RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 PCDH19Q8TAB3 1148 aa8.58□□□□□ -1.04
CNN3-205ENST00000474409 ACTRT1Q8TDG2 376 aa8.58□□□□□ -1.04
CNN3-205ENST00000474409 P3H4Q92791 437 aa8.58□□□□□ -1.04
CNN3-205ENST00000474409 FGF14Q92915 247 aa8.58□□□□□ -1.04
CNN3-205ENST00000474409 IGSF8Q969P0 613 aa8.58□□□□□ -1.04
CNN3-205ENST00000474409 TMA16Q96EY4 203 aaKnown RBP8.58□□□□□ -1.04
CNN3-205ENST00000474409 ZFYVE19Q96K21 471 aa8.58□□□□□ -1.04
CNN3-205ENST00000474409 HERPUD2Q9BSE4 406 aa8.58□□□□□ -1.04
CNN3-205ENST00000474409 BBS2Q9BXC9 721 aa8.58□□□□□ -1.04
CNN3-205ENST00000474409 PRDM16Q9HAZ2 1276 aa8.58□□□□□ -1.04
CNN3-205ENST00000474409 SPHK2Q9NRA0 654 aa8.58□□□□□ -1.04
CNN3-205ENST00000474409 TMEM248Q9NWD8 314 aa8.58□□□□□ -1.04
CNN3-205ENST00000474409 DONSONQ9NYP3 566 aa8.58□□□□□ -1.04
CNN3-205ENST00000474409 RNF14Q9UBS8 474 aa8.58□□□□□ -1.04
CNN3-205ENST00000474409 EFR3BQ9Y2G0 817 aa8.58□□□□□ -1.04
CNN3-205ENST00000474409 HEY1Q9Y5J3 304 aa8.58□□□□□ -1.04
CNN3-205ENST00000474409 XIRP2A4UGR9 3374 aa8.58□□□□□ -1.04
CNN3-205ENST00000474409 SCN8AQ9UQD0 1980 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 TCRBV7S2A1N4TA0A589 114 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 H0Y626 953 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 APOC4-APOC2K7ER74 178 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 KRIT1O00522 736 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 PPP1R12AO14974 1030 aaPredicted RBP8.57□□□□□ -1.04
CNN3-205ENST00000474409 MCF2LO15068 1137 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 CLDN11O75508 207 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 CNTN5O94779 1100 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 LUC7L3O95232 432 aaKnown RBP8.57□□□□□ -1.04
CNN3-205ENST00000474409 APOC2P02655 101 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 CYP17A1P05093 508 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 ADH5P11766 374 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 IL4RP24394 825 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 HOXD9P28356 352 aaPredicted RBP8.57□□□□□ -1.04
CNN3-205ENST00000474409 OR1E1P30953 314 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 GDI1P31150 447 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 MAPKAPK2P49137 400 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 OTUD4Q01804 1114 aaKnown RBP8.57□□□□□ -1.04
CNN3-205ENST00000474409 ADCY2Q08462 1091 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 FCHO2Q0JRZ9 810 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 KLF1Q13351 362 aaPredicted RBP8.57□□□□□ -1.04
CNN3-205ENST00000474409 AAK1Q2M2I8 961 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 EML3Q32P44 896 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 C5orf22Q49AR2 442 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 ALFQ53S48 1182 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 C6orf118Q5T5N4 469 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 MFN1Q8IWA4 741 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 PLCD3Q8N3E9 789 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 CPA6Q8N4T0 437 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 ATPAF2Q8N5M1 289 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 PQLC3Q8N755 202 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 PLD5Q8N7P1 536 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 ZNF557Q8N988 423 aaPredicted RBP8.57□□□□□ -1.04
CNN3-205ENST00000474409 MYEOVQ96EZ4 313 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 ASIC4Q96FT7 647 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 CELF6Q96J87 481 aaKnown RBP8.57□□□□□ -1.04
CNN3-205ENST00000474409 LRRC3BQ96PB8 259 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 TRMT61BQ9BVS5 477 aaKnown RBP8.57□□□□□ -1.04
CNN3-205ENST00000474409 AP1M1Q9BXS5 423 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 EBF3Q9H4W6 596 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 BRD9Q9H8M2 597 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 RRAGDQ9NQL2 400 aaPredicted RBP8.57□□□□□ -1.04
CNN3-205ENST00000474409 PRDM6Q9NQX0 595 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 ETNK2Q9NVF9 386 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 PLK2Q9NYY3 685 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 TTC7AQ9ULT0 858 aaPredicted RBP8.57□□□□□ -1.04
CNN3-205ENST00000474409 MFHAS1Q9Y4C4 1052 aa8.57□□□□□ -1.04
CNN3-205ENST00000474409 TP53BP1Q12888 1972 aaPredicted RBP8.57□□□□□ -1.04
CNN3-205ENST00000474409 PRUNE2Q8WUY3 3088 aa8.56□□□□□ -1.04
CNN3-205ENST00000474409 ZNF106Q9H2Y7 1883 aaKnown RBP8.56□□□□□ -1.04
CNN3-205ENST00000474409 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.56□□□□□ -1.04
CNN3-205ENST00000474409 DRGXA6NNA5 263 aa8.56□□□□□ -1.04
CNN3-205ENST00000474409 WASH4PA8MWX3 477 aa8.56□□□□□ -1.04
CNN3-205ENST00000474409 ANHXE9PGG2 379 aa8.56□□□□□ -1.04
CNN3-205ENST00000474409 CCDC188H7C350 402 aa8.56□□□□□ -1.04
CNN3-205ENST00000474409 DFFAO00273 331 aa8.56□□□□□ -1.04
CNN3-205ENST00000474409 CHADO15335 359 aa8.56□□□□□ -1.04
CNN3-205ENST00000474409 RAMP2O60895 175 aa8.56□□□□□ -1.04
CNN3-205ENST00000474409 MAP3K6O95382 1288 aa8.56□□□□□ -1.04
CNN3-205ENST00000474409 TYRP14679 529 aa8.56□□□□□ -1.04
CNN3-205ENST00000474409 ARSAP15289 507 aa8.56□□□□□ -1.04
CNN3-205ENST00000474409 PECAM1P16284 738 aaPredicted RBP8.56□□□□□ -1.04
CNN3-205ENST00000474409 MX2P20592 715 aa8.56□□□□□ -1.04
CNN3-205ENST00000474409 GBE1Q04446 702 aa8.56□□□□□ -1.04
CNN3-205ENST00000474409 GAD2Q05329 585 aa8.56□□□□□ -1.04
CNN3-205ENST00000474409 C2orf54Q08AI8 447 aa8.56□□□□□ -1.04
CNN3-205ENST00000474409 NR1H3Q13133 447 aa8.56□□□□□ -1.04
CNN3-205ENST00000474409 ZNF177Q13360 481 aaPredicted RBP8.56□□□□□ -1.04
CNN3-205ENST00000474409 PAFAH1B3Q15102 231 aaKnown RBP8.56□□□□□ -1.04
CNN3-205ENST00000474409 NOMO1Q15155 1222 aa8.56□□□□□ -1.04
CNN3-205ENST00000474409 DHCR24Q15392 516 aa8.56□□□□□ -1.04
CNN3-205ENST00000474409 LY6G5CQ5SRR4 150 aa8.56□□□□□ -1.04
CNN3-205ENST00000474409 MPP7Q5T2T1 576 aa8.56□□□□□ -1.04
CNN3-205ENST00000474409 FYB2Q5VWT5 728 aa8.56□□□□□ -1.04
CNN3-205ENST00000474409 NPNTQ6UXI9 565 aa8.56□□□□□ -1.04
CNN3-205ENST00000474409 BZW1Q7L1Q6 419 aaKnown RBP8.56□□□□□ -1.04
CNN3-205ENST00000474409 NLRP14Q86W24 1093 aa8.56□□□□□ -1.04
CNN3-205ENST00000474409 TMEM25Q86YD3 366 aa8.56□□□□□ -1.04
CNN3-205ENST00000474409 CREG2Q8IUH2 290 aa8.56□□□□□ -1.04
CNN3-205ENST00000474409 ZDHHC14Q8IZN3 488 aa8.56□□□□□ -1.04
CNN3-205ENST00000474409 CCDC33Q8N5R6 958 aa8.56□□□□□ -1.04
CNN3-205ENST00000474409 LZTR1Q8N653 840 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms