RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 AFMIDQ63HM1 303 aa13.58□□□□□ -0.24
CPNE1-225ENST00000483495 KCTD11Q693B1 232 aa13.58□□□□□ -0.24
CPNE1-225ENST00000483495 RWDD4Q6NW29 188 aaKnown RBP13.58□□□□□ -0.24
CPNE1-225ENST00000483495 CPLX4Q7Z7G2 160 aa13.58□□□□□ -0.24
CPNE1-225ENST00000483495 SLC26A11Q86WA9 606 aa13.58□□□□□ -0.24
CPNE1-225ENST00000483495 LRRC6Q86X45 466 aa13.58□□□□□ -0.24
CPNE1-225ENST00000483495 KLHDC8BQ8IXV7 354 aa13.58□□□□□ -0.24
CPNE1-225ENST00000483495 LRRC34Q8IZ02 419 aa13.58□□□□□ -0.24
CPNE1-225ENST00000483495 MGARPQ8TDB4 240 aa13.58□□□□□ -0.24
CPNE1-225ENST00000483495 DYDC1Q8WWB3 177 aa13.58□□□□□ -0.24
CPNE1-225ENST00000483495 FBXO32Q969P5 355 aa13.58□□□□□ -0.24
CPNE1-225ENST00000483495 ALKBH8Q96BT7 664 aaKnown RBP13.58□□□□□ -0.24
CPNE1-225ENST00000483495 STAMBPL1Q96FJ0 436 aa13.58□□□□□ -0.24
CPNE1-225ENST00000483495 CEP295NLQ96MC4 621 aa13.58□□□□□ -0.24
CPNE1-225ENST00000483495 BEGAINQ9BUH8 593 aa13.58□□□□□ -0.24
CPNE1-225ENST00000483495 CWH43Q9H720 699 aa13.58□□□□□ -0.24
CPNE1-225ENST00000483495 OLA1Q9NTK5 396 aaKnown RBP13.58□□□□□ -0.24
CPNE1-225ENST00000483495 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.58□□□□□ -0.24
CPNE1-225ENST00000483495 MOCS1Q9NZB8 636 aa13.58□□□□□ -0.24
CPNE1-225ENST00000483495 NUDT5Q9UKK9 219 aa13.58□□□□□ -0.24
CPNE1-225ENST00000483495 ATXN2Q99700 1313 aaKnown RBP13.58□□□□□ -0.24
CPNE1-225ENST00000483495 FNDC1Q4ZHG4 1894 aaPredicted RBP13.58□□□□□ -0.24
CPNE1-225ENST00000483495 MYO16Q9Y6X6 1858 aa13.58□□□□□ -0.24
CPNE1-225ENST00000483495 FAM159BA6NKW6 160 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 E9PAM4 449 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 ZBTB24O43167 697 aaPredicted RBP13.57□□□□□ -0.24
CPNE1-225ENST00000483495 CACNG3O60359 315 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 ALDH1A2O94788 518 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 INHBAP08476 426 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 ZDHHC11BP0C7U3 371 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 CCNCP24863 283 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 ARPP19P56211 112 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 RPL10AP62906 217 aaKnown RBP13.57□□□□□ -0.24
CPNE1-225ENST00000483495 IKBKEQ14164 716 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 MGAT5BQ3V5L5 792 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 GKAP1Q5VSY0 366 aaPredicted RBP13.57□□□□□ -0.24
CPNE1-225ENST00000483495 NUGGCQ68CJ6 796 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 ITPRIPL1Q6GPH6 555 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 SLC8B1Q6J4K2 584 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 CNKSR3Q6P9H4 555 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.57□□□□□ -0.24
CPNE1-225ENST00000483495 PIGWQ7Z7B1 504 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 DEFB128Q7Z7B8 93 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 ZNF683Q8IZ20 524 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 DEPDC1BQ8WUY9 529 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 ARNTL2Q8WYA1 636 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 CELF6Q96J87 481 aaKnown RBP13.57□□□□□ -0.24
CPNE1-225ENST00000483495 TEKT5Q96M29 485 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 MAGEB18Q96M61 343 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 NAT9Q9BTE0 207 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 TLR8Q9NR97 1041 aaKnown RBP13.57□□□□□ -0.24
CPNE1-225ENST00000483495 MTRRQ9UBK8 725 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 SLC27A5Q9Y2P5 690 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 BACE2Q9Y5Z0 518 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 MAD1L1Q9Y6D9 718 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 IKBKGQ9Y6K9 419 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 SPAG7O75391 227 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 SOAT2O75908 522 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 KRT4P19013 534 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 ALDH7A1P49419 539 aaKnown RBP13.57□□□□□ -0.24
CPNE1-225ENST00000483495 TUBP50607 506 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 TBX4P57082 545 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 IL9RQ01113 521 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 TAF10Q12962 218 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 TRIP4Q15650 581 aaPredicted RBP13.57□□□□□ -0.24
CPNE1-225ENST00000483495 PIK3R6Q5UE93 754 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 C6orf89Q6UWU4 347 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 SH2D5Q6ZV89 423 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 MICALCLQ6ZW33 695 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 LRRC49Q8IUZ0 686 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 C4orf33Q8N1A6 199 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 RTL3Q8N8U3 475 aaKnown RBP13.57□□□□□ -0.24
CPNE1-225ENST00000483495 FBXO22Q8NEZ5 403 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 GPR152Q8TDT2 470 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 SEC16BQ96JE7 1060 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 SEPT5Q99719 369 aaPredicted RBP13.57□□□□□ -0.24
CPNE1-225ENST00000483495 TTLL2Q9BWV7 592 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 SMYD2Q9NRG4 433 aa13.57□□□□□ -0.24
CPNE1-225ENST00000483495 CXorf49A8MYA2 514 aaPredicted RBP13.56□□□□□ -0.24
CPNE1-225ENST00000483495 F5H423 210 aaPredicted RBP13.56□□□□□ -0.24
CPNE1-225ENST00000483495 ZWINTO95229 277 aa13.56□□□□□ -0.24
CPNE1-225ENST00000483495 IGLV3-27P01718 113 aa13.56□□□□□ -0.24
CPNE1-225ENST00000483495 PGAM1P18669 254 aa13.56□□□□□ -0.24
CPNE1-225ENST00000483495 RFC2P35250 354 aa13.56□□□□□ -0.24
CPNE1-225ENST00000483495 SLC18A2Q05940 514 aa13.56□□□□□ -0.24
CPNE1-225ENST00000483495 DUSP4Q13115 394 aa13.56□□□□□ -0.24
CPNE1-225ENST00000483495 USP41Q3LFD5 358 aa13.56□□□□□ -0.24
CPNE1-225ENST00000483495 RASIP1Q5U651 963 aa13.56□□□□□ -0.24
CPNE1-225ENST00000483495 PRSS55Q6UWB4 352 aaPredicted RBP13.56□□□□□ -0.24
CPNE1-225ENST00000483495 C14orf80Q86SX3 495 aa13.56□□□□□ -0.24
CPNE1-225ENST00000483495 BANPQ8N9N5 519 aa13.56□□□□□ -0.24
CPNE1-225ENST00000483495 TTC17Q96AE7 1141 aa13.56□□□□□ -0.24
CPNE1-225ENST00000483495 IGSF21Q96ID5 467 aa13.56□□□□□ -0.24
CPNE1-225ENST00000483495 MLPHQ9BV36 600 aaPredicted RBP13.56□□□□□ -0.24
CPNE1-225ENST00000483495 VN1R3Q9BXE9 311 aa13.56□□□□□ -0.24
CPNE1-225ENST00000483495 NSRP1Q9H0G5 558 aaKnown RBP13.56□□□□□ -0.24
CPNE1-225ENST00000483495 MLXIPLQ9NP71 852 aa13.56□□□□□ -0.24
CPNE1-225ENST00000483495 CASS4Q9NQ75 786 aa13.56□□□□□ -0.24
CPNE1-225ENST00000483495 PRDM5Q9NQX1 630 aaPredicted RBP13.56□□□□□ -0.24
CPNE1-225ENST00000483495 PPARGC1AQ9UBK2 798 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms