RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 OSBPL5Q9H0X9 879 aaPredicted RBP4.87□□□□□ -1.63
SCAF11-207ENST00000484275 PNMA6EA0A0J9YXQ4 647 aa4.86□□□□□ -1.63
SCAF11-207ENST00000484275 GAGE12JA6NER3 117 aa4.86□□□□□ -1.63
SCAF11-207ENST00000484275 PCDH17O14917 1159 aa4.86□□□□□ -1.63
SCAF11-207ENST00000484275 HARSP12081 509 aaKnown RBP4.86□□□□□ -1.63
SCAF11-207ENST00000484275 PCYT1AP49585 367 aa4.86□□□□□ -1.63
SCAF11-207ENST00000484275 PDLIM4P50479 330 aa4.86□□□□□ -1.63
SCAF11-207ENST00000484275 RRP1P56182 461 aaKnown RBP4.86□□□□□ -1.63
SCAF11-207ENST00000484275 POLE2P56282 527 aa4.86□□□□□ -1.63
SCAF11-207ENST00000484275 FOXL2P58012 376 aa4.86□□□□□ -1.63
SCAF11-207ENST00000484275 TAS2R50P59544 299 aa4.86□□□□□ -1.63
SCAF11-207ENST00000484275 PMPCAQ10713 525 aa4.86□□□□□ -1.63
SCAF11-207ENST00000484275 GRM4Q14833 912 aa4.86□□□□□ -1.63
SCAF11-207ENST00000484275 AAK1Q2M2I8 961 aa4.86□□□□□ -1.63
SCAF11-207ENST00000484275 SLC35G1Q2M3R5 365 aa4.86□□□□□ -1.63
SCAF11-207ENST00000484275 KRTAP27-1Q3LI81 207 aa4.86□□□□□ -1.63
SCAF11-207ENST00000484275 ARL13BQ3SXY8 428 aa4.86□□□□□ -1.63
SCAF11-207ENST00000484275 DGKKQ5KSL6 1271 aa4.86□□□□□ -1.63
SCAF11-207ENST00000484275 WDR75Q8IWA0 830 aaKnown RBP4.86□□□□□ -1.63
SCAF11-207ENST00000484275 TXLNBQ8N3L3 684 aa4.86□□□□□ -1.63
SCAF11-207ENST00000484275 FAR2Q96K12 515 aa4.86□□□□□ -1.63
SCAF11-207ENST00000484275 KRCC1Q9NPI7 259 aaPredicted RBP4.86□□□□□ -1.63
SCAF11-207ENST00000484275 FBXO4Q9UKT5 387 aa4.86□□□□□ -1.63
SCAF11-207ENST00000484275 FAM50BQ9Y247 325 aa4.86□□□□□ -1.63
SCAF11-207ENST00000484275 OR6C75A6NL08 312 aa4.85□□□□□ -1.63
SCAF11-207ENST00000484275 I6L893 689 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-207ENST00000484275 NCK2O43639 380 aa4.85□□□□□ -1.63
SCAF11-207ENST00000484275 CER1O95813 267 aa4.85□□□□□ -1.63
SCAF11-207ENST00000484275 CYP1A2P05177 515 aa4.85□□□□□ -1.63
SCAF11-207ENST00000484275 SELENOVP59797 346 aa4.85□□□□□ -1.63
SCAF11-207ENST00000484275 C9orf50Q5SZB4 431 aa4.85□□□□□ -1.63
SCAF11-207ENST00000484275 ADAMTS14Q8WXS8 1223 aa4.85□□□□□ -1.63
SCAF11-207ENST00000484275 ZNF419Q96HQ0 510 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-207ENST00000484275 ADAD1Q96M93 576 aaKnown RBP4.85□□□□□ -1.63
SCAF11-207ENST00000484275 EPS8L2Q9H6S3 715 aa4.85□□□□□ -1.63
SCAF11-207ENST00000484275 RMI1Q9H9A7 625 aa4.85□□□□□ -1.63
SCAF11-207ENST00000484275 SFXN1Q9H9B4 322 aa4.85□□□□□ -1.63
SCAF11-207ENST00000484275 ZNF304Q9HCX3 659 aa4.85□□□□□ -1.63
SCAF11-207ENST00000484275 NCKIPSDQ9NZQ3 722 aa4.85□□□□□ -1.63
SCAF11-207ENST00000484275 PLEKHB1Q9UF11 243 aaPredicted RBP4.85□□□□□ -1.63
SCAF11-207ENST00000484275 SPRY3O43610 288 aa4.84□□□□□ -1.63
SCAF11-207ENST00000484275 NTSR2O95665 410 aa4.84□□□□□ -1.63
SCAF11-207ENST00000484275 ARSBP15848 533 aa4.84□□□□□ -1.63
SCAF11-207ENST00000484275 RPL15P61313 204 aaKnown RBP4.84□□□□□ -1.63
SCAF11-207ENST00000484275 RPL36AP83881 106 aaKnown RBP4.84□□□□□ -1.63
SCAF11-207ENST00000484275 GALNT3Q14435 633 aa4.84□□□□□ -1.63
SCAF11-207ENST00000484275 PRAMEF19Q5SWL8 479 aa4.84□□□□□ -1.63
SCAF11-207ENST00000484275 ANKRD40Q6AI12 368 aa4.84□□□□□ -1.63
SCAF11-207ENST00000484275 PRSS57Q6UWY2 283 aa4.84□□□□□ -1.63
SCAF11-207ENST00000484275 FAM83HQ6ZRV2 1179 aaPredicted RBP4.84□□□□□ -1.63
SCAF11-207ENST00000484275 KDM1BQ8NB78 822 aa4.84□□□□□ -1.63
SCAF11-207ENST00000484275 GABPB2Q8TAK5 448 aaPredicted RBP4.84□□□□□ -1.63
SCAF11-207ENST00000484275 WDR77Q9BQA1 342 aaPredicted RBP4.84□□□□□ -1.63
SCAF11-207ENST00000484275 SEZ6LQ9BYH1 1024 aa4.84□□□□□ -1.63
SCAF11-207ENST00000484275 STARD7Q9NQZ5 370 aa4.84□□□□□ -1.63
SCAF11-207ENST00000484275 PLSCR4Q9NRQ2 329 aa4.84□□□□□ -1.63
SCAF11-207ENST00000484275 MSI1O43347 362 aaKnown RBP4.83□□□□□ -1.64
SCAF11-207ENST00000484275 PPP1R3DO95685 299 aa4.83□□□□□ -1.64
SCAF11-207ENST00000484275 FAM3BP58499 235 aaPredicted RBP4.83□□□□□ -1.64
SCAF11-207ENST00000484275 GPR18Q14330 331 aa4.83□□□□□ -1.64
SCAF11-207ENST00000484275 ARL13AQ5H913 290 aaPredicted RBP4.83□□□□□ -1.64
SCAF11-207ENST00000484275 C10orf76Q5T2E6 689 aa4.83□□□□□ -1.64
SCAF11-207ENST00000484275 CADM3Q8N126 398 aa4.83□□□□□ -1.64
SCAF11-207ENST00000484275 ADPRHL1Q8NDY3 354 aa4.83□□□□□ -1.64
SCAF11-207ENST00000484275 NAA15Q9BXJ9 866 aaKnown RBP4.83□□□□□ -1.64
SCAF11-207ENST00000484275 EIF2AQ9BY44 585 aaKnown RBP4.83□□□□□ -1.64
SCAF11-207ENST00000484275 POLDIP3Q9BY77 421 aaKnown RBP4.83□□□□□ -1.64
SCAF11-207ENST00000484275 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.83□□□□□ -1.64
SCAF11-207ENST00000484275 PNRC2Q9NPJ4 139 aaKnown RBP4.83□□□□□ -1.64
SCAF11-207ENST00000484275 RAB21Q9UL25 225 aa4.83□□□□□ -1.64
SCAF11-207ENST00000484275 CA14Q9ULX7 337 aa4.83□□□□□ -1.64
SCAF11-207ENST00000484275 TNFSF13BQ9Y275 285 aa4.83□□□□□ -1.64
SCAF11-207ENST00000484275 KCNJ18B7U540 433 aa4.82□□□□□ -1.64
SCAF11-207ENST00000484275 FGF18O76093 207 aa4.82□□□□□ -1.64
SCAF11-207ENST00000484275 IGKV3-20P01619 116 aa4.82□□□□□ -1.64
SCAF11-207ENST00000484275 ALDOAP04075 364 aaKnown RBP4.82□□□□□ -1.64
SCAF11-207ENST00000484275 ANXA6P08133 673 aa4.82□□□□□ -1.64
SCAF11-207ENST00000484275 GAS1P54826 345 aa4.82□□□□□ -1.64
SCAF11-207ENST00000484275 TLE3Q04726 772 aa4.82□□□□□ -1.64
SCAF11-207ENST00000484275 SHBQ15464 509 aa4.82□□□□□ -1.64
SCAF11-207ENST00000484275 FAM209BQ5JX69 171 aa4.82□□□□□ -1.64
SCAF11-207ENST00000484275 ZNF329Q86UD4 541 aa4.82□□□□□ -1.64
SCAF11-207ENST00000484275 SLC25A41Q8N5S1 370 aa4.82□□□□□ -1.64
SCAF11-207ENST00000484275 NR4A3Q92570 626 aa4.82□□□□□ -1.64
SCAF11-207ENST00000484275 FRMD8Q9BZ67 464 aaPredicted RBP4.82□□□□□ -1.64
SCAF11-207ENST00000484275 C6orf106Q9H6K1 298 aaPredicted RBP4.82□□□□□ -1.64
SCAF11-207ENST00000484275 HELLSQ9NRZ9 838 aa4.82□□□□□ -1.64
SCAF11-207ENST00000484275 PCDHGB1Q9Y5G3 927 aa4.82□□□□□ -1.64
SCAF11-207ENST00000484275 CYP3A7-CYP3A51PA0A087WV96 503 aa4.81□□□□□ -1.64
SCAF11-207ENST00000484275 TRBV5-7A0A0A0MS05 114 aa4.81□□□□□ -1.64
SCAF11-207ENST00000484275 A0A1B0GUV1 79 aa4.81□□□□□ -1.64
SCAF11-207ENST00000484275 APAF1O14727 1248 aa4.81□□□□□ -1.64
SCAF11-207ENST00000484275 RPP40O75818 363 aaKnown RBP4.81□□□□□ -1.64
SCAF11-207ENST00000484275 GAS8-AS1O95177 125 aa4.81□□□□□ -1.64
SCAF11-207ENST00000484275 CYP3A4P08684 503 aa4.81□□□□□ -1.64
SCAF11-207ENST00000484275 CYP3A7P24462 503 aa4.81□□□□□ -1.64
SCAF11-207ENST00000484275 EEF1GP26641 437 aaKnown RBP4.81□□□□□ -1.64
SCAF11-207ENST00000484275 HOXD3P31249 432 aaPredicted RBP4.81□□□□□ -1.64
SCAF11-207ENST00000484275 KCNJ4P48050 445 aa4.81□□□□□ -1.64
SCAF11-207ENST00000484275 COMPP49747 757 aaPredicted RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms