RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 PRRX2Q99811 253 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 SNRNP25Q9BV90 132 aaKnown RBP12.2□□□□□ -0.46
HPS4-214ENST00000485842 ZYG11BQ9C0D3 744 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 OSBPL2Q9H1P3 480 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 OSGEPQ9NPF4 335 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 LUC7LQ9NQ29 371 aaKnown RBP12.2□□□□□ -0.46
HPS4-214ENST00000485842 PRMT8Q9NR22 394 aaPredicted RBP12.2□□□□□ -0.46
HPS4-214ENST00000485842 ELOVL2Q9NXB9 296 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 CACNA2D2Q9NY47 1150 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 KIAA1522Q9P206 1035 aaPredicted RBP12.2□□□□□ -0.46
HPS4-214ENST00000485842 HCN2Q9UL51 889 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 USP18Q9UMW8 372 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 SLC8A2Q9UPR5 921 aa12.2□□□□□ -0.46
HPS4-214ENST00000485842 IGLV3-10A0A075B6K4 115 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 DRGXA6NNA5 263 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 EIF3CLB5ME19 914 aaKnown RBP12.19□□□□□ -0.46
HPS4-214ENST00000485842 SGK1O00141 431 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 LRIG2O94898 1065 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 MOCS3O95396 460 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 LCA5LO95447 670 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 RHOCP08134 193 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 HOXB2P14652 356 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 TCF4P15884 667 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 POLR2EP19388 210 aaKnown RBP12.19□□□□□ -0.46
HPS4-214ENST00000485842 MZF1P28698 734 aaPredicted RBP12.19□□□□□ -0.46
HPS4-214ENST00000485842 HOXC13P31276 330 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 AIF1P55008 147 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 NRG1Q02297 640 aaPredicted RBP12.19□□□□□ -0.46
HPS4-214ENST00000485842 CA9Q16790 459 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 SMTNL2Q2TAL5 461 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 PLEKHG6Q3KR16 790 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 C5orf22Q49AR2 442 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 PITRM1Q5JRX3 1037 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 EOGTQ5NDL2 527 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 MANEALQ5VSG8 457 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 HEATR6Q6AI08 1181 aaKnown RBP12.19□□□□□ -0.46
HPS4-214ENST00000485842 CXorf57Q6NSI4 855 aaKnown RBP12.19□□□□□ -0.46
HPS4-214ENST00000485842 TRMT11Q7Z4G4 463 aaKnown RBP12.19□□□□□ -0.46
HPS4-214ENST00000485842 ADIPOR2Q86V24 386 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 CPNE8Q86YQ8 564 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 TMEM139Q8IV31 216 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 RHOT2Q8IXI1 618 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 MAML2Q8IZL2 1156 aaPredicted RBP12.19□□□□□ -0.46
HPS4-214ENST00000485842 APCDD1Q8J025 514 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 NIPA2Q8N8Q9 360 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 ACRBPQ8NEB7 543 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 SLC35G2Q8TBE7 412 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 LMLNQ96KR4 655 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 HHIPQ96QV1 700 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 EIF3CQ99613 913 aaKnown RBP12.19□□□□□ -0.46
HPS4-214ENST00000485842 EPAS1Q99814 870 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 NCAPGQ9BPX3 1015 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 MUC3BQ9H195 1237 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 DHX35Q9H5Z1 703 aaKnown RBP12.19□□□□□ -0.46
HPS4-214ENST00000485842 ZWILCHQ9H900 591 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 INTS6Q9UL03 887 aaKnown RBP12.19□□□□□ -0.46
HPS4-214ENST00000485842 INTUQ9ULD6 942 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 MMP17Q9ULZ9 603 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 TFR2Q9UP52 801 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 STARD13Q9Y3M8 1113 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 PCDHA13Q9Y5I0 950 aa12.19□□□□□ -0.46
HPS4-214ENST00000485842 EPN1Q9Y6I3 576 aaPredicted RBP12.19□□□□□ -0.46
HPS4-214ENST00000485842 MUC22E2RYF6 1773 aaPredicted RBP12.19□□□□□ -0.46
HPS4-214ENST00000485842 ADAM23O75077 832 aa12.18□□□□□ -0.46
HPS4-214ENST00000485842 IL1R2P27930 398 aa12.18□□□□□ -0.46
HPS4-214ENST00000485842 EPHB2P29323 1055 aa12.18□□□□□ -0.46
HPS4-214ENST00000485842 OR1E1P30953 314 aa12.18□□□□□ -0.46
HPS4-214ENST00000485842 NTSR1P30989 418 aa12.18□□□□□ -0.46
HPS4-214ENST00000485842 L1CAMP32004 1257 aa12.18□□□□□ -0.46
HPS4-214ENST00000485842 PCK1P35558 622 aa12.18□□□□□ -0.46
HPS4-214ENST00000485842 OXCT1P55809 520 aa12.18□□□□□ -0.46
HPS4-214ENST00000485842 TPI1P60174 286 aa12.18□□□□□ -0.46
HPS4-214ENST00000485842 TCF15Q12870 199 aa12.18□□□□□ -0.46
HPS4-214ENST00000485842 ZNF234Q14588 700 aa12.18□□□□□ -0.46
HPS4-214ENST00000485842 MESDQ14696 234 aa12.18□□□□□ -0.46
HPS4-214ENST00000485842 ACAP1Q15027 740 aa12.18□□□□□ -0.46
HPS4-214ENST00000485842 HSF5Q4G112 596 aaPredicted RBP12.18□□□□□ -0.46
HPS4-214ENST00000485842 FNDC3BQ53EP0 1204 aaKnown RBP12.18□□□□□ -0.46
HPS4-214ENST00000485842 PPP6R3Q5H9R7 873 aaPredicted RBP12.18□□□□□ -0.46
HPS4-214ENST00000485842 ARTNQ5T4W7 220 aa12.18□□□□□ -0.46
HPS4-214ENST00000485842 ERMARDQ5T6L9 678 aa12.18□□□□□ -0.46
HPS4-214ENST00000485842 RNF219Q5W0B1 726 aaPredicted RBP12.18□□□□□ -0.46
HPS4-214ENST00000485842 SDE2Q6IQ49 451 aa12.18□□□□□ -0.46
HPS4-214ENST00000485842 CYP4V2Q6ZWL3 525 aaPredicted RBP12.18□□□□□ -0.46
HPS4-214ENST00000485842 SYT13Q7L8C5 426 aa12.18□□□□□ -0.46
HPS4-214ENST00000485842 KIAA0907Q7Z7F0 614 aaPredicted RBP12.18□□□□□ -0.46
HPS4-214ENST00000485842 TSTD1Q8NFU3 115 aa12.18□□□□□ -0.46
HPS4-214ENST00000485842 OR52K2Q8NGK3 314 aa12.18□□□□□ -0.46
HPS4-214ENST00000485842 KCNV2Q8TDN2 545 aa12.18□□□□□ -0.46
HPS4-214ENST00000485842 HSPH1Q92598 858 aa12.18□□□□□ -0.46
HPS4-214ENST00000485842 KCTD15Q96SI1 283 aaPredicted RBP12.18□□□□□ -0.46
HPS4-214ENST00000485842 THAP10Q9P2Z0 257 aaPredicted RBP12.18□□□□□ -0.46
HPS4-214ENST00000485842 PPARGC1AQ9UBK2 798 aaKnown RBP12.18□□□□□ -0.46
HPS4-214ENST00000485842 VPS28Q9UK41 221 aa12.18□□□□□ -0.46
HPS4-214ENST00000485842 FBXO4Q9UKT5 387 aa12.18□□□□□ -0.46
HPS4-214ENST00000485842 NEU3Q9UQ49 428 aa12.18□□□□□ -0.46
HPS4-214ENST00000485842 WASH3PC4AMC7 463 aa12.17□□□□□ -0.46
HPS4-214ENST00000485842 K7ESF4 209 aa12.17□□□□□ -0.46
HPS4-214ENST00000485842 EEF2KO00418 725 aaKnown RBP12.17□□□□□ -0.46
HPS4-214ENST00000485842 TIMM44O43615 452 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms