RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 SDHAF4Q5VUM1 108 aa15.03■□□□□ -0
POLR2J3-204ENST00000486319 MSANTD2Q6P1R3 559 aa15.03■□□□□ -0
POLR2J3-204ENST00000486319 GRASPQ7Z6J2 395 aaPredicted RBP15.03■□□□□ -0
POLR2J3-204ENST00000486319 TCEAL8Q8IYN2 117 aa15.03■□□□□ -0
POLR2J3-204ENST00000486319 PLCD3Q8N3E9 789 aa15.03■□□□□ -0
POLR2J3-204ENST00000486319 FERMT1Q9BQL6 677 aa15.03■□□□□ -0
POLR2J3-204ENST00000486319 PHACTR1Q9C0D0 580 aa15.03■□□□□ -0
POLR2J3-204ENST00000486319 EPB41L4BQ9H329 900 aa15.03■□□□□ -0
POLR2J3-204ENST00000486319 CDC42EP4Q9H3Q1 356 aaKnown RBP15.03■□□□□ -0
POLR2J3-204ENST00000486319 NMUR1Q9HB89 426 aa15.03■□□□□ -0
POLR2J3-204ENST00000486319 DTLQ9NZJ0 730 aa15.03■□□□□ -0
POLR2J3-204ENST00000486319 SLC27A5Q9Y2P5 690 aa15.03■□□□□ -0
POLR2J3-204ENST00000486319 CLUHO75153 1309 aa15.03■□□□□ -0
POLR2J3-204ENST00000486319 SEC24AO95486 1093 aa15.02■□□□□ -0
POLR2J3-204ENST00000486319 LRG1P02750 347 aa15.02■□□□□ -0
POLR2J3-204ENST00000486319 MYZAPP0CAP1 466 aa15.02■□□□□ -0
POLR2J3-204ENST00000486319 HTR7P34969 479 aa15.02■□□□□ -0
POLR2J3-204ENST00000486319 TUFMP49411 452 aaKnown RBP15.02■□□□□ -0
POLR2J3-204ENST00000486319 ZNF844Q08AG5 666 aa15.02■□□□□ -0
POLR2J3-204ENST00000486319 SLC10A2Q12908 348 aaPredicted RBP15.02■□□□□ -0
POLR2J3-204ENST00000486319 DUSP4Q13115 394 aa15.02■□□□□ -0
POLR2J3-204ENST00000486319 SLC29A2Q14542 456 aa15.02■□□□□ -0
POLR2J3-204ENST00000486319 PDK1Q15118 436 aa15.02■□□□□ -0
POLR2J3-204ENST00000486319 TTC9BQ8N6N2 239 aa15.02■□□□□ -0
POLR2J3-204ENST00000486319 PRCCQ92733 491 aaPredicted RBP15.02■□□□□ -0
POLR2J3-204ENST00000486319 FBXO32Q969P5 355 aa15.02■□□□□ -0
POLR2J3-204ENST00000486319 OLFM3Q96PB7 478 aa15.02■□□□□ -0
POLR2J3-204ENST00000486319 QKIQ96PU8 341 aaKnown RBP eCLIP15.02■□□□□ -0
POLR2J3-204ENST00000486319 HAPLN3Q96S86 360 aa15.02■□□□□ -0
POLR2J3-204ENST00000486319 ANLNQ9NQW6 1124 aa15.02■□□□□ -0
POLR2J3-204ENST00000486319 TLR8Q9NR97 1041 aaKnown RBP15.02■□□□□ -0
POLR2J3-204ENST00000486319 OLA1Q9NTK5 396 aaKnown RBP15.02■□□□□ -0
POLR2J3-204ENST00000486319 ETNK2Q9NVF9 386 aa15.02■□□□□ -0
POLR2J3-204ENST00000486319 CLIC5Q9NZA1 410 aa15.02■□□□□ -0
POLR2J3-204ENST00000486319 HSFX1Q9UBD0 423 aa15.02■□□□□ -0
POLR2J3-204ENST00000486319 OR12D3Q9UGF7 316 aa15.02■□□□□ -0
POLR2J3-204ENST00000486319 LIMD1Q9UGP4 676 aa15.02■□□□□ -0
POLR2J3-204ENST00000486319 GOLGA6CA6NDK9 693 aa15.02□□□□□ -0.01
POLR2J3-204ENST00000486319 I6L893 689 aaPredicted RBP15.02□□□□□ -0.01
POLR2J3-204ENST00000486319 PPP1R12AO14974 1030 aaPredicted RBP15.02□□□□□ -0.01
POLR2J3-204ENST00000486319 DCLK1O15075 740 aa15.02□□□□□ -0.01
POLR2J3-204ENST00000486319 VNN2O95498 520 aa15.02□□□□□ -0.01
POLR2J3-204ENST00000486319 TTC4O95801 387 aa15.02□□□□□ -0.01
POLR2J3-204ENST00000486319 POU2F2P09086 479 aa15.02□□□□□ -0.01
POLR2J3-204ENST00000486319 GOLGA6DP0CG33 693 aa15.02□□□□□ -0.01
POLR2J3-204ENST00000486319 ERCC2P18074 760 aa15.02□□□□□ -0.01
POLR2J3-204ENST00000486319 USP46P62068 366 aa15.02□□□□□ -0.01
POLR2J3-204ENST00000486319 GABPB1Q06547 395 aaPredicted RBP15.02□□□□□ -0.01
POLR2J3-204ENST00000486319 HEATR6Q6AI08 1181 aaKnown RBP15.02□□□□□ -0.01
POLR2J3-204ENST00000486319 CENPUQ71F23 418 aa15.02□□□□□ -0.01
POLR2J3-204ENST00000486319 NAT8LQ8N9F0 302 aa15.02□□□□□ -0.01
POLR2J3-204ENST00000486319 TFB1MQ8WVM0 346 aaKnown RBP15.02□□□□□ -0.01
POLR2J3-204ENST00000486319 CPT1BQ92523 772 aa15.02□□□□□ -0.01
POLR2J3-204ENST00000486319 RBM15Q96T37 977 aaKnown RBP eCLIP15.02□□□□□ -0.01
POLR2J3-204ENST00000486319 C1QTNF1Q9BXJ1 281 aa15.02□□□□□ -0.01
POLR2J3-204ENST00000486319 TMBIM4Q9HC24 238 aa15.02□□□□□ -0.01
POLR2J3-204ENST00000486319 GOLGA6AQ9NYA3 693 aa15.02□□□□□ -0.01
POLR2J3-204ENST00000486319 GMIPQ9P107 970 aa15.02□□□□□ -0.01
POLR2J3-204ENST00000486319 SFMBT1Q9UHJ3 866 aa15.02□□□□□ -0.01
POLR2J3-204ENST00000486319 HMGB1P1B2RPK0 211 aaPredicted RBP15.01□□□□□ -0.01
POLR2J3-204ENST00000486319 FAM72CH0Y354 149 aa15.01□□□□□ -0.01
POLR2J3-204ENST00000486319 NCAM2O15394 837 aa15.01□□□□□ -0.01
POLR2J3-204ENST00000486319 MFSD11O43934 449 aa15.01□□□□□ -0.01
POLR2J3-204ENST00000486319 SLC2A3P11169 496 aa15.01□□□□□ -0.01
POLR2J3-204ENST00000486319 FSHRP23945 695 aa15.01□□□□□ -0.01
POLR2J3-204ENST00000486319 GBP2P32456 591 aaPredicted RBP15.01□□□□□ -0.01
POLR2J3-204ENST00000486319 SERPINB6P35237 376 aa15.01□□□□□ -0.01
POLR2J3-204ENST00000486319 BASP1P80723 227 aaKnown RBP15.01□□□□□ -0.01
POLR2J3-204ENST00000486319 FAM72AQ5TYM5 149 aa15.01□□□□□ -0.01
POLR2J3-204ENST00000486319 FAM72DQ6L9T8 149 aa15.01□□□□□ -0.01
POLR2J3-204ENST00000486319 FAM72BQ86X60 149 aa15.01□□□□□ -0.01
POLR2J3-204ENST00000486319 OR2W6PQ8NHA6 318 aa15.01□□□□□ -0.01
POLR2J3-204ENST00000486319 ARL8AQ96BM9 186 aa15.01□□□□□ -0.01
POLR2J3-204ENST00000486319 TTC25Q96NG3 672 aa15.01□□□□□ -0.01
POLR2J3-204ENST00000486319 CRISPLD1Q9H336 500 aa15.01□□□□□ -0.01
POLR2J3-204ENST00000486319 OSER1Q9NX31 292 aa15.01□□□□□ -0.01
POLR2J3-204ENST00000486319 TLR6Q9Y2C9 796 aa15.01□□□□□ -0.01
POLR2J3-204ENST00000486319 INSL5Q9Y5Q6 135 aa15.01□□□□□ -0.01
POLR2J3-204ENST00000486319 NUP205Q92621 2012 aa15□□□□□ -0.01
POLR2J3-204ENST00000486319 SHROOM3Q8TF72 1996 aa15□□□□□ -0.01
POLR2J3-204ENST00000486319 C5orf60A6NFR6 353 aa15□□□□□ -0.01
POLR2J3-204ENST00000486319 SLC38A8A6NNN8 435 aa15□□□□□ -0.01
POLR2J3-204ENST00000486319 CHADO15335 359 aa15□□□□□ -0.01
POLR2J3-204ENST00000486319 EIF3HO15372 352 aaKnown RBP eCLIP15□□□□□ -0.01
POLR2J3-204ENST00000486319 GCATO75600 419 aa15□□□□□ -0.01
POLR2J3-204ENST00000486319 SOAT2O75908 522 aa15□□□□□ -0.01
POLR2J3-204ENST00000486319 STK10O94804 968 aaKnown RBP15□□□□□ -0.01
POLR2J3-204ENST00000486319 LRIG2O94898 1065 aa15□□□□□ -0.01
POLR2J3-204ENST00000486319 MAP3K6O95382 1288 aa15□□□□□ -0.01
POLR2J3-204ENST00000486319 MAGEA4P43358 317 aa15□□□□□ -0.01
POLR2J3-204ENST00000486319 PGFP49763 221 aa15□□□□□ -0.01
POLR2J3-204ENST00000486319 ARL4CP56559 192 aa15□□□□□ -0.01
POLR2J3-204ENST00000486319 NTHL1P78549 312 aa15□□□□□ -0.01
POLR2J3-204ENST00000486319 TWF1Q12792 350 aa15□□□□□ -0.01
POLR2J3-204ENST00000486319 TAF10Q12962 218 aa15□□□□□ -0.01
POLR2J3-204ENST00000486319 HIF1AQ16665 826 aa15□□□□□ -0.01
POLR2J3-204ENST00000486319 PABPC1LQ4VXU2 614 aaKnown RBP15□□□□□ -0.01
POLR2J3-204ENST00000486319 TTMPQ5BVD1 217 aa15□□□□□ -0.01
POLR2J3-204ENST00000486319 PPP1R21Q6ZMI0 780 aa15□□□□□ -0.01
POLR2J3-204ENST00000486319 B4GALNT4Q76KP1 1039 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms