RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 TMEM191BP0C7N4 346 aa12.38□□□□□ -0.43
USP11-208ENST00000480104 PSMA5P28066 241 aa12.38□□□□□ -0.43
USP11-208ENST00000480104 ETV5P41161 510 aa12.38□□□□□ -0.43
USP11-208ENST00000480104 DEFB133Q30KQ1 61 aa12.38□□□□□ -0.43
USP11-208ENST00000480104 ARSHQ5FYA8 562 aa12.38□□□□□ -0.43
USP11-208ENST00000480104 C9orf64Q5T6V5 341 aa12.38□□□□□ -0.43
USP11-208ENST00000480104 PAQR9Q6ZVX9 377 aa12.38□□□□□ -0.43
USP11-208ENST00000480104 DENND1CQ8IV53 801 aa12.38□□□□□ -0.43
USP11-208ENST00000480104 SLC22A18ASQ8N1D0 253 aa12.38□□□□□ -0.43
USP11-208ENST00000480104 CPXM2Q8N436 756 aa12.38□□□□□ -0.43
USP11-208ENST00000480104 MYCT1Q8N699 235 aa12.38□□□□□ -0.43
USP11-208ENST00000480104 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.38□□□□□ -0.43
USP11-208ENST00000480104 SYT2Q8N9I0 419 aaPredicted RBP12.38□□□□□ -0.43
USP11-208ENST00000480104 TEX19Q8NA77 164 aa12.38□□□□□ -0.43
USP11-208ENST00000480104 ZMIZ2Q8NF64 920 aa12.38□□□□□ -0.43
USP11-208ENST00000480104 SAAL1Q96ER3 474 aa12.38□□□□□ -0.43
USP11-208ENST00000480104 TCTN2Q96GX1 697 aa12.38□□□□□ -0.43
USP11-208ENST00000480104 HEXIM2Q96MH2 286 aaKnown RBP12.38□□□□□ -0.43
USP11-208ENST00000480104 CATSPER2Q96P56 530 aa12.38□□□□□ -0.43
USP11-208ENST00000480104 REEP2Q9BRK0 252 aa12.38□□□□□ -0.43
USP11-208ENST00000480104 MED10Q9BTT4 135 aa12.38□□□□□ -0.43
USP11-208ENST00000480104 FBXO44Q9H4M3 255 aa12.38□□□□□ -0.43
USP11-208ENST00000480104 KRT82Q9NSB4 513 aa12.38□□□□□ -0.43
USP11-208ENST00000480104 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.38□□□□□ -0.43
USP11-208ENST00000480104 RBAKQ9NYW8 714 aaPredicted RBP12.38□□□□□ -0.43
USP11-208ENST00000480104 KCND2Q9NZV8 630 aa12.38□□□□□ -0.43
USP11-208ENST00000480104 R3HCC1Q9Y3T6 440 aaKnown RBP12.38□□□□□ -0.43
USP11-208ENST00000480104 C9orf172C9J069 976 aa12.37□□□□□ -0.43
USP11-208ENST00000480104 D6RAR5 112 aa12.37□□□□□ -0.43
USP11-208ENST00000480104 AP1G2O75843 785 aa12.37□□□□□ -0.43
USP11-208ENST00000480104 LDLRP01130 860 aa12.37□□□□□ -0.43
USP11-208ENST00000480104 FDPSP14324 419 aaKnown RBP12.37□□□□□ -0.43
USP11-208ENST00000480104 PRLRP16471 622 aa12.37□□□□□ -0.43
USP11-208ENST00000480104 DRD3P35462 400 aa12.37□□□□□ -0.43
USP11-208ENST00000480104 METAP1P53582 386 aa12.37□□□□□ -0.43
USP11-208ENST00000480104 HNRNPKP61978 463 aaKnown RBP eCLIP12.37□□□□□ -0.43
USP11-208ENST00000480104 GTF2BQ00403 316 aa12.37□□□□□ -0.43
USP11-208ENST00000480104 ORC2Q13416 577 aaPredicted RBP12.37□□□□□ -0.43
USP11-208ENST00000480104 SETMARQ53H47 684 aaPredicted RBP12.37□□□□□ -0.43
USP11-208ENST00000480104 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.37□□□□□ -0.43
USP11-208ENST00000480104 RUFY3Q7L099 469 aa12.37□□□□□ -0.43
USP11-208ENST00000480104 GPRIN1Q7Z2K8 1008 aa12.37□□□□□ -0.43
USP11-208ENST00000480104 TMPRSS9Q7Z410 1059 aa12.37□□□□□ -0.43
USP11-208ENST00000480104 KIAA0907Q7Z7F0 614 aaPredicted RBP12.37□□□□□ -0.43
USP11-208ENST00000480104 TRIM69Q86WT6 500 aa12.37□□□□□ -0.43
USP11-208ENST00000480104 C4orf32Q8N8J7 132 aa12.37□□□□□ -0.43
USP11-208ENST00000480104 USP7Q93009 1102 aa12.37□□□□□ -0.43
USP11-208ENST00000480104 NAT6Q93015 286 aa12.37□□□□□ -0.43
USP11-208ENST00000480104 SMARCD1Q96GM5 515 aa12.37□□□□□ -0.43
USP11-208ENST00000480104 NOX5Q96PH1 765 aa12.37□□□□□ -0.43
USP11-208ENST00000480104 FIZ1Q96SL8 496 aa12.37□□□□□ -0.43
USP11-208ENST00000480104 DCLK3Q9C098 648 aa12.37□□□□□ -0.43
USP11-208ENST00000480104 UNKQ9C0B0 810 aaKnown RBP12.37□□□□□ -0.43
USP11-208ENST00000480104 PDE11AQ9HCR9 933 aa12.37□□□□□ -0.43
USP11-208ENST00000480104 PRDM8Q9NQV8 689 aa12.37□□□□□ -0.43
USP11-208ENST00000480104 SCN8AQ9UQD0 1980 aa12.36□□□□□ -0.43
USP11-208ENST00000480104 ARHGAP10A1A4S6 786 aa12.36□□□□□ -0.43
USP11-208ENST00000480104 VWA3AA6NCI4 1184 aa12.36□□□□□ -0.43
USP11-208ENST00000480104 A8MXQ7 604 aa12.36□□□□□ -0.43
USP11-208ENST00000480104 K7EM74 188 aa12.36□□□□□ -0.43
USP11-208ENST00000480104 RIOK3O14730 519 aaKnown RBP12.36□□□□□ -0.43
USP11-208ENST00000480104 HNRNPRO43390 633 aaKnown RBP12.36□□□□□ -0.43
USP11-208ENST00000480104 TACC1O75410 805 aa12.36□□□□□ -0.43
USP11-208ENST00000480104 CDC45O75419 566 aa12.36□□□□□ -0.43
USP11-208ENST00000480104 CNTN5O94779 1100 aa12.36□□□□□ -0.43
USP11-208ENST00000480104 FAM13AO94988 1023 aa12.36□□□□□ -0.43
USP11-208ENST00000480104 ADH1BP00325 375 aa12.36□□□□□ -0.43
USP11-208ENST00000480104 PLA2G4BP0C869 781 aa12.36□□□□□ -0.43
USP11-208ENST00000480104 LIFP15018 202 aa12.36□□□□□ -0.43
USP11-208ENST00000480104 C5AR1P21730 350 aa12.36□□□□□ -0.43
USP11-208ENST00000480104 C1QBPQ07021 282 aaKnown RBP12.36□□□□□ -0.43
USP11-208ENST00000480104 DYMQ7RTS9 669 aa12.36□□□□□ -0.43
USP11-208ENST00000480104 TIPARPQ7Z3E1 657 aaKnown RBP12.36□□□□□ -0.43
USP11-208ENST00000480104 FAM217AQ8IXS0 508 aa12.36□□□□□ -0.43
USP11-208ENST00000480104 SLC35F3Q8IY50 421 aa12.36□□□□□ -0.43
USP11-208ENST00000480104 MMP21Q8N119 569 aa12.36□□□□□ -0.43
USP11-208ENST00000480104 SLC34A3Q8N130 599 aa12.36□□□□□ -0.43
USP11-208ENST00000480104 OR5B17Q8NGF7 314 aa12.36□□□□□ -0.43
USP11-208ENST00000480104 CPT1CQ8TCG5 803 aa12.36□□□□□ -0.43
USP11-208ENST00000480104 IFT43Q96FT9 208 aa12.36□□□□□ -0.43
USP11-208ENST00000480104 PPP1R13BQ96KQ4 1090 aa12.36□□□□□ -0.43
USP11-208ENST00000480104 FAM129BQ96TA1 746 aa12.36□□□□□ -0.43
USP11-208ENST00000480104 PLIN2Q99541 437 aa12.36□□□□□ -0.43
USP11-208ENST00000480104 SMOQ99835 787 aa12.36□□□□□ -0.43
USP11-208ENST00000480104 RAB34Q9BZG1 259 aa12.36□□□□□ -0.43
USP11-208ENST00000480104 PARVGQ9HBI0 331 aa12.36□□□□□ -0.43
USP11-208ENST00000480104 RASAL2Q9UJF2 1139 aa12.36□□□□□ -0.43
USP11-208ENST00000480104 ODF2LQ9ULJ1 636 aa12.36□□□□□ -0.43
USP11-208ENST00000480104 SCML2Q9UQR0 700 aa12.36□□□□□ -0.43
USP11-208ENST00000480104 NBEAL1Q6ZS30 2694 aa12.35□□□□□ -0.43
USP11-208ENST00000480104 TTLL8A6PVC2 850 aa12.35□□□□□ -0.43
USP11-208ENST00000480104 ZNF891A8MT65 544 aaPredicted RBP12.35□□□□□ -0.43
USP11-208ENST00000480104 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.35□□□□□ -0.43
USP11-208ENST00000480104 TMX2-CTNND1H3BSU7 103 aa12.35□□□□□ -0.43
USP11-208ENST00000480104 SLC31A1O15431 190 aa12.35□□□□□ -0.43
USP11-208ENST00000480104 BEST1O76090 585 aa12.35□□□□□ -0.43
USP11-208ENST00000480104 PRKAR1AP10644 381 aa12.35□□□□□ -0.43
USP11-208ENST00000480104 POLR2EP19388 210 aaKnown RBP12.35□□□□□ -0.43
USP11-208ENST00000480104 CD82P27701 267 aa12.35□□□□□ -0.43
USP11-208ENST00000480104 CCKBRP32239 447 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms