RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 DUSP23Q9BVJ7 150 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 TXLNGYQ9BZA5 131 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 LHX5Q9H2C1 402 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 RPF1Q9H9Y2 349 aaKnown RBP8.05□□□□□ -1.12
SNX13-208ENST00000482558 ZDHHC18Q9NUE0 388 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 RAPGEFL1Q9UHV5 662 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 GJD2Q9UKL4 321 aa8.05□□□□□ -1.12
SNX13-208ENST00000482558 ATXN2Q99700 1313 aaKnown RBP8.04□□□□□ -1.12
SNX13-208ENST00000482558 POLR2AP24928 1970 aaKnown RBP8.04□□□□□ -1.12
SNX13-208ENST00000482558 ZSCAN5CA6NGD5 496 aaPredicted RBP8.04□□□□□ -1.12
SNX13-208ENST00000482558 ZNF891A8MT65 544 aaPredicted RBP8.04□□□□□ -1.12
SNX13-208ENST00000482558 ADM5C9JUS6 153 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 H0YGN5 161 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 EBAG9O00559 213 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 RGS13O14921 159 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 NCAM2O15394 837 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 FAM189A1O60320 539 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 TJP3O95049 919 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 CPP00450 1065 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 FAM200BP0CF97 657 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 SRGAP2CP0DJJ0 459 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 DESP17661 470 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 EPHX2P34913 555 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 LSSP48449 732 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 GSCP56915 257 aaPredicted RBP8.04□□□□□ -1.12
SNX13-208ENST00000482558 OCRLQ01968 901 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 MAMLD1Q13495 774 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 PTK6Q13882 451 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 MLANAQ16655 118 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 LY6KQ17RY6 165 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 ZNF699Q32M78 642 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 ZNF568Q3ZCX4 644 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 ODF2Q5BJF6 829 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 TTMPQ5BVD1 217 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 NAA35Q5VZE5 725 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 RETSATQ6NUM9 610 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 LRRC31Q6UY01 552 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 POLNQ7Z5Q5 900 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 C11orf74Q86VG3 221 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 ZNF410Q86VK4 478 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 DNAAF5Q86Y56 855 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 NIPA2Q8N8Q9 360 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 SMC1BQ8NDV3 1235 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 PPTC7Q8NI37 304 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 IPO4Q8TEX9 1081 aaKnown RBP8.04□□□□□ -1.12
SNX13-208ENST00000482558 FNIP1Q8TF40 1166 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 ZNF606Q8WXB4 792 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 KRT35Q92764 455 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 PTPRN2Q92932 1015 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 ART4Q93070 314 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 CENPTQ96BT3 561 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 ZBTB10Q96DT7 871 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 CYFIP2Q96F07 1278 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 SNF8Q96H20 258 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 MIPEPQ99797 713 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 PI4K2AQ9BTU6 479 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 DERAQ9Y315 318 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 NFS1Q9Y697 457 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 OTOFQ9HC10 1997 aa8.04□□□□□ -1.12
SNX13-208ENST00000482558 MROH7Q68CQ1 1323 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 LRRC37A2A6NM11 1700 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 RRN3P2A6NIE6 340 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 RASA4BC9J798 803 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 INO80B-WBP1J3KQ70 363 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 ABLIM1O14639 778 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 PRRG2O14669 202 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 RASA4O43374 803 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 XPOTO43592 962 aaKnown RBP8.03□□□□□ -1.12
SNX13-208ENST00000482558 BAIAP3O94812 1187 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 AGTP01019 485 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 KRT14P02533 472 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 KRT7P08729 469 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 MDH1P40925 334 aaKnown RBP8.03□□□□□ -1.12
SNX13-208ENST00000482558 PLTPP55058 493 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 GNGT1P63211 74 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 MRPS25P82663 173 aaKnown RBP8.03□□□□□ -1.12
SNX13-208ENST00000482558 LACTBP83111 547 aaPredicted RBP8.03□□□□□ -1.12
SNX13-208ENST00000482558 ZNF844Q08AG5 666 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 MOGSQ13724 837 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 HADHQ16836 314 aaKnown RBP8.03□□□□□ -1.12
SNX13-208ENST00000482558 DCAF4L1Q3SXM0 396 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 HSDL1Q3SXM5 330 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 ZNF667Q5HYK9 610 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 EFCAB12Q6NXP0 572 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 DNAJC24Q6P3W2 148 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 DCUN1D2Q6PH85 259 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 MAMDC4Q6UXC1 1216 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 C4orf50Q6ZRC1 276 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 CCDC149Q6ZUS6 474 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 ZNF365Q70YC5 407 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 TAOK1Q7L7X3 1001 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 DDX53Q86TM3 631 aaKnown RBP8.03□□□□□ -1.12
SNX13-208ENST00000482558 ERICH1Q86X53 443 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 RHPN2Q8IUC4 686 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 FAM26EQ8N5C1 309 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 CPA5Q8WXQ8 436 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 RIN2Q8WYP3 895 aaPredicted RBP8.03□□□□□ -1.12
SNX13-208ENST00000482558 ARL8AQ96BM9 186 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 C18orf8Q96DM3 657 aa8.03□□□□□ -1.12
SNX13-208ENST00000482558 ZBTB45Q96K62 511 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms