RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 PRDM16Q9HAZ2 1276 aa10.05□□□□□ -0.8
C9orf78-203ENST00000461539 HPS4Q9NQG7 708 aa10.05□□□□□ -0.8
C9orf78-203ENST00000461539 TMEM248Q9NWD8 314 aa10.05□□□□□ -0.8
C9orf78-203ENST00000461539 DONSONQ9NYP3 566 aa10.05□□□□□ -0.8
C9orf78-203ENST00000461539 SMARCAL1Q9NZC9 954 aa10.05□□□□□ -0.8
C9orf78-203ENST00000461539 EFR3BQ9Y2G0 817 aa10.05□□□□□ -0.8
C9orf78-203ENST00000461539 MFHAS1Q9Y4C4 1052 aa10.05□□□□□ -0.8
C9orf78-203ENST00000461539 MYO9BQ13459 2157 aa10.05□□□□□ -0.8
C9orf78-203ENST00000461539 TCRBV7S2A1N4TA0A589 114 aa10.04□□□□□ -0.8
C9orf78-203ENST00000461539 WASH4PA8MWX3 477 aa10.04□□□□□ -0.8
C9orf78-203ENST00000461539 LOC730098B7Z3J9 87 aa10.04□□□□□ -0.8
C9orf78-203ENST00000461539 PGRMC1O00264 195 aaKnown RBP10.04□□□□□ -0.8
C9orf78-203ENST00000461539 HOXC11O43248 304 aaPredicted RBP10.04□□□□□ -0.8
C9orf78-203ENST00000461539 RAMP2O60895 175 aa10.04□□□□□ -0.8
C9orf78-203ENST00000461539 LUC7L3O95232 432 aaKnown RBP10.04□□□□□ -0.8
C9orf78-203ENST00000461539 PENKP01210 267 aaPredicted RBP10.04□□□□□ -0.8
C9orf78-203ENST00000461539 RHOCP08134 193 aa10.04□□□□□ -0.8
C9orf78-203ENST00000461539 TYRP14679 529 aa10.04□□□□□ -0.8
C9orf78-203ENST00000461539 HOXD9P28356 352 aaPredicted RBP10.04□□□□□ -0.8
C9orf78-203ENST00000461539 SERPINB6P35237 376 aa10.04□□□□□ -0.8
C9orf78-203ENST00000461539 MAPKAPK2P49137 400 aa10.04□□□□□ -0.8
C9orf78-203ENST00000461539 GBE1Q04446 702 aa10.04□□□□□ -0.8
C9orf78-203ENST00000461539 ADCY2Q08462 1091 aa10.04□□□□□ -0.8
C9orf78-203ENST00000461539 RUNX3Q13761 415 aa10.04□□□□□ -0.8
C9orf78-203ENST00000461539 ARTNQ5T4W7 220 aa10.04□□□□□ -0.8
C9orf78-203ENST00000461539 C6orf118Q5T5N4 469 aa10.04□□□□□ -0.8
C9orf78-203ENST00000461539 NCBP2-AS2Q69YL0 99 aa10.04□□□□□ -0.8
C9orf78-203ENST00000461539 SLC9A4Q6AI14 798 aa10.04□□□□□ -0.8
C9orf78-203ENST00000461539 NPNTQ6UXI9 565 aa10.04□□□□□ -0.8
C9orf78-203ENST00000461539 ZNF354CQ86Y25 554 aa10.04□□□□□ -0.8
C9orf78-203ENST00000461539 RASGEF1CQ8N431 466 aa10.04□□□□□ -0.8
C9orf78-203ENST00000461539 LZTR1Q8N653 840 aa10.04□□□□□ -0.8
C9orf78-203ENST00000461539 PLD5Q8N7P1 536 aa10.04□□□□□ -0.8
C9orf78-203ENST00000461539 NAT16Q8N8M0 369 aa10.04□□□□□ -0.8
C9orf78-203ENST00000461539 NETO2Q8NC67 525 aa10.04□□□□□ -0.8
C9orf78-203ENST00000461539 CSGALNACT1Q8TDX6 532 aa10.04□□□□□ -0.8
C9orf78-203ENST00000461539 MAIP1Q8WWC4 291 aa10.04□□□□□ -0.8
C9orf78-203ENST00000461539 ATXN2LQ8WWM7 1075 aaKnown RBP10.04□□□□□ -0.8
C9orf78-203ENST00000461539 P2RY11Q96G91 374 aa10.04□□□□□ -0.8
C9orf78-203ENST00000461539 CELF6Q96J87 481 aaKnown RBP10.04□□□□□ -0.8
C9orf78-203ENST00000461539 XPO6Q96QU8 1125 aaKnown RBP10.04□□□□□ -0.8
C9orf78-203ENST00000461539 NAP1L3Q99457 506 aaPredicted RBP10.04□□□□□ -0.8
C9orf78-203ENST00000461539 NDFIP2Q9NV92 336 aa10.04□□□□□ -0.8
C9orf78-203ENST00000461539 GTSE1Q9NYZ3 720 aa10.04□□□□□ -0.8
C9orf78-203ENST00000461539 MARK1Q9P0L2 795 aa10.04□□□□□ -0.8
C9orf78-203ENST00000461539 PRKAG3Q9UGI9 489 aa10.04□□□□□ -0.8
C9orf78-203ENST00000461539 CDC23Q9UJX2 597 aa10.04□□□□□ -0.8
C9orf78-203ENST00000461539 HEY1Q9Y5J3 304 aa10.04□□□□□ -0.8
C9orf78-203ENST00000461539 OTOL1A6NHN0 477 aaPredicted RBP10.03□□□□□ -0.8
C9orf78-203ENST00000461539 DFFAO00273 331 aa10.03□□□□□ -0.8
C9orf78-203ENST00000461539 MFSD11O43934 449 aa10.03□□□□□ -0.8
C9orf78-203ENST00000461539 MAP3K6O95382 1288 aa10.03□□□□□ -0.8
C9orf78-203ENST00000461539 PECAM1P16284 738 aaPredicted RBP10.03□□□□□ -0.8
C9orf78-203ENST00000461539 TGM2P21980 687 aa10.03□□□□□ -0.8
C9orf78-203ENST00000461539 OXCT1P55809 520 aa10.03□□□□□ -0.8
C9orf78-203ENST00000461539 ZP2Q05996 745 aa10.03□□□□□ -0.8
C9orf78-203ENST00000461539 TUBB2AQ13885 445 aa10.03□□□□□ -0.8
C9orf78-203ENST00000461539 PAFAH1B3Q15102 231 aaKnown RBP10.03□□□□□ -0.8
C9orf78-203ENST00000461539 ITPRIPL2Q3MIP1 535 aa10.03□□□□□ -0.8
C9orf78-203ENST00000461539 SETD3Q86TU7 594 aaPredicted RBP10.03□□□□□ -0.8
C9orf78-203ENST00000461539 CREG2Q8IUH2 290 aa10.03□□□□□ -0.8
C9orf78-203ENST00000461539 CCDC33Q8N5R6 958 aa10.03□□□□□ -0.8
C9orf78-203ENST00000461539 NPWQ8N729 165 aa10.03□□□□□ -0.8
C9orf78-203ENST00000461539 ZNF557Q8N988 423 aaPredicted RBP10.03□□□□□ -0.8
C9orf78-203ENST00000461539 TTC13Q8NBP0 860 aa10.03□□□□□ -0.8
C9orf78-203ENST00000461539 ACTRT1Q8TDG2 376 aa10.03□□□□□ -0.8
C9orf78-203ENST00000461539 P3H4Q92791 437 aa10.03□□□□□ -0.8
C9orf78-203ENST00000461539 ASB2Q96Q27 587 aa10.03□□□□□ -0.8
C9orf78-203ENST00000461539 FAM118BQ9BPY3 351 aa10.03□□□□□ -0.8
C9orf78-203ENST00000461539 SPON2Q9BUD6 331 aa10.03□□□□□ -0.8
C9orf78-203ENST00000461539 TUBB2BQ9BVA1 445 aa10.03□□□□□ -0.8
C9orf78-203ENST00000461539 AP1M1Q9BXS5 423 aa10.03□□□□□ -0.8
C9orf78-203ENST00000461539 MUC3BQ9H195 1237 aa10.03□□□□□ -0.8
C9orf78-203ENST00000461539 RETREG1Q9H6L5 497 aa10.03□□□□□ -0.8
C9orf78-203ENST00000461539 DNAJC17Q9NVM6 304 aaKnown RBP10.03□□□□□ -0.8
C9orf78-203ENST00000461539 SAE1Q9UBE0 346 aaPredicted RBP10.03□□□□□ -0.8
C9orf78-203ENST00000461539 RNF14Q9UBS8 474 aa10.03□□□□□ -0.8
C9orf78-203ENST00000461539 TTC7AQ9ULT0 858 aaPredicted RBP10.03□□□□□ -0.8
C9orf78-203ENST00000461539 CLEC4EQ9ULY5 219 aa10.03□□□□□ -0.8
C9orf78-203ENST00000461539 CDH23Q9H251 3354 aa10.03□□□□□ -0.8
C9orf78-203ENST00000461539 PATJQ8NI35 1801 aa10.03□□□□□ -0.8
C9orf78-203ENST00000461539 GOLGA6L10A0A0M3HER8 536 aa10.02□□□□□ -0.81
C9orf78-203ENST00000461539 ILVBLA1L0T0 632 aa10.02□□□□□ -0.81
C9orf78-203ENST00000461539 ARHGAP42A6NI28 874 aa10.02□□□□□ -0.81
C9orf78-203ENST00000461539 RASA4BC9J798 803 aa10.02□□□□□ -0.81
C9orf78-203ENST00000461539 APOC4-APOC2K7ER74 178 aa10.02□□□□□ -0.81
C9orf78-203ENST00000461539 PDE2AO00408 941 aaPredicted RBP10.02□□□□□ -0.81
C9orf78-203ENST00000461539 KRIT1O00522 736 aa10.02□□□□□ -0.81
C9orf78-203ENST00000461539 RASA4O43374 803 aa10.02□□□□□ -0.81
C9orf78-203ENST00000461539 APOC2P02655 101 aa10.02□□□□□ -0.81
C9orf78-203ENST00000461539 MX2P20592 715 aa10.02□□□□□ -0.81
C9orf78-203ENST00000461539 CSKP41240 450 aa10.02□□□□□ -0.81
C9orf78-203ENST00000461539 NR2C2P49116 596 aa10.02□□□□□ -0.81
C9orf78-203ENST00000461539 NUMBP49757 651 aa10.02□□□□□ -0.81
C9orf78-203ENST00000461539 NDST2P52849 883 aa10.02□□□□□ -0.81
C9orf78-203ENST00000461539 OTUD4Q01804 1114 aaKnown RBP10.02□□□□□ -0.81
C9orf78-203ENST00000461539 PFKPQ01813 784 aa10.02□□□□□ -0.81
C9orf78-203ENST00000461539 GNA12Q03113 381 aa10.02□□□□□ -0.81
C9orf78-203ENST00000461539 CKAP4Q07065 602 aaKnown RBP10.02□□□□□ -0.81
C9orf78-203ENST00000461539 LMAN2Q12907 356 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms