RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 UBA1P22314 1058 aaKnown RBP6.26□□□□□ -1.41
HERC4-209ENST00000473533 GLDCP23378 1020 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 TCF7P36402 384 aaPredicted RBP6.26□□□□□ -1.41
HERC4-209ENST00000473533 IGBP1P78318 339 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 PRKG1Q13976 671 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 TAF5Q15542 800 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 LRRC36Q1X8D7 754 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 SEZ6Q53EL9 994 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 RALGPS1Q5JS13 557 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 INTS6LQ5JSJ4 861 aaKnown RBP6.26□□□□□ -1.41
HERC4-209ENST00000473533 LIPMQ5VYY2 423 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 ARHGAP17Q68EM7 881 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 C16orf46Q6P387 395 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 TRMT10BQ6PF06 316 aaKnown RBP6.26□□□□□ -1.41
HERC4-209ENST00000473533 OLFML1Q6UWY5 402 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 ZNF534Q76KX8 674 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 SATL1Q86VE3 508 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 HPS6Q86YV9 775 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 TRIML2Q8N7C3 387 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 C1orf127Q8N9H9 656 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 TNIP2Q8NFZ5 429 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 GCNAQ96QF7 691 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 SORT1Q99523 831 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 MRPL1Q9BYD6 325 aaKnown RBP6.26□□□□□ -1.41
HERC4-209ENST00000473533 UPF3AQ9H1J1 476 aaKnown RBP6.26□□□□□ -1.41
HERC4-209ENST00000473533 NMRAL1Q9HBL8 299 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 LRRC4Q9HBW1 653 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 PNPOQ9NVS9 261 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 TRHDEQ9UKU6 1024 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 EMCNQ9ULC0 261 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 STAP1Q9ULZ2 295 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 WNT10BO00744 389 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 MAP3K13O43283 966 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 ITM2AO43736 263 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 LYPLA1O75608 230 aaPredicted RBP6.26□□□□□ -1.41
HERC4-209ENST00000473533 DGKIO75912 1065 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 METTL18O95568 372 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 STAG3L1P0CL83 205 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 RAP1GAPP47736 663 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 NDST1P52848 882 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 BCAT1P54687 386 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 SULT2A1Q06520 285 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 C15orf59Q2T9L4 293 aaPredicted RBP6.26□□□□□ -1.41
HERC4-209ENST00000473533 ANO4Q32M45 955 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 ZNF484Q5JVG2 852 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 TCHHL1Q5QJ38 904 aaPredicted RBP6.26□□□□□ -1.41
HERC4-209ENST00000473533 ZYG11AQ6WRX3 759 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 CATSPERGQ6ZRH7 1159 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 FRMD7Q6ZUT3 714 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 CYP4V2Q6ZWL3 525 aaPredicted RBP6.26□□□□□ -1.41
HERC4-209ENST00000473533 LINC00523Q86TU6 105 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 RSPH3Q86UC2 560 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 ZNF410Q86VK4 478 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 IFNLR1Q8IU57 520 aaPredicted RBP6.26□□□□□ -1.41
HERC4-209ENST00000473533 ERI1Q8IV48 349 aaKnown RBP6.26□□□□□ -1.41
HERC4-209ENST00000473533 NUP93Q8N1F7 819 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 PACRGLQ8N7B6 248 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 ZC3H15Q8WU90 426 aaKnown RBP6.26□□□□□ -1.41
HERC4-209ENST00000473533 CENPIQ92674 756 aaPredicted RBP6.26□□□□□ -1.41
HERC4-209ENST00000473533 NMD3Q96D46 503 aaKnown RBP6.26□□□□□ -1.41
HERC4-209ENST00000473533 HSFY1Q96LI6 401 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 PLEKHA5Q9HAU0 1116 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 VPS45Q9NRW7 570 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.26□□□□□ -1.413e-6■□□□□ 9.1
HERC4-209ENST00000473533 BTBD7Q9P203 1132 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 SUCOQ9UBS9 1254 aaKnown RBP6.26□□□□□ -1.41
HERC4-209ENST00000473533 PTBP2Q9UKA9 531 aaKnown RBP6.26□□□□□ -1.41
HERC4-209ENST00000473533 RPS6KL1Q9Y6S9 549 aa6.26□□□□□ -1.41
HERC4-209ENST00000473533 HMX2A2RU54 273 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 XPOTO43592 962 aaKnown RBP6.25□□□□□ -1.41
HERC4-209ENST00000473533 DNAJA2O60884 412 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 DDHD2O94830 711 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 CRTAMO95727 393 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 CXCL8P10145 99 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 IL4RP24394 825 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 ACADVLP49748 655 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 HPCAP84074 193 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 BST2Q10589 180 aaKnown RBP6.25□□□□□ -1.41
HERC4-209ENST00000473533 MTM1Q13496 603 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 MAP7D1Q3KQU3 841 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 DCAF4L1Q3SXM0 396 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 SPATS1Q496A3 300 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 KRT80Q6KB66 452 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 SNX32Q86XE0 403 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 RNF168Q8IYW5 571 aaPredicted RBP6.25□□□□□ -1.41
HERC4-209ENST00000473533 DSELQ8IZU8 1212 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 CXorf38Q8TB03 319 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 UBA3Q8TBC4 463 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 PGBD4Q96DM1 585 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 CSPG4P5Q96PW8 444 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 EML4Q9HC35 981 aaKnown RBP6.25□□□□□ -1.41
HERC4-209ENST00000473533 PNPLA3Q9NST1 481 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 RSL24D1Q9UHA3 163 aaKnown RBP6.25□□□□□ -1.41
HERC4-209ENST00000473533 SIX4Q9UIU6 781 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 ITGB1BP2Q9UKP3 347 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 RIPK3Q9Y572 518 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 PARP14Q460N5 1801 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 A0A096LPK6 155 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 LOC100653049A0A140TA62 436 aa6.25□□□□□ -1.41
HERC4-209ENST00000473533 CAPN8A6NHC0 703 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms