RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 EPHB2P29323 1055 aa16.93■□□□□ 0.3
HOXB3-205ENST00000470495 PLIN5Q00G26 463 aa16.93■□□□□ 0.3
HOXB3-205ENST00000470495 LRRC6Q86X45 466 aa16.93■□□□□ 0.3
HOXB3-205ENST00000470495 CYP4X1Q8N118 509 aa16.93■□□□□ 0.3
HOXB3-205ENST00000470495 LRRC52Q8N7C0 313 aa16.93■□□□□ 0.3
HOXB3-205ENST00000470495 FNIP1Q8TF40 1166 aa16.93■□□□□ 0.3
HOXB3-205ENST00000470495 L3MBTL3Q96JM7 780 aaPredicted RBP16.93■□□□□ 0.3
HOXB3-205ENST00000470495 TBCBQ99426 244 aa16.93■□□□□ 0.3
HOXB3-205ENST00000470495 KCNK1O00180 336 aa16.92■□□□□ 0.3
HOXB3-205ENST00000470495 PTPN1P18031 435 aaKnown RBP16.92■□□□□ 0.3
HOXB3-205ENST00000470495 ZNF252P-AS1Q0IIN9 211 aa16.92■□□□□ 0.3
HOXB3-205ENST00000470495 BTBD8Q5XKL5 378 aa16.92■□□□□ 0.3
HOXB3-205ENST00000470495 TAF2Q6P1X5 1199 aa16.92■□□□□ 0.3
HOXB3-205ENST00000470495 ST13P5Q8NFI4 369 aaPredicted RBP16.92■□□□□ 0.3
HOXB3-205ENST00000470495 NKD2Q969F2 451 aaPredicted RBP16.92■□□□□ 0.3
HOXB3-205ENST00000470495 TRIM55Q9BYV6 548 aa16.92■□□□□ 0.3
HOXB3-205ENST00000470495 TRPV5Q9NQA5 729 aa16.92■□□□□ 0.3
HOXB3-205ENST00000470495 ST3GAL5Q9UNP4 418 aa16.92■□□□□ 0.3
HOXB3-205ENST00000470495 PHIPQ8WWQ0 1821 aa16.92■□□□□ 0.3
HOXB3-205ENST00000470495 TRIM64A6NGJ6 449 aa16.92■□□□□ 0.3
HOXB3-205ENST00000470495 TRIM64BA6NI03 449 aa16.92■□□□□ 0.3
HOXB3-205ENST00000470495 LIN7AO14910 233 aaPredicted RBP16.92■□□□□ 0.3
HOXB3-205ENST00000470495 POU5F1BQ06416 359 aa16.92■□□□□ 0.3
HOXB3-205ENST00000470495 TMEM259Q4ZIN3 620 aa16.92■□□□□ 0.3
HOXB3-205ENST00000470495 ISLR2Q6UXK2 745 aa16.92■□□□□ 0.3
HOXB3-205ENST00000470495 ANKS1BQ7Z6G8 1248 aa16.92■□□□□ 0.3
HOXB3-205ENST00000470495 SMYD1Q8NB12 490 aa16.92■□□□□ 0.3
HOXB3-205ENST00000470495 MTG1Q9BT17 334 aaPredicted RBP16.92■□□□□ 0.3
HOXB3-205ENST00000470495 ULBP1Q9BZM6 244 aa16.92■□□□□ 0.3
HOXB3-205ENST00000470495 ZMAT5Q9UDW3 170 aaKnown RBP16.92■□□□□ 0.3
HOXB3-205ENST00000470495 GMEB1Q9Y692 573 aa16.92■□□□□ 0.3
HOXB3-205ENST00000470495 C2CD4BA6NLJ0 364 aa16.92■□□□□ 0.3
HOXB3-205ENST00000470495 PAPSS1O43252 624 aaPredicted RBP16.92■□□□□ 0.3
HOXB3-205ENST00000470495 FYNP06241 537 aa16.92■□□□□ 0.3
HOXB3-205ENST00000470495 PROZP22891 400 aa16.92■□□□□ 0.3
HOXB3-205ENST00000470495 FKBP1BP68106 108 aa16.92■□□□□ 0.3
HOXB3-205ENST00000470495 ADAM17P78536 824 aa16.92■□□□□ 0.3
HOXB3-205ENST00000470495 GAD2Q05329 585 aa16.92■□□□□ 0.3
HOXB3-205ENST00000470495 KLF1Q13351 362 aaPredicted RBP16.92■□□□□ 0.3
HOXB3-205ENST00000470495 FAM187BQ17R55 369 aa16.92■□□□□ 0.3
HOXB3-205ENST00000470495 CPT1BQ92523 772 aa16.92■□□□□ 0.3
HOXB3-205ENST00000470495 SCYL1Q96KG9 808 aa16.92■□□□□ 0.3
HOXB3-205ENST00000470495 MARCOQ9UEW3 520 aaPredicted RBP16.92■□□□□ 0.3
HOXB3-205ENST00000470495 SSC5DA1L4H1 1573 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 USP17L7P0C7H9 530 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 GOT1P17174 413 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 FCGRTP55899 365 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 ARHGEF6Q15052 776 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 SPATA2LQ8IUW3 424 aaPredicted RBP16.91■□□□□ 0.3
HOXB3-205ENST00000470495 ERP27Q96DN0 273 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 APOL2Q9BQE5 337 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 Q9H521 79 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 PHTF1Q9UMS5 762 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 CNTN6Q9UQ52 1028 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 A0A1W2PPM1 405 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 RPA3P35244 121 aaPredicted RBP16.91■□□□□ 0.3
HOXB3-205ENST00000470495 GARSP41250 739 aaKnown RBP16.91■□□□□ 0.3
HOXB3-205ENST00000470495 GRB14Q14449 540 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 CA9Q16790 459 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 SOWAHAQ2M3V2 549 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 FNBP1LQ5T0N5 605 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 SPOUT1Q5T280 376 aaKnown RBP16.91■□□□□ 0.3
HOXB3-205ENST00000470495 ZNF618Q5T7W0 954 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 SLC2A7Q6PXP3 512 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 RETREG1Q9H6L5 497 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 TRNAU1APQ9NX07 287 aaKnown RBP16.91■□□□□ 0.3
HOXB3-205ENST00000470495 TGM2P21980 687 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 SOX11P35716 441 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 CRYBB1P53674 252 aaPredicted RBP16.91■□□□□ 0.3
HOXB3-205ENST00000470495 PDK1Q15118 436 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 RAB6CQ53S08 254 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 GOLM1Q8NBJ4 401 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 HIPK4Q8NE63 616 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 MCRS1Q96EZ8 462 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 MAGEB18Q96M61 343 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 FAM192AQ9GZU8 254 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 RAB6CQ9H0N0 254 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 NMRK2Q9NPI5 230 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 WDR70Q9NW82 654 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 BFARQ9NZS9 450 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 GPR182O15218 404 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 TUBA4AP68366 448 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 GBE1Q04446 702 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 PPP2R2DQ66LE6 453 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 RASSF3Q86WH2 238 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 SLCO2A1Q92959 643 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 CITED4Q96RK1 184 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 NFKBIZQ9BYH8 718 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 WDCPQ9H6R7 721 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 SLC24A2Q9UI40 661 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 NR2E3Q9Y5X4 410 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 COMMD3-BMI1R4GMX3 469 aa16.91■□□□□ 0.3
HOXB3-205ENST00000470495 GON4LQ3T8J9 2241 aa16.9■□□□□ 0.3
HOXB3-205ENST00000470495 ZBTB48P10074 688 aaPredicted RBP16.9■□□□□ 0.3
HOXB3-205ENST00000470495 OR1G1P47890 313 aa16.9■□□□□ 0.3
HOXB3-205ENST00000470495 CRADDP78560 199 aa16.9■□□□□ 0.3
HOXB3-205ENST00000470495 MED21Q13503 144 aa16.9■□□□□ 0.3
HOXB3-205ENST00000470495 KPNB1Q14974 876 aaKnown RBP16.9■□□□□ 0.3
HOXB3-205ENST00000470495 RNASEH2BQ5TBB1 312 aaKnown RBP16.9■□□□□ 0.3
HOXB3-205ENST00000470495 PPP4R1Q8TF05 950 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms