RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 MTF2Q9Y483 593 aaPredicted RBP4.75□□□□□ -1.65
PTCD3-214ENST00000483925 CCDC69A6NI79 296 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 GLOD5A6NK44 160 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 CXorf49A8MYA2 514 aaPredicted RBP4.74□□□□□ -1.65
PTCD3-214ENST00000483925 DDX39AO00148 427 aaKnown RBP4.74□□□□□ -1.65
PTCD3-214ENST00000483925 SYNCRIPO60506 623 aaKnown RBP4.74□□□□□ -1.65
PTCD3-214ENST00000483925 ENTPD3O75355 529 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 SLC22A3O75751 556 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 AGFG2O95081 481 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 PDE8BO95263 885 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 CFIP05156 583 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 TPM2P07951 284 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 CYP21A2P08686 494 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 TMIGD3P0DMS9 266 aaPredicted RBP4.74□□□□□ -1.65
PTCD3-214ENST00000483925 MYBL1P10243 752 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 COX7A2P14406 83 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 CHN1P15882 459 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 SLC6A4P31645 630 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 GARSP41250 739 aaKnown RBP4.74□□□□□ -1.65
PTCD3-214ENST00000483925 CPA2P48052 419 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 PCP4P48539 62 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 DGKEP52429 567 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 PTTG1IPP53801 180 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 PRKAG1P54619 331 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 HDAC4P56524 1084 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 EIF4A1P60842 406 aaKnown RBP4.74□□□□□ -1.65
PTCD3-214ENST00000483925 SLMAPQ14BN4 828 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 C2orf76Q3KRA6 126 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 SETMARQ53H47 684 aaPredicted RBP4.74□□□□□ -1.65
PTCD3-214ENST00000483925 MFSD14BQ5SR56 506 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 FNDC7Q5VTL7 733 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 KRT40Q6A162 431 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 ADALQ6DHV7 355 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 HMBOX1Q6NT76 420 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 SHQ1Q6PI26 577 aaKnown RBP4.74□□□□□ -1.65
PTCD3-214ENST00000483925 MED25Q71SY5 747 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 UBE3BQ7Z3V4 1068 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 RPAINQ86UA6 219 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 NLRP14Q86W24 1093 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 ZNF619Q8N2I2 560 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 FITM2Q8N6M3 262 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 OR5M3Q8NGP4 307 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 GPR150Q8NGU9 434 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 ZNF483Q8TF39 744 aaPredicted RBP4.74□□□□□ -1.65
PTCD3-214ENST00000483925 PRPF31Q8WWY3 499 aaKnown RBP4.74□□□□□ -1.65
PTCD3-214ENST00000483925 TAF4BQ92750 862 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 PPP2R3CQ969Q6 453 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 EXOC4Q96A65 974 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 ELP4Q96EB1 424 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 SIPA1Q96FS4 1042 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 HIST1H2AAQ96QV6 131 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 MECRQ9BV79 373 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 ACAT2Q9BWD1 397 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 IMPG2Q9BZV3 1241 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 TTYH3Q9C0H2 523 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 PCDHB16Q9NRJ7 776 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 SELENONQ9NZV5 590 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 C5AR2Q9P296 337 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 XPO7Q9UIA9 1087 aaKnown RBP4.74□□□□□ -1.65
PTCD3-214ENST00000483925 OSGIN2Q9Y236 505 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 ZBTB1Q9Y2K1 713 aa4.74□□□□□ -1.65
PTCD3-214ENST00000483925 PMS2P1A4D2B8 440 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 CCDC151A5D8V7 595 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 MBD3L5A6NJ08 208 aaPredicted RBP4.73□□□□□ -1.65
PTCD3-214ENST00000483925 TEX22C9J3V5 150 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 WNT10BO00744 389 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 IPO8O15397 1037 aaKnown RBP4.73□□□□□ -1.65
PTCD3-214ENST00000483925 CD3EAPO15446 510 aaKnown RBP4.73□□□□□ -1.65
PTCD3-214ENST00000483925 TGFB1I1O43294 461 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 STX6O43752 255 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 EXOC3O60645 756 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 VSIG10L2P0DP72 767 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 PRKAR1BP31321 381 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 GSTM5P46439 218 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 GZMKP49863 264 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 MRPL12P52815 198 aaKnown RBP4.73□□□□□ -1.65
PTCD3-214ENST00000483925 CDH8P55286 799 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 CLRN1P58418 232 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 UFM1P61960 85 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 RBM6P78332 1123 aaKnown RBP4.73□□□□□ -1.65
PTCD3-214ENST00000483925 YWHAHQ04917 246 aaPredicted RBP4.73□□□□□ -1.65
PTCD3-214ENST00000483925 PIGFQ07326 219 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 THOC5Q13769 683 aaKnown RBP4.73□□□□□ -1.65
PTCD3-214ENST00000483925 IRF3Q14653 427 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 KCNB1Q14721 858 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 NAA25Q14CX7 972 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 MORF4L2Q15014 288 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 ZNF674Q2M3X9 581 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 P3H1Q32P28 736 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 MSANTD2Q6P1R3 559 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 SLC2A7Q6PXP3 512 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 DENND5BQ6ZUT9 1274 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 CHST9Q7L1S5 443 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 RRM2BQ7LG56 351 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 SLC9B2Q86UD5 537 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 ZNF280BQ86YH2 543 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 GPR135Q8IZ08 494 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 D2HGDHQ8N465 521 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 TMIEQ8NEW7 156 aa4.73□□□□□ -1.65
PTCD3-214ENST00000483925 Q8NFD4 153 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms