RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 TRHDEQ9UKU6 1024 aa26.95■■□□□ 1.9
SHOX2-204ENST00000483851 CLUHO75153 1309 aa26.95■■□□□ 1.9
SHOX2-204ENST00000483851 IGLV3-10A0A075B6K4 115 aa26.94■■□□□ 1.9
SHOX2-204ENST00000483851 PRRG1O14668 218 aa26.94■■□□□ 1.9
SHOX2-204ENST00000483851 METTL18O95568 372 aa26.94■■□□□ 1.9
SHOX2-204ENST00000483851 SARNPP82979 210 aaKnown RBP26.94■■□□□ 1.9
SHOX2-204ENST00000483851 TAF12Q16514 161 aa26.94■■□□□ 1.9
SHOX2-204ENST00000483851 MS4A13Q5J8X5 152 aa26.94■■□□□ 1.9
SHOX2-204ENST00000483851 FNBP1LQ5T0N5 605 aa26.94■■□□□ 1.9
SHOX2-204ENST00000483851 HECTD3Q5T447 861 aa26.94■■□□□ 1.9
SHOX2-204ENST00000483851 SRLQ86TD4 932 aa26.94■■□□□ 1.9
SHOX2-204ENST00000483851 MIB1Q86YT6 1006 aa26.94■■□□□ 1.9
SHOX2-204ENST00000483851 ZNF683Q8IZ20 524 aa26.94■■□□□ 1.9
SHOX2-204ENST00000483851 PYROXD1Q8WU10 500 aa26.94■■□□□ 1.9
SHOX2-204ENST00000483851 LRRC39Q96DD0 335 aa26.94■■□□□ 1.9
SHOX2-204ENST00000483851 RETREG1Q9H6L5 497 aa26.94■■□□□ 1.9
SHOX2-204ENST00000483851 CCSER2Q9H7U1 834 aa26.94■■□□□ 1.9
SHOX2-204ENST00000483851 TEX28O15482 410 aa26.93■■□□□ 1.9
SHOX2-204ENST00000483851 APRTP07741 180 aa26.93■■□□□ 1.9
SHOX2-204ENST00000483851 EPHB3P54753 998 aa26.93■■□□□ 1.9
SHOX2-204ENST00000483851 MAGOHP61326 146 aaKnown RBP26.93■■□□□ 1.9
SHOX2-204ENST00000483851 HERC6Q8IVU3 1022 aa26.93■■□□□ 1.9
SHOX2-204ENST00000483851 CCDC13Q8IYE1 715 aa26.93■■□□□ 1.9
SHOX2-204ENST00000483851 CCDC33Q8N5R6 958 aa26.93■■□□□ 1.9
SHOX2-204ENST00000483851 ATP11CQ8NB49 1132 aa26.93■■□□□ 1.9
SHOX2-204ENST00000483851 LRRN4Q8WUT4 740 aa26.93■■□□□ 1.9
SHOX2-204ENST00000483851 BCCIPQ9P287 314 aaKnown RBP eCLIP26.93■■□□□ 1.9
SHOX2-204ENST00000483851 LZTS1Q9Y250 596 aa26.93■■□□□ 1.9
SHOX2-204ENST00000483851 RHOQP17081 205 aa26.93■■□□□ 1.9
SHOX2-204ENST00000483851 CCNCP24863 283 aa26.93■■□□□ 1.9
SHOX2-204ENST00000483851 PHBP35232 272 aa26.93■■□□□ 1.9
SHOX2-204ENST00000483851 CCDC38Q502W7 563 aa26.93■■□□□ 1.9
SHOX2-204ENST00000483851 TNFAIP8L3Q5GJ75 292 aa26.93■■□□□ 1.9
SHOX2-204ENST00000483851 AFMIDQ63HM1 303 aa26.93■■□□□ 1.9
SHOX2-204ENST00000483851 ITIH5Q86UX2 942 aa26.93■■□□□ 1.9
SHOX2-204ENST00000483851 TAB3Q8N5C8 712 aaPredicted RBP26.93■■□□□ 1.9
SHOX2-204ENST00000483851 XAB2Q9HCS7 855 aaKnown RBP26.93■■□□□ 1.9
SHOX2-204ENST00000483851 ASB3Q9Y575 518 aa26.93■■□□□ 1.9
SHOX2-204ENST00000483851 INSL5Q9Y5Q6 135 aa26.93■■□□□ 1.9
SHOX2-204ENST00000483851 SLC4A7Q9Y6M7 1214 aa26.93■■□□□ 1.9
SHOX2-204ENST00000483851 E7EVH7 732 aa26.92■■□□□ 1.9
SHOX2-204ENST00000483851 DNAJB2P25686 324 aa26.92■■□□□ 1.9
SHOX2-204ENST00000483851 AUHQ13825 339 aaKnown RBP26.92■■□□□ 1.9
SHOX2-204ENST00000483851 ZNF567Q8N184 647 aa26.92■■□□□ 1.9
SHOX2-204ENST00000483851 ZYG11BQ9C0D3 744 aa26.92■■□□□ 1.9
SHOX2-204ENST00000483851 MTIF3Q9H2K0 278 aaKnown RBP26.92■■□□□ 1.9
SHOX2-204ENST00000483851 CXXC1Q9P0U4 656 aaPredicted RBP26.92■■□□□ 1.9
SHOX2-204ENST00000483851 RRP15Q9Y3B9 282 aaKnown RBP26.92■■□□□ 1.9
SHOX2-204ENST00000483851 SPAG6O75602 509 aa26.91■■□□□ 1.9
SHOX2-204ENST00000483851 AGTP01019 485 aa26.91■■□□□ 1.9
SHOX2-204ENST00000483851 MLNP12872 115 aa26.91■■□□□ 1.9
SHOX2-204ENST00000483851 ATP2A2P16615 1042 aaKnown RBP26.91■■□□□ 1.9
SHOX2-204ENST00000483851 CCT5P48643 541 aa26.91■■□□□ 1.9
SHOX2-204ENST00000483851 GAD2Q05329 585 aa26.91■■□□□ 1.9
SHOX2-204ENST00000483851 C14orf80Q86SX3 495 aa26.91■■□□□ 1.9
SHOX2-204ENST00000483851 ARHGAP12Q8IWW6 846 aa26.91■■□□□ 1.9
SHOX2-204ENST00000483851 TP53INP2Q8IXH6 220 aa26.91■■□□□ 1.9
SHOX2-204ENST00000483851 RIBC1Q8N443 379 aaPredicted RBP26.91■■□□□ 1.9
SHOX2-204ENST00000483851 DPF3Q92784 378 aa26.91■■□□□ 1.9
SHOX2-204ENST00000483851 PSMG2Q969U7 264 aa26.91■■□□□ 1.9
SHOX2-204ENST00000483851 AZIN2Q96A70 460 aa26.91■■□□□ 1.9
SHOX2-204ENST00000483851 FETUBQ9UGM5 382 aa26.91■■□□□ 1.9
SHOX2-204ENST00000483851 RWDD3Q9Y3V2 267 aa26.91■■□□□ 1.9
SHOX2-204ENST00000483851 IRAK3Q9Y616 596 aa26.91■■□□□ 1.9
SHOX2-204ENST00000483851 RGS16O15492 202 aaPredicted RBP26.91■■□□□ 1.9
SHOX2-204ENST00000483851 PTPN3P26045 913 aa26.91■■□□□ 1.9
SHOX2-204ENST00000483851 FASTKD3Q14CZ7 662 aaKnown RBP26.91■■□□□ 1.9
SHOX2-204ENST00000483851 MSS51Q4VC12 460 aa26.91■■□□□ 1.9
SHOX2-204ENST00000483851 ITPRIPL1Q6GPH6 555 aa26.91■■□□□ 1.9
SHOX2-204ENST00000483851 NLRP14Q86W24 1093 aa26.91■■□□□ 1.9
SHOX2-204ENST00000483851 UMODL1-AS1Q8N2C9 162 aa26.91■■□□□ 1.9
SHOX2-204ENST00000483851 KLHL23Q8NBE8 558 aa26.91■■□□□ 1.9
SHOX2-204ENST00000483851 UHMK1Q8TAS1 419 aaKnown RBP26.91■■□□□ 1.9
SHOX2-204ENST00000483851 PLD4Q96BZ4 506 aa26.91■■□□□ 1.9
SHOX2-204ENST00000483851 PRMT1Q99873 361 aaKnown RBP26.91■■□□□ 1.9
SHOX2-204ENST00000483851 TMEM248Q9NWD8 314 aa26.91■■□□□ 1.9
SHOX2-204ENST00000483851 DOCK4Q8N1I0 1966 aa26.9■■□□□ 1.9
SHOX2-204ENST00000483851 DRGXA6NNA5 263 aa26.9■■□□□ 1.9
SHOX2-204ENST00000483851 ATP5DP30049 168 aa26.9■■□□□ 1.9
SHOX2-204ENST00000483851 MAGEA3P43357 314 aa26.9■■□□□ 1.9
SHOX2-204ENST00000483851 NDST2P52849 883 aa26.9■■□□□ 1.9
SHOX2-204ENST00000483851 TWF1Q12792 350 aa26.9■■□□□ 1.9
SHOX2-204ENST00000483851 BBS9Q3SYG4 887 aa26.9■■□□□ 1.9
SHOX2-204ENST00000483851 TEX44Q53QW1 395 aa26.9■■□□□ 1.9
SHOX2-204ENST00000483851 AUTS2Q8WXX7 1259 aa26.9■■□□□ 1.9
SHOX2-204ENST00000483851 TEX264Q9Y6I9 313 aa26.9■■□□□ 1.9
SHOX2-204ENST00000483851 RASA2Q15283 850 aa26.89■■□□□ 1.9
SHOX2-204ENST00000483851 PABPC1LQ4VXU2 614 aaKnown RBP26.89■■□□□ 1.9
SHOX2-204ENST00000483851 FAXCQ5TGI0 409 aa26.89■■□□□ 1.9
SHOX2-204ENST00000483851 TIGD7Q6NT04 549 aaPredicted RBP26.89■■□□□ 1.9
SHOX2-204ENST00000483851 PID1Q7Z2X4 250 aa26.89■■□□□ 1.9
SHOX2-204ENST00000483851 DNAJB7Q7Z6W7 309 aaPredicted RBP26.89■■□□□ 1.9
SHOX2-204ENST00000483851 C7orf61Q8IZ16 206 aa26.89■■□□□ 1.9
SHOX2-204ENST00000483851 ATPAF2Q8N5M1 289 aa26.89■■□□□ 1.9
SHOX2-204ENST00000483851 FBXO36Q8NEA4 188 aa26.89■■□□□ 1.9
SHOX2-204ENST00000483851 FATE1Q969F0 183 aa26.89■■□□□ 1.9
SHOX2-204ENST00000483851 NACA2Q9H009 215 aa26.89■■□□□ 1.9
SHOX2-204ENST00000483851 SEPT10Q9P0V9 454 aa26.89■■□□□ 1.9
SHOX2-204ENST00000483851 KLHL8Q9P2G9 620 aaPredicted RBP26.89■■□□□ 1.9
SHOX2-204ENST00000483851 VANGL2Q9ULK5 521 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms