RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 SCUBE3Q8IX30 993 aa16.18■□□□□ 0.18
CPSF3-203ENST00000475482 NETO1Q8TDF5 533 aa16.18■□□□□ 0.18
CPSF3-203ENST00000475482 C18orf8Q96DM3 657 aa16.18■□□□□ 0.18
CPSF3-203ENST00000475482 ARHGEF26Q96DR7 871 aa16.18■□□□□ 0.18
CPSF3-203ENST00000475482 LAMA1P25391 3075 aa16.17■□□□□ 0.18
CPSF3-203ENST00000475482 TCRBV21S2A2A0A5A6 115 aa16.17■□□□□ 0.18
CPSF3-203ENST00000475482 BCLAF3A2AJT9 711 aaKnown RBP16.17■□□□□ 0.18
CPSF3-203ENST00000475482 SLC30A4O14863 429 aa16.17■□□□□ 0.18
CPSF3-203ENST00000475482 NPC1O15118 1278 aa16.17■□□□□ 0.18
CPSF3-203ENST00000475482 PAPSS1O43252 624 aaPredicted RBP16.17■□□□□ 0.18
CPSF3-203ENST00000475482 SART1O43290 800 aaKnown RBP16.17■□□□□ 0.18
CPSF3-203ENST00000475482 CYBBP04839 570 aa16.17■□□□□ 0.18
CPSF3-203ENST00000475482 HOXB2P14652 356 aa16.17■□□□□ 0.18
CPSF3-203ENST00000475482 PRLRP16471 622 aa16.17■□□□□ 0.18
CPSF3-203ENST00000475482 RRM1P23921 792 aa16.17■□□□□ 0.18
CPSF3-203ENST00000475482 HOXD9P28356 352 aaPredicted RBP16.17■□□□□ 0.18
CPSF3-203ENST00000475482 MPLP40238 635 aa16.17■□□□□ 0.18
CPSF3-203ENST00000475482 LIMK1P53667 647 aa16.17■□□□□ 0.18
CPSF3-203ENST00000475482 NNTQ13423 1086 aa16.17■□□□□ 0.18
CPSF3-203ENST00000475482 EIF4EBP2Q13542 120 aaPredicted RBP16.17■□□□□ 0.18
CPSF3-203ENST00000475482 MPPE1Q53F39 396 aa16.17■□□□□ 0.18
CPSF3-203ENST00000475482 PLEKHA7Q6IQ23 1121 aa16.17■□□□□ 0.18
CPSF3-203ENST00000475482 KIAA1211LQ6NV74 962 aa16.17■□□□□ 0.18
CPSF3-203ENST00000475482 DNAJC24Q6P3W2 148 aa16.17■□□□□ 0.18
CPSF3-203ENST00000475482 DGLUCYQ7Z3D6 616 aa16.17■□□□□ 0.18
CPSF3-203ENST00000475482 PEX26Q7Z412 305 aa16.17■□□□□ 0.18
CPSF3-203ENST00000475482 DNAAF5Q86Y56 855 aa16.17■□□□□ 0.18
CPSF3-203ENST00000475482 ZDHHC17Q8IUH5 632 aa16.17■□□□□ 0.18
CPSF3-203ENST00000475482 CHPFQ8IZ52 775 aa16.17■□□□□ 0.18
CPSF3-203ENST00000475482 WDTC1Q8N5D0 677 aa16.17■□□□□ 0.18
CPSF3-203ENST00000475482 HMGB4Q8WW32 186 aa16.17■□□□□ 0.18
CPSF3-203ENST00000475482 SLC39A13Q96H72 371 aa16.17■□□□□ 0.18
CPSF3-203ENST00000475482 RTKNQ9BST9 563 aa16.17■□□□□ 0.18
CPSF3-203ENST00000475482 OSGEPQ9NPF4 335 aa16.17■□□□□ 0.18
CPSF3-203ENST00000475482 THAP10Q9P2Z0 257 aaPredicted RBP16.17■□□□□ 0.18
CPSF3-203ENST00000475482 MBD1Q9UIS9 605 aaPredicted RBP16.17■□□□□ 0.18
CPSF3-203ENST00000475482 AMFRQ9UKV5 643 aa16.17■□□□□ 0.18
CPSF3-203ENST00000475482 INVSQ9Y283 1065 aa16.17■□□□□ 0.18
CPSF3-203ENST00000475482 GRID2IPA4D2P6 1211 aa16.16■□□□□ 0.18
CPSF3-203ENST00000475482 MYO1FO00160 1098 aa16.16■□□□□ 0.18
CPSF3-203ENST00000475482 GDF9O60383 454 aa16.16■□□□□ 0.18
CPSF3-203ENST00000475482 C7P10643 843 aa16.16■□□□□ 0.18
CPSF3-203ENST00000475482 TCP1P17987 556 aaKnown RBP16.16■□□□□ 0.18
CPSF3-203ENST00000475482 GABRB2P47870 512 aa16.16■□□□□ 0.18
CPSF3-203ENST00000475482 PTP4A2Q12974 167 aa16.16■□□□□ 0.18
CPSF3-203ENST00000475482 PDCLQ13371 301 aa16.16■□□□□ 0.18
CPSF3-203ENST00000475482 EIF4HQ15056 248 aaKnown RBP16.16■□□□□ 0.18
CPSF3-203ENST00000475482 FAM133BQ5BKY9 247 aaKnown RBP16.16■□□□□ 0.18
CPSF3-203ENST00000475482 SPDYCQ5MJ68 293 aa16.16■□□□□ 0.18
CPSF3-203ENST00000475482 MPP7Q5T2T1 576 aa16.16■□□□□ 0.18
CPSF3-203ENST00000475482 PAPD7Q5XG87 772 aaKnown RBP16.16■□□□□ 0.18
CPSF3-203ENST00000475482 NUGGCQ68CJ6 796 aa16.16■□□□□ 0.18
CPSF3-203ENST00000475482 TMEM215Q68D42 235 aa16.16■□□□□ 0.18
CPSF3-203ENST00000475482 KIAA0907Q7Z7F0 614 aaPredicted RBP16.16■□□□□ 0.18
CPSF3-203ENST00000475482 SLFN11Q7Z7L1 901 aa16.16■□□□□ 0.18
CPSF3-203ENST00000475482 UNC45BQ8IWX7 931 aa16.16■□□□□ 0.18
CPSF3-203ENST00000475482 FRMD1Q8N878 549 aa16.16■□□□□ 0.18
CPSF3-203ENST00000475482 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.16■□□□□ 0.18
CPSF3-203ENST00000475482 LRRC57Q8N9N7 239 aa16.16■□□□□ 0.18
CPSF3-203ENST00000475482 C3orf20Q8ND61 904 aa16.16■□□□□ 0.18
CPSF3-203ENST00000475482 DQX1Q8TE96 717 aaKnown RBP16.16■□□□□ 0.18
CPSF3-203ENST00000475482 RLN3Q8WXF3 142 aa16.16■□□□□ 0.18
CPSF3-203ENST00000475482 FCRL2Q96LA5 508 aaPredicted RBP16.16■□□□□ 0.18
CPSF3-203ENST00000475482 VPS45Q9NRW7 570 aa16.16■□□□□ 0.18
CPSF3-203ENST00000475482 CDV3Q9UKY7 258 aaKnown RBP16.16■□□□□ 0.18
CPSF3-203ENST00000475482 SAR1BQ9Y6B6 198 aa16.16■□□□□ 0.18
CPSF3-203ENST00000475482 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.15■□□□□ 0.18
CPSF3-203ENST00000475482 MIF4GDA9UHW6 222 aaKnown RBP16.15■□□□□ 0.18
CPSF3-203ENST00000475482 WASH3PC4AMC7 463 aa16.15■□□□□ 0.18
CPSF3-203ENST00000475482 E5RJQ4 531 aa16.15■□□□□ 0.18
CPSF3-203ENST00000475482 BUB1BO60566 1050 aaPredicted RBP16.15■□□□□ 0.18
CPSF3-203ENST00000475482 IGLV3-25P01717 112 aa16.15■□□□□ 0.18
CPSF3-203ENST00000475482 DESP17661 470 aa16.15■□□□□ 0.18
CPSF3-203ENST00000475482 GBP1P32455 592 aa16.15■□□□□ 0.18
CPSF3-203ENST00000475482 WASP42768 502 aa16.15■□□□□ 0.18
CPSF3-203ENST00000475482 SLC1A1P43005 524 aa16.15■□□□□ 0.18
CPSF3-203ENST00000475482 MAMLD1Q13495 774 aa16.15■□□□□ 0.18
CPSF3-203ENST00000475482 BYSLQ13895 437 aaKnown RBP16.15■□□□□ 0.18
CPSF3-203ENST00000475482 RPS6KA1Q15418 735 aa16.15■□□□□ 0.18
CPSF3-203ENST00000475482 SF3A2Q15428 464 aaKnown RBP16.15■□□□□ 0.18
CPSF3-203ENST00000475482 PTPN20Q4JDL3 420 aa16.15■□□□□ 0.18
CPSF3-203ENST00000475482 MEI1Q5TIA1 1274 aa16.15■□□□□ 0.18
CPSF3-203ENST00000475482 PIK3R6Q5UE93 754 aa16.15■□□□□ 0.18
CPSF3-203ENST00000475482 SYPL2Q5VXT5 272 aa16.15■□□□□ 0.18
CPSF3-203ENST00000475482 SDE2Q6IQ49 451 aa16.15■□□□□ 0.18
CPSF3-203ENST00000475482 DCUN1D2Q6PH85 259 aa16.15■□□□□ 0.18
CPSF3-203ENST00000475482 ANKS1BQ7Z6G8 1248 aa16.15■□□□□ 0.18
CPSF3-203ENST00000475482 DDI1Q8WTU0 396 aa16.15■□□□□ 0.18
CPSF3-203ENST00000475482 GOLGA1Q92805 767 aa16.15■□□□□ 0.18
CPSF3-203ENST00000475482 TMA16Q96EY4 203 aaKnown RBP16.15■□□□□ 0.18
CPSF3-203ENST00000475482 SERPINB11Q96P15 392 aa16.15■□□□□ 0.18
CPSF3-203ENST00000475482 SELENOOQ9BVL4 669 aa16.15■□□□□ 0.18
CPSF3-203ENST00000475482 ST7Q9NRC1 585 aa16.15■□□□□ 0.18
CPSF3-203ENST00000475482 RXFP3Q9NSD7 469 aa16.15■□□□□ 0.18
CPSF3-203ENST00000475482 ELOVL2Q9NXB9 296 aa16.15■□□□□ 0.18
CPSF3-203ENST00000475482 CACNA2D2Q9NY47 1150 aa16.15■□□□□ 0.18
CPSF3-203ENST00000475482 ANAPC7Q9UJX3 599 aa16.15■□□□□ 0.18
CPSF3-203ENST00000475482 NAALADL1Q9UQQ1 740 aa16.15■□□□□ 0.18
CPSF3-203ENST00000475482 TLR6Q9Y2C9 796 aa16.15■□□□□ 0.18
CPSF3-203ENST00000475482 HYOU1Q9Y4L1 999 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms