RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 MMRN1Q13201 1228 aa18.35■□□□□ 0.53
CPNE1-224ENST00000483359 GEN1Q17RS7 908 aa18.35■□□□□ 0.53
CPNE1-224ENST00000483359 ZNF662Q6ZS27 426 aa18.35■□□□□ 0.53
CPNE1-224ENST00000483359 RFX8Q6ZV50 586 aa18.35■□□□□ 0.53
CPNE1-224ENST00000483359 PEX26Q7Z412 305 aa18.35■□□□□ 0.53
CPNE1-224ENST00000483359 POLNQ7Z5Q5 900 aa18.35■□□□□ 0.53
CPNE1-224ENST00000483359 REXO1L1PQ8IX06 675 aa18.35■□□□□ 0.53
CPNE1-224ENST00000483359 PHTF2Q8N3S3 785 aa18.35■□□□□ 0.53
CPNE1-224ENST00000483359 OR52K2Q8NGK3 314 aa18.35■□□□□ 0.53
CPNE1-224ENST00000483359 RAPGEF5Q92565 580 aa18.35■□□□□ 0.53
CPNE1-224ENST00000483359 MSANTD3Q96H12 275 aa18.35■□□□□ 0.53
CPNE1-224ENST00000483359 DOCK4Q8N1I0 1966 aa18.35■□□□□ 0.53
CPNE1-224ENST00000483359 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.35■□□□□ 0.53
CPNE1-224ENST00000483359 KANSL1LA0AUZ9 987 aa18.35■□□□□ 0.53
CPNE1-224ENST00000483359 LRRD1A4D1F6 860 aa18.35■□□□□ 0.53
CPNE1-224ENST00000483359 TBC1D3BA6NDS4 549 aa18.35■□□□□ 0.53
CPNE1-224ENST00000483359 EGFP01133 1207 aa18.35■□□□□ 0.53
CPNE1-224ENST00000483359 OR1E1P30953 314 aa18.35■□□□□ 0.53
CPNE1-224ENST00000483359 ARL4AP40617 200 aa18.35■□□□□ 0.53
CPNE1-224ENST00000483359 EIF2DP41214 584 aaKnown RBP18.35■□□□□ 0.53
CPNE1-224ENST00000483359 STARD6P59095 220 aa18.35■□□□□ 0.53
CPNE1-224ENST00000483359 GRSF1Q12849 480 aaKnown RBP eCLIP18.35■□□□□ 0.533e-10■□□□□ 10.9
CPNE1-224ENST00000483359 LMAN2Q12907 356 aa18.35■□□□□ 0.53
CPNE1-224ENST00000483359 ZNF177Q13360 481 aaPredicted RBP18.35■□□□□ 0.53
CPNE1-224ENST00000483359 FSTL4Q6MZW2 842 aa18.35■□□□□ 0.53
CPNE1-224ENST00000483359 CXorf57Q6NSI4 855 aaKnown RBP18.35■□□□□ 0.53
CPNE1-224ENST00000483359 CHST9Q7L1S5 443 aa18.35■□□□□ 0.53
CPNE1-224ENST00000483359 SYCE1Q8N0S2 351 aa18.35■□□□□ 0.53
CPNE1-224ENST00000483359 TERB1Q8NA31 727 aa18.35■□□□□ 0.53
CPNE1-224ENST00000483359 LTB4R2Q9NPC1 389 aa18.35■□□□□ 0.53
CPNE1-224ENST00000483359 RBM12Q9NTZ6 932 aaKnown RBP18.35■□□□□ 0.53
CPNE1-224ENST00000483359 GGA2Q9UJY4 613 aa18.35■□□□□ 0.53
CPNE1-224ENST00000483359 PSTPIP1O43586 416 aa18.34■□□□□ 0.53
CPNE1-224ENST00000483359 APODP05090 189 aa18.34■□□□□ 0.53
CPNE1-224ENST00000483359 CISD3P0C7P0 127 aa18.34■□□□□ 0.53
CPNE1-224ENST00000483359 SEC13P55735 322 aa18.34■□□□□ 0.53
CPNE1-224ENST00000483359 DPYSL3Q14195 570 aa18.34■□□□□ 0.53
CPNE1-224ENST00000483359 ODF2Q5BJF6 829 aa18.34■□□□□ 0.53
CPNE1-224ENST00000483359 TMEM196Q5HYL7 178 aa18.34■□□□□ 0.53
CPNE1-224ENST00000483359 RNF43Q68DV7 783 aa18.34■□□□□ 0.53
CPNE1-224ENST00000483359 NT5DC3Q86UY8 548 aa18.34■□□□□ 0.53
CPNE1-224ENST00000483359 C17orf53Q8N3J3 647 aaPredicted RBP18.34■□□□□ 0.53
CPNE1-224ENST00000483359 FIBINQ8TAL6 211 aa18.34■□□□□ 0.53
CPNE1-224ENST00000483359 EZH1Q92800 747 aaPredicted RBP18.34■□□□□ 0.53
CPNE1-224ENST00000483359 RNF25Q96BH1 459 aaPredicted RBP18.34■□□□□ 0.53
CPNE1-224ENST00000483359 ALS2CR12Q96Q35 445 aa18.34■□□□□ 0.53
CPNE1-224ENST00000483359 ZDHHC4Q9NPG8 344 aa18.34■□□□□ 0.53
CPNE1-224ENST00000483359 FBXO10Q9UK96 956 aa18.34■□□□□ 0.53
CPNE1-224ENST00000483359 AMFRQ9UKV5 643 aa18.34■□□□□ 0.53
CPNE1-224ENST00000483359 TMEM221A6NGB7 291 aa18.33■□□□□ 0.53
CPNE1-224ENST00000483359 H3BRJ5 948 aa18.33■□□□□ 0.53
CPNE1-224ENST00000483359 M0R296 226 aa18.33■□□□□ 0.53
CPNE1-224ENST00000483359 RHOCP08134 193 aa18.33■□□□□ 0.53
CPNE1-224ENST00000483359 RHOQP17081 205 aa18.33■□□□□ 0.53
CPNE1-224ENST00000483359 HOXC13P31276 330 aa18.33■□□□□ 0.53
CPNE1-224ENST00000483359 CSKP41240 450 aa18.33■□□□□ 0.53
CPNE1-224ENST00000483359 LLGL1Q15334 1064 aa18.33■□□□□ 0.53
CPNE1-224ENST00000483359 LRRC38Q5VT99 294 aa18.33■□□□□ 0.53
CPNE1-224ENST00000483359 C1orf228Q6PIY5 440 aa18.33■□□□□ 0.53
CPNE1-224ENST00000483359 ANKS1BQ7Z6G8 1248 aa18.33■□□□□ 0.53
CPNE1-224ENST00000483359 NLRP14Q86W24 1093 aa18.33■□□□□ 0.53
CPNE1-224ENST00000483359 CSPG4P5Q96PW8 444 aa18.33■□□□□ 0.53
CPNE1-224ENST00000483359 CATSPERBQ9H7T0 1116 aa18.33■□□□□ 0.53
CPNE1-224ENST00000483359 FAM170BA6NMN3 283 aa18.33■□□□□ 0.52
CPNE1-224ENST00000483359 PRRT4C9JH25 899 aa18.33■□□□□ 0.52
CPNE1-224ENST00000483359 PABPC1P11940 636 aaKnown RBP18.33■□□□□ 0.52
CPNE1-224ENST00000483359 MZF1P28698 734 aaPredicted RBP18.33■□□□□ 0.52
CPNE1-224ENST00000483359 CTNNA1P35221 906 aaKnown RBP18.33■□□□□ 0.52
CPNE1-224ENST00000483359 GRIA2P42262 883 aa18.33■□□□□ 0.52
CPNE1-224ENST00000483359 ARSEP51690 589 aa18.33■□□□□ 0.52
CPNE1-224ENST00000483359 FUT11Q495W5 492 aa18.33■□□□□ 0.52
CPNE1-224ENST00000483359 NETO2Q8NC67 525 aa18.33■□□□□ 0.52
CPNE1-224ENST00000483359 EXOC4Q96A65 974 aa18.33■□□□□ 0.52
CPNE1-224ENST00000483359 SLC2A11Q9BYW1 496 aa18.33■□□□□ 0.52
CPNE1-224ENST00000483359 CIPCQ9C0C6 399 aa18.33■□□□□ 0.52
CPNE1-224ENST00000483359 MUC3BQ9H195 1237 aa18.33■□□□□ 0.52
CPNE1-224ENST00000483359 TMEM248Q9NWD8 314 aa18.33■□□□□ 0.52
CPNE1-224ENST00000483359 ZNF212Q9UDV6 495 aa18.33■□□□□ 0.52
CPNE1-224ENST00000483359 MRPS17Q9Y2R5 130 aaKnown RBP18.33■□□□□ 0.52
CPNE1-224ENST00000483359 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.33■□□□□ 0.52
CPNE1-224ENST00000483359 MFHAS1Q9Y4C4 1052 aa18.33■□□□□ 0.52
CPNE1-224ENST00000483359 FAM86C2PA6NEL3 165 aa18.32■□□□□ 0.52
CPNE1-224ENST00000483359 FGF10O15520 208 aaPredicted RBP18.32■□□□□ 0.52
CPNE1-224ENST00000483359 ERCC2P18074 760 aa18.32■□□□□ 0.52
CPNE1-224ENST00000483359 AMPD1P23109 780 aa18.32■□□□□ 0.52
CPNE1-224ENST00000483359 KDELR1P24390 212 aa18.32■□□□□ 0.52
CPNE1-224ENST00000483359 C6orf118Q5T5N4 469 aa18.32■□□□□ 0.52
CPNE1-224ENST00000483359 RNF219Q5W0B1 726 aaPredicted RBP18.32■□□□□ 0.52
CPNE1-224ENST00000483359 CWF19L1Q69YN2 538 aaKnown RBP18.32■□□□□ 0.52
CPNE1-224ENST00000483359 CCDC50Q8IVM0 306 aa18.32■□□□□ 0.52
CPNE1-224ENST00000483359 RTL3Q8N8U3 475 aaKnown RBP18.32■□□□□ 0.52
CPNE1-224ENST00000483359 KIAA1522Q9P206 1035 aaPredicted RBP18.32■□□□□ 0.52
CPNE1-224ENST00000483359 SLC27A6Q9Y2P4 619 aa18.32■□□□□ 0.52
CPNE1-224ENST00000483359 A0A0D9SEW6 157 aa18.31■□□□□ 0.52
CPNE1-224ENST00000483359 DRD1P21728 446 aa18.31■□□□□ 0.52
CPNE1-224ENST00000483359 IL4RP24394 825 aa18.31■□□□□ 0.52
CPNE1-224ENST00000483359 CCINQ13939 588 aa18.31■□□□□ 0.52
CPNE1-224ENST00000483359 DPYSQ14117 519 aa18.31■□□□□ 0.52
CPNE1-224ENST00000483359 PDK2Q15119 407 aa18.31■□□□□ 0.52
CPNE1-224ENST00000483359 TMEM215Q68D42 235 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms