RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 ADAM33Q9BZ11 813 aa19■□□□□ 0.63
PRPF40A-209ENST00000486100 WDCPQ9H6R7 721 aa19■□□□□ 0.63
PRPF40A-209ENST00000486100 NLRC4Q9NPP4 1024 aa19■□□□□ 0.63
PRPF40A-209ENST00000486100 PIGVQ9NUD9 493 aa19■□□□□ 0.63
PRPF40A-209ENST00000486100 SUSD2Q9UGT4 822 aa19■□□□□ 0.63
PRPF40A-209ENST00000486100 NOCTQ9UK39 431 aaKnown RBP19■□□□□ 0.63
PRPF40A-209ENST00000486100 A0A1B0GVM2 712 aa18.99■□□□□ 0.63
PRPF40A-209ENST00000486100 TCAF2A6NFQ2 919 aa18.99■□□□□ 0.63
PRPF40A-209ENST00000486100 LGALS16A8MUM7 142 aa18.99■□□□□ 0.63
PRPF40A-209ENST00000486100 PAGE1O75459 146 aa18.99■□□□□ 0.63
PRPF40A-209ENST00000486100 KCNK5O95279 499 aa18.99■□□□□ 0.63
PRPF40A-209ENST00000486100 DNTTP04053 509 aa18.99■□□□□ 0.63
PRPF40A-209ENST00000486100 GNSP15586 552 aa18.99■□□□□ 0.63
PRPF40A-209ENST00000486100 ZNF18P17022 549 aa18.99■□□□□ 0.63
PRPF40A-209ENST00000486100 KCNA4P22459 653 aa18.99■□□□□ 0.63
PRPF40A-209ENST00000486100 STAT1P42224 750 aa18.99■□□□□ 0.63
PRPF40A-209ENST00000486100 CTSOP43234 321 aaPredicted RBP18.99■□□□□ 0.63
PRPF40A-209ENST00000486100 SULT1E1P49888 294 aa18.99■□□□□ 0.63
PRPF40A-209ENST00000486100 PLK1P53350 603 aa18.99■□□□□ 0.63
PRPF40A-209ENST00000486100 OXCT1P55809 520 aa18.99■□□□□ 0.63
PRPF40A-209ENST00000486100 CDR2Q01850 454 aa18.99■□□□□ 0.63
PRPF40A-209ENST00000486100 SYCP1Q15431 976 aa18.99■□□□□ 0.63
PRPF40A-209ENST00000486100 SLC25A52Q3SY17 297 aa18.99■□□□□ 0.63
PRPF40A-209ENST00000486100 C2CD6Q53TS8 623 aa18.99■□□□□ 0.63
PRPF40A-209ENST00000486100 BRMS1LQ5PSV4 323 aa18.99■□□□□ 0.63
PRPF40A-209ENST00000486100 NAA35Q5VZE5 725 aa18.99■□□□□ 0.63
PRPF40A-209ENST00000486100 SND1Q7KZF4 910 aaKnown RBP eCLIP18.99■□□□□ 0.63
PRPF40A-209ENST00000486100 FAM124AQ86V42 546 aa18.99■□□□□ 0.63
PRPF40A-209ENST00000486100 CIR1Q86X95 450 aaPredicted RBP18.99■□□□□ 0.63
PRPF40A-209ENST00000486100 SLC20A1Q8WUM9 679 aa18.99■□□□□ 0.63
PRPF40A-209ENST00000486100 SPAG5Q96R06 1193 aa18.99■□□□□ 0.63
PRPF40A-209ENST00000486100 PPP1R9BQ96SB3 815 aa18.99■□□□□ 0.63
PRPF40A-209ENST00000486100 TKTL2Q9H0I9 626 aa18.99■□□□□ 0.63
PRPF40A-209ENST00000486100 PCED1AQ9H1Q7 454 aa18.99■□□□□ 0.63
PRPF40A-209ENST00000486100 MTG2Q9H4K7 406 aa18.99■□□□□ 0.63
PRPF40A-209ENST00000486100 ARHGEF38Q9NXL2 777 aa18.99■□□□□ 0.63
PRPF40A-209ENST00000486100 SLCO3A1Q9UIG8 710 aa18.99■□□□□ 0.63
PRPF40A-209ENST00000486100 VANGL2Q9ULK5 521 aa18.99■□□□□ 0.63
PRPF40A-209ENST00000486100 NUP205Q92621 2012 aa18.98■□□□□ 0.63
PRPF40A-209ENST00000486100 TARSL2A2RTX5 802 aaKnown RBP18.98■□□□□ 0.63
PRPF40A-209ENST00000486100 MEI4A8MW99 385 aa18.98■□□□□ 0.63
PRPF40A-209ENST00000486100 ARHGAP33O14559 1287 aa18.98■□□□□ 0.63
PRPF40A-209ENST00000486100 ADCY5O95622 1261 aa18.98■□□□□ 0.63
PRPF40A-209ENST00000486100 CYP1A1P04798 512 aaPredicted RBP18.98■□□□□ 0.63
PRPF40A-209ENST00000486100 PDGFRAP16234 1089 aa18.98■□□□□ 0.63
PRPF40A-209ENST00000486100 TFE3P19532 575 aaPredicted RBP18.98■□□□□ 0.63
PRPF40A-209ENST00000486100 MAPK8P45983 427 aa18.98■□□□□ 0.63
PRPF40A-209ENST00000486100 ATXN3P54252 364 aaPredicted RBP18.98■□□□□ 0.63
PRPF40A-209ENST00000486100 UBXN1Q04323 297 aa18.98■□□□□ 0.63
PRPF40A-209ENST00000486100 DEUP1Q05D60 604 aa18.98■□□□□ 0.63
PRPF40A-209ENST00000486100 TYRO3Q06418 890 aa18.98■□□□□ 0.63
PRPF40A-209ENST00000486100 SULT2A1Q06520 285 aa18.98■□□□□ 0.63
PRPF40A-209ENST00000486100 UAP1L1Q3KQV9 507 aa18.98■□□□□ 0.63
PRPF40A-209ENST00000486100 C5orf22Q49AR2 442 aa18.98■□□□□ 0.63
PRPF40A-209ENST00000486100 C9orf64Q5T6V5 341 aa18.98■□□□□ 0.63
PRPF40A-209ENST00000486100 DCAF12L1Q5VU92 463 aa18.98■□□□□ 0.63
PRPF40A-209ENST00000486100 RNF219Q5W0B1 726 aaPredicted RBP18.98■□□□□ 0.63
PRPF40A-209ENST00000486100 ZNF776Q68DI1 518 aaPredicted RBP18.98■□□□□ 0.63
PRPF40A-209ENST00000486100 ARCQ7LC44 396 aa18.98■□□□□ 0.63
PRPF40A-209ENST00000486100 C14orf80Q86SX3 495 aa18.98■□□□□ 0.63
PRPF40A-209ENST00000486100 NEK11Q8NG66 645 aa18.98■□□□□ 0.63
PRPF40A-209ENST00000486100 PCMTD1Q96MG8 357 aaPredicted RBP18.98■□□□□ 0.63
PRPF40A-209ENST00000486100 TBCBQ99426 244 aa18.98■□□□□ 0.63
PRPF40A-209ENST00000486100 SIK2Q9H0K1 926 aa18.98■□□□□ 0.63
PRPF40A-209ENST00000486100 RSPH9Q9H1X1 276 aaPredicted RBP18.98■□□□□ 0.63
PRPF40A-209ENST00000486100 HSD3B7Q9H2F3 369 aa18.98■□□□□ 0.63
PRPF40A-209ENST00000486100 FSCN3Q9NQT6 498 aa18.98■□□□□ 0.63
PRPF40A-209ENST00000486100 TMEM63CQ9P1W3 806 aa18.98■□□□□ 0.63
PRPF40A-209ENST00000486100 TMEM59LQ9UK28 342 aa18.98■□□□□ 0.63
PRPF40A-209ENST00000486100 SCML1Q9UN30 329 aa18.98■□□□□ 0.63
PRPF40A-209ENST00000486100 PAXBP1Q9Y5B6 917 aa18.98■□□□□ 0.63
PRPF40A-209ENST00000486100 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.97■□□□□ 0.63
PRPF40A-209ENST00000486100 FAM170AA1A519 330 aa18.97■□□□□ 0.63
PRPF40A-209ENST00000486100 TTC34A8MYJ7 566 aa18.97■□□□□ 0.63
PRPF40A-209ENST00000486100 GOLGA8SH3BPF8 625 aa18.97■□□□□ 0.63
PRPF40A-209ENST00000486100 RNASEH1O60930 286 aaKnown RBP18.97■□□□□ 0.63
PRPF40A-209ENST00000486100 SIN3BO75182 1162 aa18.97■□□□□ 0.63
PRPF40A-209ENST00000486100 CLDN11O75508 207 aa18.97■□□□□ 0.63
PRPF40A-209ENST00000486100 SYPP08247 313 aa18.97■□□□□ 0.63
PRPF40A-209ENST00000486100 CHRNB2P17787 502 aa18.97■□□□□ 0.63
PRPF40A-209ENST00000486100 MZF1P28698 734 aaPredicted RBP18.97■□□□□ 0.63
PRPF40A-209ENST00000486100 ACSL1P33121 698 aa18.97■□□□□ 0.63
PRPF40A-209ENST00000486100 FLT3P36888 993 aa18.97■□□□□ 0.63
PRPF40A-209ENST00000486100 NNMTP40261 264 aa18.97■□□□□ 0.63
PRPF40A-209ENST00000486100 FMO1Q01740 532 aa18.97■□□□□ 0.63
PRPF40A-209ENST00000486100 ZNF177Q13360 481 aaPredicted RBP18.97■□□□□ 0.63
PRPF40A-209ENST00000486100 N4BP2L1Q5TBK1 243 aaPredicted RBP18.97■□□□□ 0.63
PRPF40A-209ENST00000486100 CXorf57Q6NSI4 855 aaKnown RBP18.97■□□□□ 0.63
PRPF40A-209ENST00000486100 APTXQ7Z2E3 356 aaKnown RBP18.97■□□□□ 0.63
PRPF40A-209ENST00000486100 DHX40Q8IX18 779 aaKnown RBP18.97■□□□□ 0.63
PRPF40A-209ENST00000486100 RPL10LQ96L21 214 aaKnown RBP18.97■□□□□ 0.63
PRPF40A-209ENST00000486100 C1orf74Q96LT6 269 aa18.97■□□□□ 0.63
PRPF40A-209ENST00000486100 ERGIC2Q96RQ1 377 aa18.97■□□□□ 0.63
PRPF40A-209ENST00000486100 GTPBP2Q9BX10 602 aaKnown RBP18.97■□□□□ 0.63
PRPF40A-209ENST00000486100 NAT10Q9H0A0 1025 aaKnown RBP18.97■□□□□ 0.63
PRPF40A-209ENST00000486100 BTBD1Q9H0C5 482 aa18.97■□□□□ 0.63
PRPF40A-209ENST00000486100 ANLNQ9NQW6 1124 aa18.97■□□□□ 0.63
PRPF40A-209ENST00000486100 LAMA1P25391 3075 aa18.97■□□□□ 0.63
PRPF40A-209ENST00000486100 ITIH6Q6UXX5 1313 aa18.97■□□□□ 0.63
PRPF40A-209ENST00000486100 GON4LQ3T8J9 2241 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms