RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 POLE2P56282 527 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 HDAC4P56524 1084 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 SLC8A3P57103 927 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 YBEYP58557 167 aaPredicted RBP4.71□□□□□ -1.66
RTN4-213ENST00000485749 TPM4P67936 248 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 FOXO4P98177 505 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 CREMQ03060 361 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 TLE1Q04724 770 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 EXOSC9Q06265 439 aaKnown RBP4.71□□□□□ -1.66
RTN4-213ENST00000485749 C17orf67Q0P5P2 114 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 EFEMP1Q12805 493 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 TRAP1Q12931 704 aaKnown RBP4.71□□□□□ -1.66
RTN4-213ENST00000485749 SLC12A1Q13621 1099 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 COTL1Q14019 142 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 HABP2Q14520 560 aaPredicted RBP4.71□□□□□ -1.66
RTN4-213ENST00000485749 LASP1Q14847 261 aaKnown RBP4.71□□□□□ -1.66
RTN4-213ENST00000485749 DPYSL2Q16555 572 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 ATP2B3Q16720 1220 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 DGKDQ16760 1214 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 LRIT3Q3SXY7 679 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 FLYWCH1Q4VC44 716 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 BMP2KLQ5H9B9 411 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 TCP11X2Q5H9J9 407 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 KHDC1LQ5JSQ8 128 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 FAM26FQ5R3K3 315 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 TEX35Q5T0J7 233 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 TAF2Q6P1X5 1199 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 ERICH5Q6P6B1 374 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 PAPD4Q6PIY7 484 aaKnown RBP4.71□□□□□ -1.66
RTN4-213ENST00000485749 PAQR3Q6TCH7 311 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 KIF6Q6ZMV9 814 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 TMTC3Q6ZXV5 915 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 TAF8Q7Z7C8 310 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 LUZP1Q86V48 1076 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 COMTD1Q86VU5 262 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 TMEM200AQ86VY9 491 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 MIB1Q86YT6 1006 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 CPOQ8IVL8 374 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 IGDCC3Q8IVU1 814 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 FAM126BQ8IXS8 530 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 TMEFF1Q8IYR6 380 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 ARL14Q8N4G2 192 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 LILRB4Q8NHJ6 448 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 WDR48Q8TAF3 677 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 FAM71BQ8TC56 605 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 IFI44Q8TCB0 444 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 SPPL3Q8TCT6 385 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 SLC26A7Q8TE54 656 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 DDI1Q8WTU0 396 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 CACTINQ8WUQ7 758 aaKnown RBP4.71□□□□□ -1.66
RTN4-213ENST00000485749 HERVK_113Q902F9 699 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 TRIM43Q96BQ3 446 aaPredicted RBP4.71□□□□□ -1.66
RTN4-213ENST00000485749 EID2BQ96D98 161 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 SIPA1Q96FS4 1042 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 TOE1Q96GM8 510 aaKnown RBP4.71□□□□□ -1.66
RTN4-213ENST00000485749 PRAM1Q96QH2 718 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 SIN3AQ96ST3 1273 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 TSG101Q99816 390 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 GDF15Q99988 308 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 FDXACB1Q9BRP7 624 aaPredicted RBP4.71□□□□□ -1.66
RTN4-213ENST00000485749 BDH2Q9BUT1 245 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 PACSIN1Q9BY11 444 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 NFKBIZQ9BYH8 718 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 TRIM54Q9BYV2 358 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 REXO4Q9GZR2 422 aaKnown RBP4.71□□□□□ -1.66
RTN4-213ENST00000485749 ERVK-5Q9HDB9 667 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 SLC35D1Q9NTN3 355 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 SIDT1Q9NXL6 827 aaKnown RBP4.71□□□□□ -1.66
RTN4-213ENST00000485749 AMACRQ9UHK6 382 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 SLC39A10Q9ULF5 831 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 PIN4Q9Y237 131 aaKnown RBP4.71□□□□□ -1.66
RTN4-213ENST00000485749 C15orf41Q9Y2V0 281 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 PCDHA5Q9Y5H7 936 aa4.71□□□□□ -1.66
RTN4-213ENST00000485749 AQRO60306 1485 aaKnown RBP eCLIP4.7□□□□□ -1.661e-15■■■■□ 24.7
RTN4-213ENST00000485749 FYCO1Q9BQS8 1478 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 GOLGA6L7A0A1B0GV03 622 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 A0A1W2PR48 441 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 SYCE3A1L190 88 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 MAGEB16A2A368 324 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 EME2A4GXA9 379 aaPredicted RBP4.7□□□□□ -1.66
RTN4-213ENST00000485749 NCF1BA6NI72 391 aaPredicted RBP4.7□□□□□ -1.66
RTN4-213ENST00000485749 OR6C65A6NJZ3 312 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 LGALS16A8MUM7 142 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 NCF1CA8MVU1 366 aaPredicted RBP4.7□□□□□ -1.66
RTN4-213ENST00000485749 PTGES3LE9PB15 166 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 NDUFS8O00217 210 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 O00370 1275 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 TRIM38O00635 465 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 SMAD6O43541 496 aaKnown RBP4.7□□□□□ -1.66
RTN4-213ENST00000485749 TBC1D4O60343 1298 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 KCNJ13O60928 360 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 KRT14P02533 472 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 RARBP10826 455 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 HPGDP15428 266 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 NFKBIAP25963 317 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 ECHS1P30084 290 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 HNF1BP35680 557 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 GP5P40197 560 aa4.7□□□□□ -1.66
RTN4-213ENST00000485749 EIF2DP41214 584 aaKnown RBP4.7□□□□□ -1.66
RTN4-213ENST00000485749 LUMP51884 338 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms