RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-204ENST00000463829 ACP5P13686 325 aa4.72□□□□□ -1.65
USP9X-204ENST00000463829 TNNT1P13805 278 aa4.72□□□□□ -1.65
USP9X-204ENST00000463829 RPS6KB1P23443 525 aa4.72□□□□□ -1.65
USP9X-204ENST00000463829 PNPLA4P41247 253 aa4.72□□□□□ -1.65
USP9X-204ENST00000463829 ADPRHP54922 357 aa4.72□□□□□ -1.65
USP9X-204ENST00000463829 SLC12A1Q13621 1099 aa4.72□□□□□ -1.65
USP9X-204ENST00000463829 ALKBH1Q13686 389 aaKnown RBP4.72□□□□□ -1.65
USP9X-204ENST00000463829 ZNF474Q6S9Z5 364 aaPredicted RBP4.72□□□□□ -1.65
USP9X-204ENST00000463829 EXD3Q8N9H8 876 aa4.72□□□□□ -1.65
USP9X-204ENST00000463829 FAM47BQ8NA70 645 aa4.72□□□□□ -1.65
USP9X-204ENST00000463829 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.72□□□□□ -1.65
USP9X-204ENST00000463829 BCAS4Q8TDM0 211 aa4.72□□□□□ -1.65
USP9X-204ENST00000463829 HERVK_113Q902F9 699 aa4.72□□□□□ -1.65
USP9X-204ENST00000463829 ATP2A3Q93084 1043 aa4.72□□□□□ -1.65
USP9X-204ENST00000463829 ZNF347Q96SE7 839 aa4.72□□□□□ -1.65
USP9X-204ENST00000463829 ARHGAP39Q9C0H5 1083 aa4.72□□□□□ -1.65
USP9X-204ENST00000463829 PI4KBQ9UBF8 816 aa4.72□□□□□ -1.65
USP9X-204ENST00000463829 IPO11Q9UI26 975 aaKnown RBP4.72□□□□□ -1.65
USP9X-204ENST00000463829 DNAJC16Q9Y2G8 782 aa4.72□□□□□ -1.65
USP9X-204ENST00000463829 MCIDASD6RGH6 385 aa4.71□□□□□ -1.66
USP9X-204ENST00000463829 NCAM2O15394 837 aa4.71□□□□□ -1.66
USP9X-204ENST00000463829 CNPP09543 421 aaKnown RBP4.71□□□□□ -1.66
USP9X-204ENST00000463829 ST6GAL1P15907 406 aa4.71□□□□□ -1.66
USP9X-204ENST00000463829 HOXB9P17482 250 aaPredicted RBP4.71□□□□□ -1.66
USP9X-204ENST00000463829 TFEBP19484 476 aa4.71□□□□□ -1.66
USP9X-204ENST00000463829 PRPH2P23942 346 aa4.71□□□□□ -1.66
USP9X-204ENST00000463829 MPGP29372 298 aa4.71□□□□□ -1.66
USP9X-204ENST00000463829 HOXA7P31268 230 aaPredicted RBP4.71□□□□□ -1.66
USP9X-204ENST00000463829 OAZ1P54368 228 aa4.71□□□□□ -1.66
USP9X-204ENST00000463829 SLC12A2P55011 1212 aa4.71□□□□□ -1.66
USP9X-204ENST00000463829 B4GALNT1Q00973 533 aa4.71□□□□□ -1.66
USP9X-204ENST00000463829 GHRHRQ02643 423 aa4.71□□□□□ -1.66
USP9X-204ENST00000463829 UBE3AQ05086 875 aa4.71□□□□□ -1.66
USP9X-204ENST00000463829 STIM1Q13586 685 aa4.71□□□□□ -1.66
USP9X-204ENST00000463829 THOC5Q13769 683 aaKnown RBP4.71□□□□□ -1.66
USP9X-204ENST00000463829 EARS2Q5JPH6 523 aaKnown RBP4.71□□□□□ -1.66
USP9X-204ENST00000463829 LIPMQ5VYY2 423 aa4.71□□□□□ -1.66
USP9X-204ENST00000463829 UBE2Q1Q7Z7E8 422 aa4.71□□□□□ -1.66
USP9X-204ENST00000463829 LRRTM4Q86VH4 590 aa4.71□□□□□ -1.66
USP9X-204ENST00000463829 TMEM200AQ86VY9 491 aa4.71□□□□□ -1.66
USP9X-204ENST00000463829 CPOQ8IVL8 374 aa4.71□□□□□ -1.66
USP9X-204ENST00000463829 ANKRD44Q8N8A2 993 aa4.71□□□□□ -1.66
USP9X-204ENST00000463829 OR52N4Q8NGI2 321 aa4.71□□□□□ -1.66
USP9X-204ENST00000463829 ZFPM2Q8WW38 1151 aa4.71□□□□□ -1.66
USP9X-204ENST00000463829 KCNJ9Q92806 393 aa4.71□□□□□ -1.66
USP9X-204ENST00000463829 RBM17Q96I25 401 aaKnown RBP4.71□□□□□ -1.66
USP9X-204ENST00000463829 TBATAQ96M53 351 aa4.71□□□□□ -1.66
USP9X-204ENST00000463829 PPP1R10Q96QC0 940 aaKnown RBP4.71□□□□□ -1.66
USP9X-204ENST00000463829 TWNKQ96RR1 684 aa4.71□□□□□ -1.66
USP9X-204ENST00000463829 TRIM31Q9BZY9 425 aa4.71□□□□□ -1.66
USP9X-204ENST00000463829 CLPBQ9H078 707 aa4.71□□□□□ -1.66
USP9X-204ENST00000463829 TXNRD2Q9NNW7 524 aa4.71□□□□□ -1.66
USP9X-204ENST00000463829 MLXIPLQ9NP71 852 aa4.71□□□□□ -1.66
USP9X-204ENST00000463829 PDGFCQ9NRA1 345 aa4.71□□□□□ -1.66
USP9X-204ENST00000463829 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.71□□□□□ -1.66
USP9X-204ENST00000463829 SLC25A13Q9UJS0 675 aa4.71□□□□□ -1.66
USP9X-204ENST00000463829 CYP2D7A0A087X1C5 515 aa4.7□□□□□ -1.66
USP9X-204ENST00000463829 SLC22A23A1A5C7 686 aa4.7□□□□□ -1.66
USP9X-204ENST00000463829 RRN3P2A6NIE6 340 aa4.7□□□□□ -1.66
USP9X-204ENST00000463829 TSPAN3O60637 253 aa4.7□□□□□ -1.66
USP9X-204ENST00000463829 PYGLP06737 847 aa4.7□□□□□ -1.66
USP9X-204ENST00000463829 CSF1P09603 554 aa4.7□□□□□ -1.66
USP9X-204ENST00000463829 PKMP14618 531 aaKnown RBP4.7□□□□□ -1.66
USP9X-204ENST00000463829 EPHB2P29323 1055 aa4.7□□□□□ -1.66
USP9X-204ENST00000463829 ALFQ53S48 1182 aa4.7□□□□□ -1.66
USP9X-204ENST00000463829 RUNDC3AQ59EK9 446 aa4.7□□□□□ -1.66
USP9X-204ENST00000463829 CBWD5Q5RIA9 395 aa4.7□□□□□ -1.66
USP9X-204ENST00000463829 C10orf76Q5T2E6 689 aa4.7□□□□□ -1.66
USP9X-204ENST00000463829 MAP3K21Q5TCX8 1036 aa4.7□□□□□ -1.66
USP9X-204ENST00000463829 MDGA2Q7Z553 956 aa4.7□□□□□ -1.66
USP9X-204ENST00000463829 PAQR4Q8N4S7 273 aaPredicted RBP4.7□□□□□ -1.66
USP9X-204ENST00000463829 ARL14EPQ8N8R7 260 aaPredicted RBP4.7□□□□□ -1.66
USP9X-204ENST00000463829 LINS1Q8NG48 757 aa4.7□□□□□ -1.66
USP9X-204ENST00000463829 NTN5Q8WTR8 489 aaPredicted RBP4.7□□□□□ -1.66
USP9X-204ENST00000463829 MAELQ96JY0 434 aaKnown RBP4.7□□□□□ -1.66
USP9X-204ENST00000463829 SH2D3AQ9BRG2 576 aa4.7□□□□□ -1.66
USP9X-204ENST00000463829 HERC2P3Q9BVR0 1158 aa4.7□□□□□ -1.66
USP9X-204ENST00000463829 QTRT1Q9BXR0 403 aaKnown RBP4.7□□□□□ -1.66
USP9X-204ENST00000463829 HDHD5Q9BXW7 423 aa4.7□□□□□ -1.66
USP9X-204ENST00000463829 SLC22A11Q9NSA0 550 aa4.7□□□□□ -1.66
USP9X-204ENST00000463829 THAP1Q9NVV9 213 aa4.7□□□□□ -1.66
USP9X-204ENST00000463829 KLHL13Q9P2N7 655 aa4.7□□□□□ -1.66
USP9X-204ENST00000463829 PGAP2Q9UHJ9 254 aa4.7□□□□□ -1.66
USP9X-204ENST00000463829 DTX4Q9Y2E6 619 aa4.7□□□□□ -1.66
USP9X-204ENST00000463829 PKP3Q9Y446 797 aa4.7□□□□□ -1.66
USP9X-204ENST00000463829 SMIM35A0A1B0GVV1 85 aa4.69□□□□□ -1.66
USP9X-204ENST00000463829 VWA3AA6NCI4 1184 aa4.69□□□□□ -1.66
USP9X-204ENST00000463829 NPIPB13A6NJU9 1138 aa4.69□□□□□ -1.66
USP9X-204ENST00000463829 NPIPB5A8MRT5 1133 aa4.69□□□□□ -1.66
USP9X-204ENST00000463829 NPIPB4C9JG80 1138 aa4.69□□□□□ -1.66
USP9X-204ENST00000463829 CCNT1O60563 726 aaKnown RBP4.69□□□□□ -1.66
USP9X-204ENST00000463829 CELA2AP08217 269 aa4.69□□□□□ -1.66
USP9X-204ENST00000463829 CPA1P15085 419 aa4.69□□□□□ -1.66
USP9X-204ENST00000463829 ATP5F1P24539 256 aaPredicted RBP4.69□□□□□ -1.66
USP9X-204ENST00000463829 CNTFP26441 200 aa4.69□□□□□ -1.66
USP9X-204ENST00000463829 GSTM2P28161 218 aa4.69□□□□□ -1.66
USP9X-204ENST00000463829 RPS6KA3P51812 740 aa4.69□□□□□ -1.66
USP9X-204ENST00000463829 TLE2Q04725 743 aa4.69□□□□□ -1.66
USP9X-204ENST00000463829 CHRNDQ07001 517 aa4.69□□□□□ -1.66
USP9X-204ENST00000463829 SRSF4Q08170 494 aaKnown RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms