RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 GLE1Q53GS7 698 aaKnown RBP6.32□□□□□ -1.4
SF3B1-210ENST00000482158 INTS11Q5TA45 600 aaKnown RBP6.32□□□□□ -1.4
SF3B1-210ENST00000482158 JAKMIP3Q5VZ66 844 aa6.32□□□□□ -1.4
SF3B1-210ENST00000482158 ATG16L1Q676U5 607 aa6.32□□□□□ -1.4
SF3B1-210ENST00000482158 ANO7Q6IWH7 933 aa6.32□□□□□ -1.4
SF3B1-210ENST00000482158 MTFR2Q6P444 385 aa6.32□□□□□ -1.4
SF3B1-210ENST00000482158 DHRS13Q6UX07 377 aa6.32□□□□□ -1.4
SF3B1-210ENST00000482158 ZNF813Q6ZN06 617 aa6.32□□□□□ -1.4
SF3B1-210ENST00000482158 ZNF66Q6ZN08 573 aa6.32□□□□□ -1.4
SF3B1-210ENST00000482158 RBM44Q6ZP01 1051 aaKnown RBP6.32□□□□□ -1.4
SF3B1-210ENST00000482158 PRIMA1Q86XR5 153 aa6.32□□□□□ -1.4
SF3B1-210ENST00000482158 SCN4BQ8IWT1 228 aa6.32□□□□□ -1.4
SF3B1-210ENST00000482158 IGFBPL1Q8WX77 278 aa6.32□□□□□ -1.4
SF3B1-210ENST00000482158 KCNJ9Q92806 393 aa6.32□□□□□ -1.4
SF3B1-210ENST00000482158 ZNF764Q96H86 408 aaPredicted RBP6.32□□□□□ -1.4
SF3B1-210ENST00000482158 PHF7Q9BWX1 381 aaPredicted RBP6.32□□□□□ -1.4
SF3B1-210ENST00000482158 TRIM2Q9C040 744 aa6.32□□□□□ -1.4
SF3B1-210ENST00000482158 THAP1Q9NVV9 213 aa6.32□□□□□ -1.4
SF3B1-210ENST00000482158 PKP3Q9Y446 797 aa6.32□□□□□ -1.4
SF3B1-210ENST00000482158 COX11Q9Y6N1 276 aa6.32□□□□□ -1.4
SF3B1-210ENST00000482158 ST6GAL1P15907 406 aa6.31□□□□□ -1.4
SF3B1-210ENST00000482158 HOXA7P31268 230 aaPredicted RBP6.31□□□□□ -1.4
SF3B1-210ENST00000482158 MVDP53602 400 aa6.31□□□□□ -1.4
SF3B1-210ENST00000482158 TRPC3Q13507 836 aa6.31□□□□□ -1.4
SF3B1-210ENST00000482158 ANXA2RQ3ZCQ2 193 aa6.31□□□□□ -1.4
SF3B1-210ENST00000482158 WDR45BQ5MNZ6 344 aa6.31□□□□□ -1.4
SF3B1-210ENST00000482158 DENND1BQ6P3S1 775 aa6.31□□□□□ -1.4
SF3B1-210ENST00000482158 RD3Q7Z3Z2 195 aa6.31□□□□□ -1.4
SF3B1-210ENST00000482158 HEATR4Q86WZ0 1026 aa6.31□□□□□ -1.4
SF3B1-210ENST00000482158 ADGRG3Q86Y34 549 aa6.31□□□□□ -1.4
SF3B1-210ENST00000482158 OR52N4Q8NGI2 321 aa6.31□□□□□ -1.4
SF3B1-210ENST00000482158 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.31□□□□□ -1.4
SF3B1-210ENST00000482158 FAM110DQ8TAY7 271 aaPredicted RBP6.31□□□□□ -1.4
SF3B1-210ENST00000482158 C2CD4CQ8TF44 421 aa6.31□□□□□ -1.4
SF3B1-210ENST00000482158 HASPINQ8TF76 798 aa6.31□□□□□ -1.4
SF3B1-210ENST00000482158 MAP4K1Q92918 833 aa6.31□□□□□ -1.4
SF3B1-210ENST00000482158 C5orf34Q96MH7 638 aa6.31□□□□□ -1.4
SF3B1-210ENST00000482158 GPR63Q9BZJ6 419 aa6.31□□□□□ -1.4
SF3B1-210ENST00000482158 IL21RQ9HBE5 538 aa6.31□□□□□ -1.4
SF3B1-210ENST00000482158 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.31□□□□□ -1.43e-11■■□□□ 13.1
SF3B1-210ENST00000482158 ZNF69Q9UC07 566 aa6.31□□□□□ -1.4
SF3B1-210ENST00000482158 KLQ9UEF7 1012 aa6.31□□□□□ -1.4
SF3B1-210ENST00000482158 CD207Q9UJ71 328 aa6.31□□□□□ -1.4
SF3B1-210ENST00000482158 SLC13A4Q9UKG4 626 aa6.31□□□□□ -1.4
SF3B1-210ENST00000482158 AFG3L2Q9Y4W6 797 aa6.31□□□□□ -1.4
SF3B1-210ENST00000482158 EMSYQ7Z589 1322 aa6.3□□□□□ -1.4
SF3B1-210ENST00000482158 C17orf100A8MU93 164 aa6.3□□□□□ -1.4
SF3B1-210ENST00000482158 MCIDASD6RGH6 385 aa6.3□□□□□ -1.4
SF3B1-210ENST00000482158 TSPAN3O60637 253 aa6.3□□□□□ -1.4
SF3B1-210ENST00000482158 PLAUP00749 431 aa6.3□□□□□ -1.4
SF3B1-210ENST00000482158 LIFRP42702 1097 aa6.3□□□□□ -1.4
SF3B1-210ENST00000482158 VAMP2P63027 116 aa6.3□□□□□ -1.4
SF3B1-210ENST00000482158 ZBTB16Q05516 673 aa6.3□□□□□ -1.4
SF3B1-210ENST00000482158 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.3□□□□□ -1.4
SF3B1-210ENST00000482158 ALKBH1Q13686 389 aaKnown RBP6.3□□□□□ -1.4
SF3B1-210ENST00000482158 TMEM200AQ86VY9 491 aa6.3□□□□□ -1.4
SF3B1-210ENST00000482158 PAQR4Q8N4S7 273 aaPredicted RBP6.3□□□□□ -1.4
SF3B1-210ENST00000482158 STAMQ92783 540 aa6.3□□□□□ -1.4
SF3B1-210ENST00000482158 PPM1MQ96MI6 270 aa6.3□□□□□ -1.4
SF3B1-210ENST00000482158 CTDSP1Q9GZU7 261 aa6.3□□□□□ -1.4
SF3B1-210ENST00000482158 STN1Q9H668 368 aaKnown RBP6.3□□□□□ -1.4
SF3B1-210ENST00000482158 MAFFQ9ULX9 164 aa6.3□□□□□ -1.4
SF3B1-210ENST00000482158 DTX4Q9Y2E6 619 aa6.3□□□□□ -1.4
SF3B1-210ENST00000482158 SLC22A23A1A5C7 686 aa6.29□□□□□ -1.4
SF3B1-210ENST00000482158 FAM90A7PA6NKC0 464 aa6.29□□□□□ -1.4
SF3B1-210ENST00000482158 FAM90A22PA8MWA6 464 aa6.29□□□□□ -1.4
SF3B1-210ENST00000482158 FAM90A12PA8MX19 464 aa6.29□□□□□ -1.4
SF3B1-210ENST00000482158 FAM90A23PA8MXZ1 464 aa6.29□□□□□ -1.4
SF3B1-210ENST00000482158 PRKCGP05129 697 aa6.29□□□□□ -1.4
SF3B1-210ENST00000482158 AKR1A1P14550 325 aa6.29□□□□□ -1.4
SF3B1-210ENST00000482158 PKMP14618 531 aaKnown RBP6.29□□□□□ -1.4
SF3B1-210ENST00000482158 RPS6KB1P23443 525 aa6.29□□□□□ -1.4
SF3B1-210ENST00000482158 TACR3P29371 465 aa6.29□□□□□ -1.4
SF3B1-210ENST00000482158 MTA1Q13330 715 aa6.29□□□□□ -1.4
SF3B1-210ENST00000482158 GPR162Q16538 588 aa6.29□□□□□ -1.4
SF3B1-210ENST00000482158 MEX3CQ5U5Q3 659 aaKnown RBP6.29□□□□□ -1.4
SF3B1-210ENST00000482158 RNF144BQ7Z419 303 aa6.29□□□□□ -1.4
SF3B1-210ENST00000482158 C16orf71Q8IYS4 520 aaPredicted RBP6.29□□□□□ -1.4
SF3B1-210ENST00000482158 ANKRD44Q8N8A2 993 aa6.29□□□□□ -1.4
SF3B1-210ENST00000482158 ARL14EPQ8N8R7 260 aaPredicted RBP6.29□□□□□ -1.4
SF3B1-210ENST00000482158 NAXEQ8NCW5 288 aa6.29□□□□□ -1.4
SF3B1-210ENST00000482158 OSR1Q8TAX0 266 aaPredicted RBP6.29□□□□□ -1.4
SF3B1-210ENST00000482158 ZFPM2Q8WW38 1151 aa6.29□□□□□ -1.4
SF3B1-210ENST00000482158 HVCN1Q96D96 273 aa6.29□□□□□ -1.4
SF3B1-210ENST00000482158 RNFT2Q96EX2 444 aa6.29□□□□□ -1.4
SF3B1-210ENST00000482158 ADAD1Q96M93 576 aaKnown RBP6.29□□□□□ -1.4
SF3B1-210ENST00000482158 MAF1Q9H063 256 aa6.29□□□□□ -1.4
SF3B1-210ENST00000482158 UBN1Q9NPG3 1134 aa6.29□□□□□ -1.4
SF3B1-210ENST00000482158 TMEM248Q9NWD8 314 aa6.29□□□□□ -1.4
SF3B1-210ENST00000482158 HDAC6Q9UBN7 1215 aa6.29□□□□□ -1.4
SF3B1-210ENST00000482158 HSF4Q9ULV5 492 aa6.29□□□□□ -1.4
SF3B1-210ENST00000482158 GDAQ9Y2T3 454 aa6.29□□□□□ -1.4
SF3B1-210ENST00000482158 A6NLC8 198 aa6.28□□□□□ -1.4
SF3B1-210ENST00000482158 SH3BP5O60239 455 aa6.28□□□□□ -1.4
SF3B1-210ENST00000482158 RBMXL2O75526 392 aaKnown RBP6.28□□□□□ -1.4
SF3B1-210ENST00000482158 METTL18O95568 372 aa6.28□□□□□ -1.4
SF3B1-210ENST00000482158 HNRNPA1P09651 372 aaKnown RBP eCLIP6.28□□□□□ -1.4
SF3B1-210ENST00000482158 HOXB9P17482 250 aaPredicted RBP6.28□□□□□ -1.4
SF3B1-210ENST00000482158 CD53P19397 219 aa6.28□□□□□ -1.4
SF3B1-210ENST00000482158 NR1H2P55055 460 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms