RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 PLCD4Q9BRC7 762 aa16.19■□□□□ 0.18
RXRA-202ENST00000481739 VN1R3Q9BXE9 311 aa16.19■□□□□ 0.18
RXRA-202ENST00000481739 TMPRSS4Q9NRS4 437 aa16.19■□□□□ 0.18
RXRA-202ENST00000481739 MFHAS1Q9Y4C4 1052 aa16.19■□□□□ 0.18
RXRA-202ENST00000481739 INSL6Q9Y581 213 aa16.19■□□□□ 0.18
RXRA-202ENST00000481739 PCDHB12Q9Y5F1 795 aa16.19■□□□□ 0.18
RXRA-202ENST00000481739 CARNS1A5YM72 827 aa16.18■□□□□ 0.18
RXRA-202ENST00000481739 FAM72CH0Y354 149 aa16.18■□□□□ 0.18
RXRA-202ENST00000481739 APOEP02649 317 aa16.18■□□□□ 0.18
RXRA-202ENST00000481739 SOD2P04179 222 aa16.18■□□□□ 0.18
RXRA-202ENST00000481739 SLC2A3P11169 496 aa16.18■□□□□ 0.18
RXRA-202ENST00000481739 EPHB2P29323 1055 aa16.18■□□□□ 0.18
RXRA-202ENST00000481739 HOXC13P31276 330 aa16.18■□□□□ 0.18
RXRA-202ENST00000481739 CORO7P57737 925 aa16.18■□□□□ 0.18
RXRA-202ENST00000481739 NRG1Q02297 640 aaPredicted RBP16.18■□□□□ 0.18
RXRA-202ENST00000481739 WASHC5Q12768 1159 aa16.18■□□□□ 0.18
RXRA-202ENST00000481739 IFRD2Q12894 506 aaPredicted RBP16.18■□□□□ 0.18
RXRA-202ENST00000481739 PSMD5Q16401 504 aa16.18■□□□□ 0.18
RXRA-202ENST00000481739 FAM72AQ5TYM5 149 aa16.18■□□□□ 0.18
RXRA-202ENST00000481739 ITPRIPL1Q6GPH6 555 aa16.18■□□□□ 0.18
RXRA-202ENST00000481739 FAM72DQ6L9T8 149 aa16.18■□□□□ 0.18
RXRA-202ENST00000481739 C6orf89Q6UWU4 347 aa16.18■□□□□ 0.18
RXRA-202ENST00000481739 RGS9BPQ6ZS82 235 aa16.18■□□□□ 0.18
RXRA-202ENST00000481739 PIGWQ7Z7B1 504 aa16.18■□□□□ 0.18
RXRA-202ENST00000481739 TAX1BP1Q86VP1 789 aa16.18■□□□□ 0.18
RXRA-202ENST00000481739 FAM72BQ86X60 149 aa16.18■□□□□ 0.18
RXRA-202ENST00000481739 HERC6Q8IVU3 1022 aa16.18■□□□□ 0.18
RXRA-202ENST00000481739 NUP93Q8N1F7 819 aa16.18■□□□□ 0.18
RXRA-202ENST00000481739 DENND1AQ8TEH3 1009 aa16.18■□□□□ 0.18
RXRA-202ENST00000481739 GRAMD1AQ96CP6 724 aa16.18■□□□□ 0.18
RXRA-202ENST00000481739 ABHD8Q96I13 439 aa16.18■□□□□ 0.18
RXRA-202ENST00000481739 SIGLEC10Q96LC7 697 aa16.18■□□□□ 0.18
RXRA-202ENST00000481739 MTIF3Q9H2K0 278 aaKnown RBP16.18■□□□□ 0.18
RXRA-202ENST00000481739 COMMD8Q9NX08 183 aa16.18■□□□□ 0.18
RXRA-202ENST00000481739 FNIP2Q9P278 1114 aa16.18■□□□□ 0.18
RXRA-202ENST00000481739 CDY1Q9Y6F8 540 aa16.18■□□□□ 0.18
RXRA-202ENST00000481739 KIAA1671Q9BY89 1806 aa16.18■□□□□ 0.18
RXRA-202ENST00000481739 I6L893 689 aaPredicted RBP16.17■□□□□ 0.18
RXRA-202ENST00000481739 AP3B1O00203 1094 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 TLL1O43897 1013 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 TYROBPO43914 113 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 AVILO75366 819 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 KRT37O76014 449 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 LRIG2O94898 1065 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 RPL17P18621 184 aaKnown RBP16.17■□□□□ 0.18
RXRA-202ENST00000481739 PPM1AP35813 382 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 HTRA4P83105 476 aaPredicted RBP16.17■□□□□ 0.18
RXRA-202ENST00000481739 NAB1Q13506 487 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 MPP2Q14168 576 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 KBTBD12Q3ZCT8 623 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 ACBD5Q5T8D3 534 aaPredicted RBP16.17■□□□□ 0.18
RXRA-202ENST00000481739 NUGGCQ68CJ6 796 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 MSANTD2Q6P1R3 559 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 ZNF449Q6P9G9 518 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 RSPO2Q6UXX9 243 aaPredicted RBP16.17■□□□□ 0.18
RXRA-202ENST00000481739 LRRC34Q8IZ02 419 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 SCAMP5Q8TAC9 235 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 MGARPQ8TDB4 240 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 MZB1Q8WU39 189 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 MTBPQ96DY7 904 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 CATSPERBQ9H7T0 1116 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 ANLNQ9NQW6 1124 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 DONSONQ9NYP3 566 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 TTLL3Q9Y4R7 772 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 PCDHA11Q9Y5I1 949 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 SDR42E2A6NKP2 422 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 ASMTLO95671 621 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 KRT4P19013 534 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 CA4P22748 312 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 GARSP41250 739 aaKnown RBP16.17■□□□□ 0.18
RXRA-202ENST00000481739 PSEN1P49768 467 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 MTA1Q13330 715 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 LRRC14Q15048 493 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 QPCTQ16769 361 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 STEAP4Q687X5 459 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 LRRC49Q8IUZ0 686 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 ZNF567Q8N184 647 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 ATAD1Q8NBU5 361 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 FBXO22Q8NEZ5 403 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 C2orf15Q8WU43 125 aaKnown RBP16.17■□□□□ 0.18
RXRA-202ENST00000481739 CFAP36Q96G28 342 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 PPP1R2P1Q96PQ5 205 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 RAD9AQ99638 391 aa16.17■□□□□ 0.18
RXRA-202ENST00000481739 KLHL8Q9P2G9 620 aaPredicted RBP16.17■□□□□ 0.18
RXRA-202ENST00000481739 SUN1O94901 812 aa16.16■□□□□ 0.18
RXRA-202ENST00000481739 RTN3O95197 1032 aaPredicted RBP16.16■□□□□ 0.18
RXRA-202ENST00000481739 EFEMP2O95967 443 aa16.16■□□□□ 0.18
RXRA-202ENST00000481739 MT-ND3P03897 115 aa16.16■□□□□ 0.18
RXRA-202ENST00000481739 DNAJB2P25686 324 aa16.16■□□□□ 0.18
RXRA-202ENST00000481739 PTPN3P26045 913 aa16.16■□□□□ 0.18
RXRA-202ENST00000481739 CNTFP26441 200 aa16.16■□□□□ 0.18
RXRA-202ENST00000481739 OR1D2P34982 312 aa16.16■□□□□ 0.18
RXRA-202ENST00000481739 SERPINB9P50453 376 aa16.16■□□□□ 0.18
RXRA-202ENST00000481739 GPR17Q13304 367 aa16.16■□□□□ 0.18
RXRA-202ENST00000481739 EFTUD2Q15029 972 aaKnown RBP eCLIP16.16■□□□□ 0.188e-7■■■■■ 33.5
RXRA-202ENST00000481739 TTC39BQ5VTQ0 682 aaPredicted RBP16.16■□□□□ 0.18
RXRA-202ENST00000481739 RNF19BQ6ZMZ0 732 aa16.16■□□□□ 0.18
RXRA-202ENST00000481739 UNC5AQ6ZN44 842 aa16.16■□□□□ 0.18
RXRA-202ENST00000481739 AGGF1Q8N302 714 aaeCLIP16.16■□□□□ 0.18
RXRA-202ENST00000481739 PHOSPHO2Q8TCD6 241 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms