RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 NIPAL4Q0D2K0 466 aa12.46□□□□□ -0.41
PRPF39-203ENST00000477626 DARS2Q6PI48 645 aaKnown RBP12.46□□□□□ -0.41
PRPF39-203ENST00000477626 SPRED2Q7Z698 418 aa12.46□□□□□ -0.41
PRPF39-203ENST00000477626 TMEM199Q8N511 208 aa12.46□□□□□ -0.41
PRPF39-203ENST00000477626 DENND1AQ8TEH3 1009 aa12.46□□□□□ -0.41
PRPF39-203ENST00000477626 SLC39A8Q9C0K1 460 aa12.46□□□□□ -0.41
PRPF39-203ENST00000477626 ACSS3Q9H6R3 686 aa12.46□□□□□ -0.41
PRPF39-203ENST00000477626 CASS4Q9NQ75 786 aa12.46□□□□□ -0.41
PRPF39-203ENST00000477626 DNMT3BQ9UBC3 853 aaKnown RBP12.46□□□□□ -0.41
PRPF39-203ENST00000477626 HEY1Q9Y5J3 304 aa12.46□□□□□ -0.41
PRPF39-203ENST00000477626 RNF103O00237 685 aa12.46□□□□□ -0.42
PRPF39-203ENST00000477626 TEX28O15482 410 aa12.46□□□□□ -0.42
PRPF39-203ENST00000477626 OPA1O60313 960 aa12.46□□□□□ -0.42
PRPF39-203ENST00000477626 CCNCP24863 283 aa12.46□□□□□ -0.42
PRPF39-203ENST00000477626 ALDH7A1P49419 539 aaKnown RBP12.46□□□□□ -0.42
PRPF39-203ENST00000477626 CALCOCO2Q13137 446 aa12.46□□□□□ -0.42
PRPF39-203ENST00000477626 ALFQ53S48 1182 aa12.46□□□□□ -0.42
PRPF39-203ENST00000477626 CEP85LQ5SZL2 805 aa12.46□□□□□ -0.42
PRPF39-203ENST00000477626 LRRC8BQ6P9F7 803 aa12.46□□□□□ -0.42
PRPF39-203ENST00000477626 CCDC33Q8N5R6 958 aa12.46□□□□□ -0.42
PRPF39-203ENST00000477626 OLA1Q9NTK5 396 aaKnown RBP12.46□□□□□ -0.42
PRPF39-203ENST00000477626 HBS1LQ9Y450 684 aaKnown RBP12.46□□□□□ -0.42
PRPF39-203ENST00000477626 POU2F2P09086 479 aa12.45□□□□□ -0.42
PRPF39-203ENST00000477626 VPS41P49754 854 aa12.45□□□□□ -0.42
PRPF39-203ENST00000477626 SGSHP51688 502 aa12.45□□□□□ -0.42
PRPF39-203ENST00000477626 ACBD5Q5T8D3 534 aaPredicted RBP12.45□□□□□ -0.42
PRPF39-203ENST00000477626 ADGRD1Q6QNK2 874 aa12.45□□□□□ -0.42
PRPF39-203ENST00000477626 UBLCP1Q8WVY7 318 aaPredicted RBP12.45□□□□□ -0.42
PRPF39-203ENST00000477626 TEKT5Q96M29 485 aa12.45□□□□□ -0.42
PRPF39-203ENST00000477626 FRMD8Q9BZ67 464 aaPredicted RBP12.45□□□□□ -0.42
PRPF39-203ENST00000477626 SPG21Q9NZD8 308 aa12.45□□□□□ -0.42
PRPF39-203ENST00000477626 STK39Q9UEW8 545 aa12.45□□□□□ -0.42
PRPF39-203ENST00000477626 ZNF189O75820 626 aaPredicted RBP12.45□□□□□ -0.42
PRPF39-203ENST00000477626 CD160O95971 181 aa12.45□□□□□ -0.42
PRPF39-203ENST00000477626 PDK1Q15118 436 aa12.45□□□□□ -0.42
PRPF39-203ENST00000477626 ZNF449Q6P9G9 518 aa12.45□□□□□ -0.42
PRPF39-203ENST00000477626 CEP57Q86XR8 500 aa12.45□□□□□ -0.42
PRPF39-203ENST00000477626 CCDC117Q8IWD4 279 aaPredicted RBP12.45□□□□□ -0.42
PRPF39-203ENST00000477626 RIN3Q8TB24 985 aa12.45□□□□□ -0.42
PRPF39-203ENST00000477626 PHOSPHO2Q8TCD6 241 aa12.45□□□□□ -0.42
PRPF39-203ENST00000477626 BADQ92934 168 aa12.45□□□□□ -0.42
PRPF39-203ENST00000477626 CENPTQ96BT3 561 aa12.45□□□□□ -0.42
PRPF39-203ENST00000477626 MAK16Q9BXY0 300 aaKnown RBP12.45□□□□□ -0.42
PRPF39-203ENST00000477626 ACTL7BQ9Y614 415 aa12.45□□□□□ -0.42
PRPF39-203ENST00000477626 CNTN5O94779 1100 aa12.45□□□□□ -0.42
PRPF39-203ENST00000477626 CREB1P16220 341 aa12.45□□□□□ -0.42
PRPF39-203ENST00000477626 CDK16Q00536 496 aa12.45□□□□□ -0.42
PRPF39-203ENST00000477626 EFTUD2Q15029 972 aaKnown RBP eCLIP12.45□□□□□ -0.423e-10■■■■□ 25.3
PRPF39-203ENST00000477626 HIF1AQ16665 826 aa12.45□□□□□ -0.42
PRPF39-203ENST00000477626 PARP6Q2NL67 630 aa12.45□□□□□ -0.42
PRPF39-203ENST00000477626 PRPF39Q86UA1 669 aaKnown RBP12.45□□□□□ -0.42
PRPF39-203ENST00000477626 PGBD5Q8N414 524 aa12.45□□□□□ -0.42
PRPF39-203ENST00000477626 ZBTB9Q96C00 473 aa12.45□□□□□ -0.42
PRPF39-203ENST00000477626 BTN2A3PQ96KV6 586 aa12.45□□□□□ -0.42
PRPF39-203ENST00000477626 TTC25Q96NG3 672 aa12.45□□□□□ -0.42
PRPF39-203ENST00000477626 TLR8Q9NR97 1041 aaKnown RBP12.45□□□□□ -0.42
PRPF39-203ENST00000477626 VPS18Q9P253 973 aa12.45□□□□□ -0.42
PRPF39-203ENST00000477626 NUDT5Q9UKK9 219 aa12.45□□□□□ -0.42
PRPF39-203ENST00000477626 OR51B4Q9Y5P0 310 aa12.45□□□□□ -0.42
PRPF39-203ENST00000477626 FAM159BA6NKW6 160 aa12.44□□□□□ -0.42
PRPF39-203ENST00000477626 TYROBPO43914 113 aa12.44□□□□□ -0.42
PRPF39-203ENST00000477626 FGF18O76093 207 aa12.44□□□□□ -0.42
PRPF39-203ENST00000477626 AGTP01019 485 aa12.44□□□□□ -0.42
PRPF39-203ENST00000477626 ARL4AP40617 200 aa12.44□□□□□ -0.42
PRPF39-203ENST00000477626 CLCN4P51793 760 aa12.44□□□□□ -0.42
PRPF39-203ENST00000477626 NDST2P52849 883 aa12.44□□□□□ -0.42
PRPF39-203ENST00000477626 BTBD8Q5XKL5 378 aa12.44□□□□□ -0.42
PRPF39-203ENST00000477626 FBXL22Q6P050 247 aa12.44□□□□□ -0.42
PRPF39-203ENST00000477626 C9orf72Q96LT7 481 aa12.44□□□□□ -0.42
PRPF39-203ENST00000477626 INSL5Q9Y5Q6 135 aa12.44□□□□□ -0.42
PRPF39-203ENST00000477626 FOXO6A8MYZ6 492 aa12.44□□□□□ -0.42
PRPF39-203ENST00000477626 CNPP09543 421 aaKnown RBP12.44□□□□□ -0.42
PRPF39-203ENST00000477626 TPI1P60174 286 aa12.44□□□□□ -0.42
PRPF39-203ENST00000477626 RPL10AP62906 217 aaKnown RBP12.44□□□□□ -0.42
PRPF39-203ENST00000477626 CCDC38Q502W7 563 aa12.44□□□□□ -0.42
PRPF39-203ENST00000477626 DENND2CQ68D51 928 aa12.44□□□□□ -0.42
PRPF39-203ENST00000477626 RSAD2Q8WXG1 361 aa12.44□□□□□ -0.42
PRPF39-203ENST00000477626 ISL2Q96A47 359 aa12.44□□□□□ -0.42
PRPF39-203ENST00000477626 LRRC39Q96DD0 335 aa12.44□□□□□ -0.42
PRPF39-203ENST00000477626 TBC1D31Q96DN5 1066 aa12.44□□□□□ -0.42
PRPF39-203ENST00000477626 ALG14Q96F25 216 aa12.44□□□□□ -0.42
PRPF39-203ENST00000477626 TGM5O43548 720 aa12.44□□□□□ -0.42
PRPF39-203ENST00000477626 AP2A1O95782 977 aa12.44□□□□□ -0.42
PRPF39-203ENST00000477626 RHOQP17081 205 aa12.44□□□□□ -0.42
PRPF39-203ENST00000477626 ARL13BQ3SXY8 428 aa12.44□□□□□ -0.42
PRPF39-203ENST00000477626 TEX44Q53QW1 395 aa12.44□□□□□ -0.42
PRPF39-203ENST00000477626 SLC22A17Q8WUG5 538 aa12.44□□□□□ -0.42
PRPF39-203ENST00000477626 ZNF317Q96PQ6 595 aaPredicted RBP12.44□□□□□ -0.42
PRPF39-203ENST00000477626 TRIM56Q9BRZ2 755 aaKnown RBP12.44□□□□□ -0.42
PRPF39-203ENST00000477626 PLXNA2O75051 1894 aa12.43□□□□□ -0.42
PRPF39-203ENST00000477626 TCRBV9S1A1TA0A576 114 aa12.43□□□□□ -0.42
PRPF39-203ENST00000477626 C2orf78A6NCI8 922 aa12.43□□□□□ -0.42
PRPF39-203ENST00000477626 E7EVH7 732 aa12.43□□□□□ -0.42
PRPF39-203ENST00000477626 ZBTB24O43167 697 aaPredicted RBP12.43□□□□□ -0.42
PRPF39-203ENST00000477626 CREB3O43889 395 aa12.43□□□□□ -0.42
PRPF39-203ENST00000477626 STC2O76061 302 aa12.43□□□□□ -0.42
PRPF39-203ENST00000477626 HOXD9P28356 352 aaPredicted RBP12.43□□□□□ -0.42
PRPF39-203ENST00000477626 FDFT1P37268 417 aa12.43□□□□□ -0.42
PRPF39-203ENST00000477626 MAGEA12P43365 314 aa12.43□□□□□ -0.42
PRPF39-203ENST00000477626 LONRF1Q17RB8 773 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms