RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 ACSL4O60488 711 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 LATS1O95835 1130 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 ADH1BP00325 375 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 F13A1P00488 732 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 ZSCAN22P10073 491 aaPredicted RBP6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 EPB41P11171 864 aaKnown RBP6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 PFKFB1P16118 471 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 ZNF18P17022 549 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 NNMTP40261 264 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 STK19P49842 368 aaPredicted RBP6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 ADPRHP54922 357 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 NXPH1P58417 271 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 DAOAP59103 153 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 YWHAEP62258 255 aaKnown RBP6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 PPP2CBP62714 309 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 RPS24P62847 133 aaKnown RBP6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 PPP2CAP67775 309 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 DNM1Q05193 864 aaKnown RBP6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 SHBQ15464 509 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 HNRNPA1L2Q32P51 320 aaKnown RBP6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 ACCSLQ4AC99 568 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 PITRM1Q5JRX3 1037 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 ARHGAP40Q5TG30 622 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 PIK3R6Q5UE93 754 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 PM20D1Q6GTS8 502 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 FBXL19Q6PCT2 694 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 PRPF39Q86UA1 669 aaKnown RBP6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 CHSY1Q86X52 802 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 LGI2Q8N0V4 545 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 STK40Q8N2I9 435 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 ZNF843Q8N446 348 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 OXR1Q8N573 874 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 AADATQ8N5Z0 425 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 FGF11Q92914 225 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 RPL10LQ96L21 214 aaKnown RBP6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 PRICKLE1Q96MT3 831 aaPredicted RBP6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 ORAI3Q9BRQ5 295 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 UBXN6Q9BZV1 441 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 MIS12Q9H081 205 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 CFAP45Q9UL16 551 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 FZD4Q9ULV1 537 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 TRAF3IP3Q9Y228 551 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 FLNBO75369 2602 aaKnown RBP6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 ARID1BQ8NFD5 2236 aaPredicted RBP6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 TENM4Q6N022 2769 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 J3QKU1 62 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 IRAK2O43187 625 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 MAGEC1O60732 1142 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 LUC7L3O95232 432 aaKnown RBP6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 APOEP02649 317 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 LTFP02788 710 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 MPOP05164 745 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 SRPRAP08240 638 aaKnown RBP6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 SETSIPP0DME0 302 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 VDRP11473 427 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 VAV1P15498 845 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 GOT1P17174 413 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 CKMT2P17540 419 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 C5AR1P21730 350 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 GTF2H1P32780 548 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 SYKP43405 635 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 CCR5P51681 352 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 PCBP4P57723 403 aaKnown RBP6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 TMPRSS3P57727 454 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 ECT2LQ008S8 904 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 INSM1Q01101 510 aaPredicted RBP6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 KCNH2Q12809 1159 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 CUL2Q13617 745 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 KCNJ12Q14500 433 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 STAT4Q14765 748 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 RTP5Q14D33 572 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 TBC1D25Q3MII6 688 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 FAM133BQ5BKY9 247 aaKnown RBP6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 FSCBQ5H9T9 825 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 MPP7Q5T2T1 576 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 C9orf64Q5T6V5 341 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 RAP1GAP2Q684P5 730 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 NADSYN1Q6IA69 706 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 NAPEPLDQ6IQ20 393 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 BHLHA9Q7RTU4 235 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 KIAA0907Q7Z7F0 614 aaPredicted RBP6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 SPACA3Q8IXA5 215 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 APCDD1Q8J025 514 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 PIP4P2Q8N4L2 257 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 ZNF248Q8NDW4 579 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 SNIP1Q8TAD8 396 aaKnown RBP6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 FIBINQ8TAL6 211 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 CLEC4CQ8WTT0 213 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 KLK6Q92876 244 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 TTC17Q96AE7 1141 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 FAM149B1Q96BN6 582 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 MYO19Q96H55 970 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 MRGPRX3Q96LB0 322 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 SERPINB11Q96P15 392 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 CALN1Q9BXU9 219 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 NUCKS1Q9H1E3 243 aaKnown RBP6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 OSBPL2Q9H1P3 480 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 CPNE5Q9HCH3 593 aa6.91□□□□□ -1.3
RTFDC1-206ENST00000477485 CNGB3Q9NQW8 809 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms