RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 RNF43Q68DV7 783 aa18.09■□□□□ 0.49
CHMP3-207ENST00000485465 CHST9Q7L1S5 443 aa18.09■□□□□ 0.49
CHMP3-207ENST00000485465 CPA6Q8N4T0 437 aa18.09■□□□□ 0.49
CHMP3-207ENST00000485465 RTL3Q8N8U3 475 aaKnown RBP18.09■□□□□ 0.49
CHMP3-207ENST00000485465 ZNF592Q92610 1267 aa18.09■□□□□ 0.49
CHMP3-207ENST00000485465 BHMTQ93088 406 aa18.09■□□□□ 0.49
CHMP3-207ENST00000485465 HEMGNQ9BXL5 484 aa18.09■□□□□ 0.49
CHMP3-207ENST00000485465 PRDM16Q9HAZ2 1276 aa18.09■□□□□ 0.49
CHMP3-207ENST00000485465 ETNK2Q9NVF9 386 aa18.09■□□□□ 0.49
CHMP3-207ENST00000485465 TMEM248Q9NWD8 314 aa18.09■□□□□ 0.49
CHMP3-207ENST00000485465 PLK2Q9NYY3 685 aa18.09■□□□□ 0.49
CHMP3-207ENST00000485465 ZNF212Q9UDV6 495 aa18.09■□□□□ 0.49
CHMP3-207ENST00000485465 SAR1BQ9Y6B6 198 aa18.09■□□□□ 0.49
CHMP3-207ENST00000485465 OTOL1A6NHN0 477 aaPredicted RBP18.08■□□□□ 0.48
CHMP3-207ENST00000485465 C19orf67A6NJJ6 358 aa18.08■□□□□ 0.48
CHMP3-207ENST00000485465 NEDD8-MDP1E9PL57 170 aa18.08■□□□□ 0.48
CHMP3-207ENST00000485465 HOXC11O43248 304 aaPredicted RBP18.08■□□□□ 0.48
CHMP3-207ENST00000485465 TYRP14679 529 aa18.08■□□□□ 0.48
CHMP3-207ENST00000485465 AMPD2Q01433 879 aa18.08■□□□□ 0.48
CHMP3-207ENST00000485465 NR1H3Q13133 447 aa18.08■□□□□ 0.48
CHMP3-207ENST00000485465 TFDP2Q14188 446 aa18.08■□□□□ 0.48
CHMP3-207ENST00000485465 SLC9A4Q6AI14 798 aa18.08■□□□□ 0.48
CHMP3-207ENST00000485465 TFAP2DQ7Z6R9 452 aa18.08■□□□□ 0.48
CHMP3-207ENST00000485465 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.08■□□□□ 0.48
CHMP3-207ENST00000485465 COG1Q8WTW3 980 aa18.08■□□□□ 0.48
CHMP3-207ENST00000485465 HERPUD2Q9BSE4 406 aa18.08■□□□□ 0.48
CHMP3-207ENST00000485465 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.07■□□□□ 0.48
CHMP3-207ENST00000485465 APOL1O14791 398 aa18.07■□□□□ 0.48
CHMP3-207ENST00000485465 CST8O60676 142 aa18.07■□□□□ 0.48
CHMP3-207ENST00000485465 LUC7L3O95232 432 aaKnown RBP18.07■□□□□ 0.48
CHMP3-207ENST00000485465 ZFXP17010 805 aaPredicted RBP18.07■□□□□ 0.48
CHMP3-207ENST00000485465 MAPKAPK2P49137 400 aa18.07■□□□□ 0.48
CHMP3-207ENST00000485465 ADCY2Q08462 1091 aa18.07■□□□□ 0.48
CHMP3-207ENST00000485465 ZNF177Q13360 481 aaPredicted RBP18.07■□□□□ 0.48
CHMP3-207ENST00000485465 TDGQ13569 410 aa18.07■□□□□ 0.48
CHMP3-207ENST00000485465 ITPRIPL2Q3MIP1 535 aa18.07■□□□□ 0.48
CHMP3-207ENST00000485465 TMCO3Q6UWJ1 677 aa18.07■□□□□ 0.48
CHMP3-207ENST00000485465 SLC13A5Q86YT5 568 aaPredicted RBP18.07■□□□□ 0.48
CHMP3-207ENST00000485465 RASGEF1CQ8N431 466 aa18.07■□□□□ 0.48
CHMP3-207ENST00000485465 CARNMT1Q8N4J0 409 aa18.07■□□□□ 0.48
CHMP3-207ENST00000485465 TTC8Q8TAM2 541 aa18.07■□□□□ 0.48
CHMP3-207ENST00000485465 TRPV5Q9NQA5 729 aa18.07■□□□□ 0.48
CHMP3-207ENST00000485465 DONSONQ9NYP3 566 aa18.07■□□□□ 0.48
CHMP3-207ENST00000485465 GTSE1Q9NYZ3 720 aa18.07■□□□□ 0.48
CHMP3-207ENST00000485465 MFHAS1Q9Y4C4 1052 aa18.07■□□□□ 0.48
CHMP3-207ENST00000485465 H0Y626 953 aa18.06■□□□□ 0.48
CHMP3-207ENST00000485465 ZNF185O15231 689 aa18.06■□□□□ 0.48
CHMP3-207ENST00000485465 TJP3O95049 919 aa18.06■□□□□ 0.48
CHMP3-207ENST00000485465 OR1E1P30953 314 aa18.06■□□□□ 0.48
CHMP3-207ENST00000485465 DYNLT1P63172 113 aa18.06■□□□□ 0.48
CHMP3-207ENST00000485465 PAFAH1B3Q15102 231 aaKnown RBP18.06■□□□□ 0.48
CHMP3-207ENST00000485465 GAB4Q2WGN9 574 aa18.06■□□□□ 0.48
CHMP3-207ENST00000485465 NCBP2-AS2Q69YL0 99 aa18.06■□□□□ 0.48
CHMP3-207ENST00000485465 BBS12Q6ZW61 710 aa18.06■□□□□ 0.48
CHMP3-207ENST00000485465 MFN1Q8IWA4 741 aa18.06■□□□□ 0.48
CHMP3-207ENST00000485465 CCDC117Q8IWD4 279 aaPredicted RBP18.06■□□□□ 0.48
CHMP3-207ENST00000485465 LZTR1Q8N653 840 aa18.06■□□□□ 0.48
CHMP3-207ENST00000485465 PLD5Q8N7P1 536 aa18.06■□□□□ 0.48
CHMP3-207ENST00000485465 KIF18AQ8NI77 898 aa18.06■□□□□ 0.48
CHMP3-207ENST00000485465 CSGALNACT1Q8TDX6 532 aa18.06■□□□□ 0.48
CHMP3-207ENST00000485465 MS4A14Q96JA4 679 aa18.06■□□□□ 0.48
CHMP3-207ENST00000485465 KLC2Q9H0B6 622 aa18.06■□□□□ 0.48
CHMP3-207ENST00000485465 NDFIP2Q9NV92 336 aa18.06■□□□□ 0.48
CHMP3-207ENST00000485465 TTC7AQ9ULT0 858 aaPredicted RBP18.06■□□□□ 0.48
CHMP3-207ENST00000485465 CLEC4EQ9ULY5 219 aa18.06■□□□□ 0.48
CHMP3-207ENST00000485465 TBC1D30Q9Y2I9 924 aa18.06■□□□□ 0.48
CHMP3-207ENST00000485465 CACNG3O60359 315 aa18.05■□□□□ 0.48
CHMP3-207ENST00000485465 GJA4P35212 333 aa18.05■□□□□ 0.48
CHMP3-207ENST00000485465 KLF1Q13351 362 aaPredicted RBP18.05■□□□□ 0.48
CHMP3-207ENST00000485465 CDH18Q13634 790 aa18.05■□□□□ 0.48
CHMP3-207ENST00000485465 FSCBQ5H9T9 825 aa18.05■□□□□ 0.48
CHMP3-207ENST00000485465 C6orf118Q5T5N4 469 aa18.05■□□□□ 0.48
CHMP3-207ENST00000485465 CXorf57Q6NSI4 855 aaKnown RBP18.05■□□□□ 0.48
CHMP3-207ENST00000485465 SETD3Q86TU7 594 aaPredicted RBP18.05■□□□□ 0.48
CHMP3-207ENST00000485465 UMODL1-AS1Q8N2C9 162 aa18.05■□□□□ 0.48
CHMP3-207ENST00000485465 NPWQ8N729 165 aa18.05■□□□□ 0.48
CHMP3-207ENST00000485465 NAT16Q8N8M0 369 aa18.05■□□□□ 0.48
CHMP3-207ENST00000485465 FIBINQ8TAL6 211 aa18.05■□□□□ 0.48
CHMP3-207ENST00000485465 WFDC5Q8TCV5 224 aa18.05■□□□□ 0.48
CHMP3-207ENST00000485465 DNASE1L2Q92874 299 aa18.05■□□□□ 0.48
CHMP3-207ENST00000485465 XPO6Q96QU8 1125 aaKnown RBP18.05■□□□□ 0.48
CHMP3-207ENST00000485465 SLC2A11Q9BYW1 496 aa18.05■□□□□ 0.48
CHMP3-207ENST00000485465 FBXO10Q9UK96 956 aa18.05■□□□□ 0.48
CHMP3-207ENST00000485465 TCRBV7S2A1N4TA0A589 114 aa18.04■□□□□ 0.48
CHMP3-207ENST00000485465 NARSO43776 548 aaKnown RBP18.04■□□□□ 0.48
CHMP3-207ENST00000485465 FGGP02679 453 aa18.04■□□□□ 0.48
CHMP3-207ENST00000485465 RHOCP08134 193 aa18.04■□□□□ 0.48
CHMP3-207ENST00000485465 SRFP11831 508 aa18.04■□□□□ 0.48
CHMP3-207ENST00000485465 TGM2P21980 687 aa18.04■□□□□ 0.48
CHMP3-207ENST00000485465 SERPINB6P35237 376 aa18.04■□□□□ 0.48
CHMP3-207ENST00000485465 NDST2P52849 883 aa18.04■□□□□ 0.48
CHMP3-207ENST00000485465 LONRF2Q1L5Z9 754 aa18.04■□□□□ 0.48
CHMP3-207ENST00000485465 AFMIDQ63HM1 303 aa18.04■□□□□ 0.48
CHMP3-207ENST00000485465 C1orf228Q6PIY5 440 aa18.04■□□□□ 0.48
CHMP3-207ENST00000485465 C12orf40Q86WS4 652 aa18.04■□□□□ 0.48
CHMP3-207ENST00000485465 CREG2Q8IUH2 290 aa18.04■□□□□ 0.48
CHMP3-207ENST00000485465 ETFBKMTQ8IXQ9 262 aa18.04■□□□□ 0.48
CHMP3-207ENST00000485465 ZNF557Q8N988 423 aaPredicted RBP18.04■□□□□ 0.48
CHMP3-207ENST00000485465 ACTRT1Q8TDG2 376 aa18.04■□□□□ 0.48
CHMP3-207ENST00000485465 NOL6Q9H6R4 1146 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms