486868 FPGSQ05932 587 aa11.92□□□□□ -0.5
PRKCB-207ENST00000486868 PRPSAP1Q14558 356 aa11.92□□□□□ -0.5
PRKCB-207ENST00000486868 LONRF1Q17RB8 773 aa11.92□□□□□ -0.5
PRKCB-207ENST00000486868 STEAP4Q687X5 459 aa11.92□□□□□ -0.5
PRKCB-207ENST00000486868 KCTD11Q693B1 232 aa11.92□□□□□ -0.5
PRKCB-207ENST00000486868 ADGRD1Q6QNK2 874 aa11.92□□□□□ -0.5
PRKCB-207ENST00000486868 B4GALNT4Q76KP1 1039 aa11.92□□□□□ -0.5
PRKCB-207ENST00000486868 ZNF534Q76KX8 674 aa11.92□□□□□ -0.5
PRKCB-207ENST00000486868 C14orf80Q86SX3 495 aa11.92□□□□□ -0.5
PRKCB-207ENST00000486868 CCDC117Q8IWD4 279 aaPredicted RBP11.92□□□□□ -0.5
PRKCB-207ENST00000486868 ATPAF2Q8N5M1 289 aa11.92□□□□□ -0.5
PRKCB-207ENST00000486868 GIPC2Q8TF65 315 aa11.92□□□□□ -0.5
PRKCB-207ENST00000486868 ARHGEF2Q92974 986 aaKnown RBP11.92□□□□□ -0.5
PRKCB-207ENST00000486868 PSMG2Q969U7 264 aa11.92□□□□□ -0.5
PRKCB-207ENST00000486868 FCRL5Q96RD9 977 aa11.92□□□□□ -0.5
PRKCB-207ENST00000486868 RAD9AQ99638 391 aa11.92□□□□□ -0.5
PRKCB-207ENST00000486868 DDX50Q9BQ39 737 aaKnown RBP11.92□□□□□ -0.5
PRKCB-207ENST00000486868 WDR83Q9BRX9 315 aaKnown RBP11.92□□□□□ -0.5
PRKCB-207ENST00000486868 CYP4F11Q9HBI6 524 aa11.92□□□□□ -0.5
PRKCB-207ENST00000486868 SSU72Q9NP77 194 aaKnown RBP11.92□□□□□ -0.5
PRKCB-207ENST00000486868 PRDM10Q9NQV6 1147 aa11.92□□□□□ -0.5
PRKCB-207ENST00000486868 PSMC3IPQ9P2W1 217 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms