RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 PCYOX1Q9UHG3 505 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 DNPEPQ9ULA0 475 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 DRG1Q9Y295 367 aaKnown RBP10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 R3HDM2Q9Y2K5 976 aaKnown RBP10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 MYO9BQ13459 2157 aa10.56□□□□□ -0.72
PRPF38A-202ENST00000474048 GOLGA6L7A0A1B0GV03 622 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 GOLGA6CA6NDK9 693 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 GOLGA6BA6NDN3 693 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 DCLK1O15075 740 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 TTI1O43156 1089 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 RAD51CO43502 376 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 TBL1XO60907 577 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 MAP3K6O95382 1288 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 KRT14P02533 472 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 GOLGA6DP0CG33 693 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 IL4RP24394 825 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 HOXC13P31276 330 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 ADCY8P40145 1251 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 TNNT3P45378 269 aaPredicted RBP10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 KCNJ1P48048 391 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 LMAN1P49257 510 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 NDST2P52849 883 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 GUCY2DQ02846 1103 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 GBE1Q04446 702 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 KCNC3Q14003 757 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 POLD3Q15054 466 aaPredicted RBP10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 ELF2Q15723 593 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 PARP15Q460N3 678 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 MANEALQ5VSG8 457 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 ARHGEF18Q6ZSZ5 1173 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 CHST9Q7L1S5 443 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 MFN1Q8IWA4 741 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 CPXM2Q8N436 756 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 CARNMT1Q8N4J0 409 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 ITFG1Q8TB96 612 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 SMARCD2Q92925 531 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 USP13Q92995 863 aaPredicted RBP10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 CELF6Q96J87 481 aaKnown RBP10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 ZFRQ96KR1 1074 aaKnown RBP10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 QKIQ96PU8 341 aaKnown RBP eCLIP10.55□□□□□ -0.723e-7■■■■■ 29.8
PRPF38A-202ENST00000474048 HERPUD2Q9BSE4 406 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 TMEM121Q9BTD3 319 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 MAGEB5Q9BZ81 275 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 TRIM31Q9BZY9 425 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 SMG9Q9H0W8 520 aaKnown RBP10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 TTYH1Q9H313 450 aaPredicted RBP10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 ZFP14Q9HCL3 533 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 FAM114A2Q9NRY5 505 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 GOLGA6AQ9NYA3 693 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 DTLQ9NZJ0 730 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 SAE1Q9UBE0 346 aaPredicted RBP10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 CD207Q9UJ71 328 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 CDH7Q9ULB5 785 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 ZFP37Q9Y6Q3 630 aaPredicted RBP10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 MYO7AQ13402 2215 aa10.55□□□□□ -0.72
PRPF38A-202ENST00000474048 IGLV3-10A0A075B6K4 115 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 WASH4PA8MWX3 477 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 E7EVH7 732 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 TRDMT1O14717 391 aaKnown RBP10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 SCAMP3O14828 347 aaKnown RBP10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 NFATC1O95644 943 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 ADH1CP00326 375 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 FOSL2P15408 326 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 POU3F3P20264 500 aaPredicted RBP10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 SLC6A4P31645 630 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 VPS41P49754 854 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 YBEYP58557 167 aaPredicted RBP10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 SLC7A5Q01650 507 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 ADCY2Q08462 1091 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 USP4Q13107 963 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 NR1H3Q13133 447 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 CUL1Q13616 776 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 CBX2Q14781 532 aaPredicted RBP10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 SIX1Q15475 284 aaPredicted RBP10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 FAM133BQ5BKY9 247 aaKnown RBP10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 IL31Q6EBC2 164 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 ITPRIPL1Q6GPH6 555 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 NADSYN1Q6IA69 706 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 TPGS1Q6ZTW0 290 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 MTSS1LQ765P7 747 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 OTOP3Q7RTS5 596 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 ANKS1BQ7Z6G8 1248 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 PCGF5Q86SE9 256 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 C14orf80Q86SX3 495 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 SETD3Q86TU7 594 aaPredicted RBP10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 CIR1Q86X95 450 aaPredicted RBP10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 BBS7Q8IWZ6 715 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 NPAS3Q8IXF0 933 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 CCDC13Q8IYE1 715 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 CFAP52Q8N1V2 620 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 ALLCQ8N6M5 410 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 SLC35B2Q8TB61 432 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 BPIFB1Q8TDL5 484 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 HTR3CQ8WXA8 447 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 IFT81Q8WYA0 676 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 FGF13Q92913 245 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 SNF8Q96H20 258 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 PRMT1Q99873 361 aaKnown RBP10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 KLC2Q9H0B6 622 aa10.54□□□□□ -0.72
PRPF38A-202ENST00000474048 MAGEH1Q9H213 219 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms