RNA–Protein interactions for RNA: ENST00000457888.2

UBDP1-202, Transcript of ubiquitin D pseudogene 1, humanhuman

BASIC

Gene UBDP1, Length 382 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBDP1-202ENST00000457888 SAGE1Q9NXZ1 904 aa4.39□□□□□ -1.71
UBDP1-202ENST00000457888 TMOD4Q9NZQ9 345 aa4.39□□□□□ -1.71
UBDP1-202ENST00000457888 PCDHA6Q9UN73 950 aa4.39□□□□□ -1.71
UBDP1-202ENST00000457888 PCDHA1Q9Y5I3 950 aa4.39□□□□□ -1.71
UBDP1-202ENST00000457888 MGAMO43451 1857 aa4.39□□□□□ -1.71
UBDP1-202ENST00000457888 A0A1B0GTW7 788 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 CCDC69A6NI79 296 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 NT5C1B-RDH14C9J2C7 533 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 ZBTB5O15062 677 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 PJA2O43164 708 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 SNAI1O95863 264 aaPredicted RBP4.38□□□□□ -1.71
UBDP1-202ENST00000457888 ICAM1P05362 532 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 PGK2P07205 417 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 SETSIPP0DME0 302 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 TYRP14679 529 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 ALOX15P16050 662 aaPredicted RBP4.38□□□□□ -1.71
UBDP1-202ENST00000457888 DDCP20711 480 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 MALP21145 153 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 PSMC4P43686 418 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 GCLCP48506 637 aaPredicted RBP4.38□□□□□ -1.71
UBDP1-202ENST00000457888 FLT3LGP49771 235 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 CASP5P51878 434 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 STAT2P52630 851 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 RCAN1P53805 252 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 CLRN1P58418 232 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 SP3Q02447 781 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 SREBF2Q12772 1141 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 BAATQ14032 418 aaPredicted RBP4.38□□□□□ -1.71
UBDP1-202ENST00000457888 FGL2Q14314 439 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 CCL14Q16627 93 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 FAM110CQ1W6H9 321 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 GRAMD1BQ3KR37 738 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 LONRF3Q496Y0 759 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 C4orf46Q504U0 113 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 INO80DQ53TQ3 878 aaPredicted RBP4.38□□□□□ -1.71
UBDP1-202ENST00000457888 CCDC174Q6PII3 467 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 ZNF572Q7Z3I7 529 aaPredicted RBP4.38□□□□□ -1.71
UBDP1-202ENST00000457888 C11orf96Q7Z7L8 435 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 FAM160B2Q86V87 743 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 PPP1R3BQ86XI6 285 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 FAM133AQ8N9E0 248 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 TRPV1Q8NER1 839 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 GPRC5AQ8NFJ5 357 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 CASKIN2Q8WXE0 1202 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 CRYGNQ8WXF5 182 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 PIBF1Q8WXW3 757 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 DPF1Q92782 380 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 SLC35A4Q96G79 324 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 APIPQ96GX9 242 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 TAAR1Q96RJ0 339 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 PAGR1Q9BTK6 254 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 C1orf43Q9BWL3 253 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 REXO4Q9GZR2 422 aaKnown RBP4.38□□□□□ -1.71
UBDP1-202ENST00000457888 TMEM140Q9NV12 185 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 KCTD5Q9NXV2 234 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 CALCOCO1Q9P1Z2 691 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 CPNE7Q9UBL6 633 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 CDC23Q9UJX2 597 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 ACTL7AQ9Y615 435 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 LAMA3Q16787 3333 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 CEP290O15078 2479 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 SPTBN5Q9NRC6 3674 aaKnown RBP4.38□□□□□ -1.71
UBDP1-202ENST00000457888 MYH6P13533 1939 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 MCM3APO60318 1980 aa4.38□□□□□ -1.71
UBDP1-202ENST00000457888 A0A0C4DFX4 3053 aa4.37□□□□□ -1.71
UBDP1-202ENST00000457888 RASA4BC9J798 803 aa4.37□□□□□ -1.71
UBDP1-202ENST00000457888 MYO1FO00160 1098 aa4.37□□□□□ -1.71
UBDP1-202ENST00000457888 RASA4O43374 803 aa4.37□□□□□ -1.71
UBDP1-202ENST00000457888 NBNO60934 754 aa4.37□□□□□ -1.71
UBDP1-202ENST00000457888 ZBED4O75132 1171 aa4.37□□□□□ -1.71
UBDP1-202ENST00000457888 TCEA3O75764 348 aa4.37□□□□□ -1.71
UBDP1-202ENST00000457888 ARIH2O95376 493 aa4.37□□□□□ -1.71
UBDP1-202ENST00000457888 AHSGP02765 367 aa4.37□□□□□ -1.71
UBDP1-202ENST00000457888 HOXC6P09630 235 aa4.37□□□□□ -1.71
UBDP1-202ENST00000457888 SBK3P0C264 359 aa4.37□□□□□ -1.71
UBDP1-202ENST00000457888 TNFSF4P23510 183 aa4.37□□□□□ -1.71
UBDP1-202ENST00000457888 DDIT3P35638 169 aa4.37□□□□□ -1.71
UBDP1-202ENST00000457888 ALDH1A3P47895 512 aa4.37□□□□□ -1.71
UBDP1-202ENST00000457888 METAP2P50579 478 aaKnown RBP eCLIP4.37□□□□□ -1.71
UBDP1-202ENST00000457888 HSD17B4P51659 736 aa4.37□□□□□ -1.71
UBDP1-202ENST00000457888 OAZ1P54368 228 aa4.37□□□□□ -1.71
UBDP1-202ENST00000457888 SOX10P56693 466 aa4.37□□□□□ -1.71
UBDP1-202ENST00000457888 RPS6P62753 249 aaKnown RBP4.37□□□□□ -1.71
UBDP1-202ENST00000457888 IRX3P78415 501 aaPredicted RBP4.37□□□□□ -1.71
UBDP1-202ENST00000457888 FMO1Q01740 532 aa4.37□□□□□ -1.71
UBDP1-202ENST00000457888 SP140Q13342 867 aa4.37□□□□□ -1.71
UBDP1-202ENST00000457888 GRB14Q14449 540 aa4.37□□□□□ -1.71
UBDP1-202ENST00000457888 PPP2R5BQ15173 497 aa4.37□□□□□ -1.71
UBDP1-202ENST00000457888 CDC37Q16543 378 aaPredicted RBP4.37□□□□□ -1.71
UBDP1-202ENST00000457888 PFKFB3Q16875 520 aaPredicted RBP4.37□□□□□ -1.71
UBDP1-202ENST00000457888 CCDC96Q2M329 555 aa4.37□□□□□ -1.71
UBDP1-202ENST00000457888 FLYWCH1Q4VC44 716 aa4.37□□□□□ -1.71
UBDP1-202ENST00000457888 PRAMEF19Q5SWL8 479 aa4.37□□□□□ -1.71
UBDP1-202ENST00000457888 SNRNP48Q6IEG0 339 aaKnown RBP4.37□□□□□ -1.71
UBDP1-202ENST00000457888 USP17L6PQ6QN14 398 aa4.37□□□□□ -1.71
UBDP1-202ENST00000457888 MED25Q71SY5 747 aa4.37□□□□□ -1.71
UBDP1-202ENST00000457888 GPR142Q7Z601 462 aa4.37□□□□□ -1.71
UBDP1-202ENST00000457888 SESTD1Q86VW0 696 aa4.37□□□□□ -1.71
UBDP1-202ENST00000457888 CCDC83Q8IWF9 413 aa4.37□□□□□ -1.71
UBDP1-202ENST00000457888 CYP2W1Q8TAV3 490 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms