RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 MAK16Q9BXY0 300 aaKnown RBP15.25■□□□□ 0.03
LMNA-213ENST00000473598 DCLK3Q9C098 648 aa15.25■□□□□ 0.03
LMNA-213ENST00000473598 R3HDM2Q9Y2K5 976 aaKnown RBP15.25■□□□□ 0.03
LMNA-213ENST00000473598 I6L893 689 aaPredicted RBP15.24■□□□□ 0.03
LMNA-213ENST00000473598 MSI1O43347 362 aaKnown RBP15.24■□□□□ 0.03
LMNA-213ENST00000473598 COILP38432 576 aaPredicted RBP15.24■□□□□ 0.03
LMNA-213ENST00000473598 PTGIRP43119 386 aa15.24■□□□□ 0.03
LMNA-213ENST00000473598 CCNG1P51959 295 aa15.24■□□□□ 0.03
LMNA-213ENST00000473598 CCNG2Q16589 344 aa15.24■□□□□ 0.03
LMNA-213ENST00000473598 KCTD19Q17RG1 926 aaPredicted RBP15.24■□□□□ 0.03
LMNA-213ENST00000473598 BRMS1LQ5PSV4 323 aa15.24■□□□□ 0.03
LMNA-213ENST00000473598 ARMC3Q5W041 872 aa15.24■□□□□ 0.03
LMNA-213ENST00000473598 TTC27Q6P3X3 843 aa15.24■□□□□ 0.03
LMNA-213ENST00000473598 CCDC137Q6PK04 289 aaKnown RBP15.24■□□□□ 0.03
LMNA-213ENST00000473598 ZNF276Q8N554 614 aa15.24■□□□□ 0.03
LMNA-213ENST00000473598 MIPOL1Q8TD10 442 aa15.24■□□□□ 0.03
LMNA-213ENST00000473598 RNF34Q969K3 372 aa15.24■□□□□ 0.03
LMNA-213ENST00000473598 PSMG2Q969U7 264 aa15.24■□□□□ 0.03
LMNA-213ENST00000473598 SEC16BQ96JE7 1060 aa15.24■□□□□ 0.03
LMNA-213ENST00000473598 RUNDC3BQ96NL0 473 aa15.24■□□□□ 0.03
LMNA-213ENST00000473598 TKTL2Q9H0I9 626 aa15.24■□□□□ 0.03
LMNA-213ENST00000473598 ARHGEF38Q9NXL2 777 aa15.24■□□□□ 0.03
LMNA-213ENST00000473598 DRG2P55039 364 aaKnown RBP15.24■□□□□ 0.03
LMNA-213ENST00000473598 DYNLT1P63172 113 aa15.24■□□□□ 0.03
LMNA-213ENST00000473598 DYNC1I2Q13409 638 aaKnown RBP15.24■□□□□ 0.03
LMNA-213ENST00000473598 TFDP2Q14188 446 aa15.24■□□□□ 0.03
LMNA-213ENST00000473598 SPRED3Q2MJR0 410 aa15.24■□□□□ 0.03
LMNA-213ENST00000473598 CCDC149Q6ZUS6 474 aa15.24■□□□□ 0.03
LMNA-213ENST00000473598 DNAJB7Q7Z6W7 309 aaPredicted RBP15.24■□□□□ 0.03
LMNA-213ENST00000473598 ITIH5Q86UX2 942 aa15.24■□□□□ 0.03
LMNA-213ENST00000473598 JAMLQ86YT9 394 aa15.24■□□□□ 0.03
LMNA-213ENST00000473598 ATG4AQ8WYN0 398 aa15.24■□□□□ 0.03
LMNA-213ENST00000473598 LRRC45Q96CN5 670 aa15.24■□□□□ 0.03
LMNA-213ENST00000473598 ZNF512Q96ME7 567 aaPredicted RBP15.24■□□□□ 0.03
LMNA-213ENST00000473598 RCOR3Q9P2K3 495 aaPredicted RBP15.24■□□□□ 0.03
LMNA-213ENST00000473598 TLR6Q9Y2C9 796 aa15.24■□□□□ 0.03
LMNA-213ENST00000473598 SMIM24O75264 130 aa15.23■□□□□ 0.03
LMNA-213ENST00000473598 GLUD1P00367 558 aa15.23■□□□□ 0.03
LMNA-213ENST00000473598 VIMP08670 466 aaKnown RBP15.23■□□□□ 0.03
LMNA-213ENST00000473598 CCR1P32246 355 aa15.23■□□□□ 0.03
LMNA-213ENST00000473598 ARL4AP40617 200 aa15.23■□□□□ 0.03
LMNA-213ENST00000473598 CLCN4P51793 760 aa15.23■□□□□ 0.03
LMNA-213ENST00000473598 EFEMP1Q12805 493 aa15.23■□□□□ 0.03
LMNA-213ENST00000473598 SFSWAPQ12872 951 aaKnown RBP15.23■□□□□ 0.03
LMNA-213ENST00000473598 PPP2R5DQ14738 602 aa15.23■□□□□ 0.03
LMNA-213ENST00000473598 C10orf120Q5SQS8 335 aa15.23■□□□□ 0.03
LMNA-213ENST00000473598 HIBCHQ6NVY1 386 aaPredicted RBP15.23■□□□□ 0.03
LMNA-213ENST00000473598 TTC13Q8NBP0 860 aa15.23■□□□□ 0.03
LMNA-213ENST00000473598 KREMEN2Q8NCW0 462 aa15.23■□□□□ 0.03
LMNA-213ENST00000473598 PCDH19Q8TAB3 1148 aa15.23■□□□□ 0.03
LMNA-213ENST00000473598 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.23■□□□□ 0.03
LMNA-213ENST00000473598 CDK5RAP1Q96SZ6 601 aaKnown RBP15.23■□□□□ 0.03
LMNA-213ENST00000473598 DPH5Q9H2P9 285 aa15.23■□□□□ 0.03
LMNA-213ENST00000473598 CCSER2Q9H7U1 834 aa15.23■□□□□ 0.03
LMNA-213ENST00000473598 UXTQ9UBK9 157 aaPredicted RBP15.23■□□□□ 0.03
LMNA-213ENST00000473598 ZNF232Q9UNY5 417 aa15.23■□□□□ 0.03
LMNA-213ENST00000473598 ASB3Q9Y575 518 aa15.23■□□□□ 0.03
LMNA-213ENST00000473598 MTCH2Q9Y6C9 303 aa15.23■□□□□ 0.03
LMNA-213ENST00000473598 ZNF840PA6NDX5 716 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 APOC4-APOC2K7ER74 178 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 TLR5O60602 858 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 TBX18O95935 607 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 APOC2P02655 101 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 C8AP07357 584 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 GOT1P17174 413 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 CCND1P24385 295 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 KCNJ1P48048 391 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 PPP3CCP48454 512 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 SLC9A4Q6AI14 798 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 PDE12Q6L8Q7 609 aaKnown RBP15.22■□□□□ 0.03
LMNA-213ENST00000473598 CCDC105Q8IYK2 499 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 PQLC3Q8N755 202 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 CCDC63Q8NA47 563 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 SLC39A13Q96H72 371 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 CSPG4P5Q96PW8 444 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 GAS2L1Q99501 681 aaPredicted RBP15.22■□□□□ 0.03
LMNA-213ENST00000473598 FAM118BQ9BPY3 351 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 TRPM5Q9NZQ8 1165 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 RASAL2Q9UJF2 1139 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 LIASO43766 372 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 C1RP00736 705 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 KRT14P02533 472 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 LRG1P02750 347 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 HSD17B3P37058 310 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 TBX4P57082 545 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 SEMA3BQ13214 749 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 PPP1R7Q15435 360 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 DRICH1Q6PGQ1 229 aaPredicted RBP15.22■□□□□ 0.03
LMNA-213ENST00000473598 ADGRD2Q7Z7M1 963 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 SLCO2A1Q92959 643 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 HAUS1Q96CS2 278 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 MRPL38Q96DV4 380 aaKnown RBP15.22■□□□□ 0.03
LMNA-213ENST00000473598 HAPLN3Q96S86 360 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 FRMD8P1Q9BZ68 369 aaPredicted RBP15.22■□□□□ 0.03
LMNA-213ENST00000473598 TRIM31Q9BZY9 425 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 ZDHHC18Q9NUE0 388 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 MARCH2Q9P0N8 246 aa15.22■□□□□ 0.03
LMNA-213ENST00000473598 UNC80Q8N2C7 3258 aa15.21■□□□□ 0.03
LMNA-213ENST00000473598 KCNU1A8MYU2 1149 aa15.21■□□□□ 0.03
LMNA-213ENST00000473598 FAM72CH0Y354 149 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms