RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.07■□□□□ 0.32
CCDC90B-202ENST00000455220 ATP2A3Q93084 1043 aa17.07■□□□□ 0.32
CCDC90B-202ENST00000455220 RPGRIP1Q96KN7 1286 aa17.07■□□□□ 0.32
CCDC90B-202ENST00000455220 NAP1L3Q99457 506 aaPredicted RBP17.07■□□□□ 0.32
CCDC90B-202ENST00000455220 KLC2Q9H0B6 622 aa17.07■□□□□ 0.32
CCDC90B-202ENST00000455220 DONSONQ9NYP3 566 aa17.07■□□□□ 0.32
CCDC90B-202ENST00000455220 THEGQ9P2T0 379 aa17.07■□□□□ 0.32
CCDC90B-202ENST00000455220 MRFAP1Q9Y605 127 aa17.07■□□□□ 0.32
CCDC90B-202ENST00000455220 TCRBV7S2A1N4TA0A589 114 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 APOC4-APOC2K7ER74 178 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 TBL1XO60907 577 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 NFATC1O95644 943 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 APOC2P02655 101 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 CYBBP04839 570 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 CYP17A1P05093 508 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 TGM2P21980 687 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 HOXD9P28356 352 aaPredicted RBP17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 GRM2Q14416 872 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 DHCR24Q15392 516 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 SIX1Q15475 284 aaPredicted RBP17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 DNTTIP2Q5QJE6 756 aaKnown RBP17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 TRIM68Q6AZZ1 485 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 TMCO3Q6UWJ1 677 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 TPGS1Q6ZTW0 290 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 YAF2Q8IY57 180 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 ZFYVE19Q96K21 471 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 CAPZA3Q96KX2 299 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 HPS4Q9NQG7 708 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 NDFIP2Q9NV92 336 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 MFHAS1Q9Y4C4 1052 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 CHD5Q8TDI0 1954 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 LOC730098B7Z3J9 87 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 ARNTLO00327 626 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 SERPINB6P35237 376 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 LONRF2Q1L5Z9 754 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 AAK1Q2M2I8 961 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 LY6G5CQ5SRR4 150 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 TFAP2DQ7Z6R9 452 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 UMODL1-AS1Q8N2C9 162 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 LZTR1Q8N653 840 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 NPWQ8N729 165 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 DDI1Q8WTU0 396 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 MAIP1Q8WWC4 291 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 TRMT61BQ9BVS5 477 aaKnown RBP17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 KCNK12Q9HB15 430 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 SMARCAL1Q9NZC9 954 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 IGSF9Q9P2J2 1179 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 TBC1D30Q9Y2I9 924 aa17.06■□□□□ 0.32
CCDC90B-202ENST00000455220 PDE2AO00408 941 aaPredicted RBP17.05■□□□□ 0.32
CCDC90B-202ENST00000455220 HOXC11O43248 304 aaPredicted RBP17.05■□□□□ 0.32
CCDC90B-202ENST00000455220 LUC7L3O95232 432 aaKnown RBP17.05■□□□□ 0.32
CCDC90B-202ENST00000455220 ADH1CP00326 375 aa17.05■□□□□ 0.32
CCDC90B-202ENST00000455220 ARSAP15289 507 aa17.05■□□□□ 0.32
CCDC90B-202ENST00000455220 DYNLT1P63172 113 aa17.05■□□□□ 0.32
CCDC90B-202ENST00000455220 GBE1Q04446 702 aa17.05■□□□□ 0.32
CCDC90B-202ENST00000455220 WHAMMP3Q1A5X7 153 aa17.05■□□□□ 0.32
CCDC90B-202ENST00000455220 AFMIDQ63HM1 303 aa17.05■□□□□ 0.32
CCDC90B-202ENST00000455220 SETD3Q86TU7 594 aaPredicted RBP17.05■□□□□ 0.32
CCDC90B-202ENST00000455220 RSAD2Q8WXG1 361 aa17.05■□□□□ 0.32
CCDC90B-202ENST00000455220 BBS2Q9BXC9 721 aa17.05■□□□□ 0.32
CCDC90B-202ENST00000455220 EBF3Q9H4W6 596 aa17.05■□□□□ 0.32
CCDC90B-202ENST00000455220 ECT2Q9H8V3 914 aa17.05■□□□□ 0.32
CCDC90B-202ENST00000455220 PRKAG3Q9UGI9 489 aa17.05■□□□□ 0.32
CCDC90B-202ENST00000455220 LIMD1Q9UGP4 676 aa17.05■□□□□ 0.32
CCDC90B-202ENST00000455220 NUP205Q92621 2012 aa17.04■□□□□ 0.32
CCDC90B-202ENST00000455220 COL4A3Q01955 1670 aa17.04■□□□□ 0.32
CCDC90B-202ENST00000455220 MFSD11O43934 449 aa17.04■□□□□ 0.32
CCDC90B-202ENST00000455220 ADH5P11766 374 aa17.04■□□□□ 0.32
CCDC90B-202ENST00000455220 PECAM1P16284 738 aaPredicted RBP17.04■□□□□ 0.32
CCDC90B-202ENST00000455220 OR1E1P30953 314 aa17.04■□□□□ 0.32
CCDC90B-202ENST00000455220 GDI1P31150 447 aa17.04■□□□□ 0.32
CCDC90B-202ENST00000455220 PAFAH1B1P43034 410 aa17.04■□□□□ 0.32
CCDC90B-202ENST00000455220 NR2C2P49116 596 aa17.04■□□□□ 0.32
CCDC90B-202ENST00000455220 GAD2Q05329 585 aa17.04■□□□□ 0.32
CCDC90B-202ENST00000455220 CCDC181Q5TID7 509 aa17.04■□□□□ 0.32
CCDC90B-202ENST00000455220 CXorf57Q6NSI4 855 aaKnown RBP17.04■□□□□ 0.32
CCDC90B-202ENST00000455220 ZNF572Q7Z3I7 529 aaPredicted RBP17.04■□□□□ 0.32
CCDC90B-202ENST00000455220 ARHGAP12Q8IWW6 846 aa17.04■□□□□ 0.32
CCDC90B-202ENST00000455220 TTC13Q8NBP0 860 aa17.04■□□□□ 0.32
CCDC90B-202ENST00000455220 NOL6Q9H6R4 1146 aaKnown RBP17.04■□□□□ 0.32
CCDC90B-202ENST00000455220 LRRC19Q9H756 370 aa17.04■□□□□ 0.32
CCDC90B-202ENST00000455220 L2HGDHQ9H9P8 463 aa17.04■□□□□ 0.32
CCDC90B-202ENST00000455220 PLK2Q9NYY3 685 aa17.04■□□□□ 0.32
CCDC90B-202ENST00000455220 DTLQ9NZJ0 730 aa17.04■□□□□ 0.32
CCDC90B-202ENST00000455220 RAD54BQ9Y620 910 aa17.04■□□□□ 0.32
CCDC90B-202ENST00000455220 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.03■□□□□ 0.32
CCDC90B-202ENST00000455220 OTOL1A6NHN0 477 aaPredicted RBP17.03■□□□□ 0.32
CCDC90B-202ENST00000455220 NEDD8-MDP1E9PL57 170 aa17.03■□□□□ 0.32
CCDC90B-202ENST00000455220 TYRP14679 529 aa17.03■□□□□ 0.32
CCDC90B-202ENST00000455220 NDST2P52849 883 aa17.03■□□□□ 0.32
CCDC90B-202ENST00000455220 TNK2Q07912 1038 aa17.03■□□□□ 0.32
CCDC90B-202ENST00000455220 SLC10A2Q12908 348 aaPredicted RBP17.03■□□□□ 0.32
CCDC90B-202ENST00000455220 ZNF177Q13360 481 aaPredicted RBP17.03■□□□□ 0.32
CCDC90B-202ENST00000455220 RUNX3Q13761 415 aa17.03■□□□□ 0.32
CCDC90B-202ENST00000455220 GAB4Q2WGN9 574 aa17.03■□□□□ 0.32
CCDC90B-202ENST00000455220 C6orf118Q5T5N4 469 aa17.03■□□□□ 0.32
CCDC90B-202ENST00000455220 NPNTQ6UXI9 565 aa17.03■□□□□ 0.32
CCDC90B-202ENST00000455220 ADAT2Q7Z6V5 191 aaKnown RBP17.03■□□□□ 0.32
CCDC90B-202ENST00000455220 ADHFE1Q8IWW8 467 aa17.03■□□□□ 0.32
CCDC90B-202ENST00000455220 CPA6Q8N4T0 437 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms