RNA–Protein interactions for RNA: ENST00000454354.1

USP40-210, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-210ENST00000454354 M0QYT0 321 aa12.43□□□□□ -0.42
USP40-210ENST00000454354 EPHB6O15197 1021 aa12.43□□□□□ -0.42
USP40-210ENST00000454354 KCNK5O95279 499 aa12.43□□□□□ -0.42
USP40-210ENST00000454354 MOCS3O95396 460 aa12.43□□□□□ -0.42
USP40-210ENST00000454354 MMEP08473 750 aa12.43□□□□□ -0.42
USP40-210ENST00000454354 CXCR3P49682 368 aa12.43□□□□□ -0.42
USP40-210ENST00000454354 PLK1P53350 603 aa12.43□□□□□ -0.42
USP40-210ENST00000454354 COPB1P53618 953 aaKnown RBP12.43□□□□□ -0.42
USP40-210ENST00000454354 POLR2FP61218 127 aaKnown RBP12.43□□□□□ -0.42
USP40-210ENST00000454354 ST8SIA6P61647 398 aa12.43□□□□□ -0.42
USP40-210ENST00000454354 RPS14P62263 151 aaKnown RBP12.43□□□□□ -0.42
USP40-210ENST00000454354 CDR2Q01850 454 aa12.43□□□□□ -0.42
USP40-210ENST00000454354 AUHQ13825 339 aaKnown RBP12.43□□□□□ -0.42
USP40-210ENST00000454354 NCAPHQ15003 741 aa12.43□□□□□ -0.42
USP40-210ENST00000454354 BRMS1LQ5PSV4 323 aa12.43□□□□□ -0.42
USP40-210ENST00000454354 FAM102AQ5T9C2 384 aaPredicted RBP12.43□□□□□ -0.42
USP40-210ENST00000454354 TAF3Q5VWG9 929 aa12.43□□□□□ -0.42
USP40-210ENST00000454354 CXorf57Q6NSI4 855 aaKnown RBP12.43□□□□□ -0.42
USP40-210ENST00000454354 FBXL22Q6P050 247 aa12.43□□□□□ -0.42
USP40-210ENST00000454354 ARCQ7LC44 396 aa12.43□□□□□ -0.42
USP40-210ENST00000454354 APTXQ7Z2E3 356 aaKnown RBP12.43□□□□□ -0.42
USP40-210ENST00000454354 BNIPLQ7Z465 357 aa12.43□□□□□ -0.42
USP40-210ENST00000454354 ERICH1Q86X53 443 aa12.43□□□□□ -0.42
USP40-210ENST00000454354 CACUL1Q86Y37 369 aa12.43□□□□□ -0.42
USP40-210ENST00000454354 CCAR2Q8N163 923 aaKnown RBP12.43□□□□□ -0.42
USP40-210ENST00000454354 MSANTD4Q8NCY6 345 aa12.43□□□□□ -0.42
USP40-210ENST00000454354 ANKRD20A12PQ8NF67 263 aa12.43□□□□□ -0.42
USP40-210ENST00000454354 RNF34Q969K3 372 aa12.43□□□□□ -0.42
USP40-210ENST00000454354 GPR174Q9BXC1 333 aa12.43□□□□□ -0.42
USP40-210ENST00000454354 RSPH9Q9H1X1 276 aaPredicted RBP12.43□□□□□ -0.42
USP40-210ENST00000454354 HSD3B7Q9H2F3 369 aa12.43□□□□□ -0.42
USP40-210ENST00000454354 FAM207AQ9NSI2 230 aaPredicted RBP12.43□□□□□ -0.42
USP40-210ENST00000454354 PIGVQ9NUD9 493 aa12.43□□□□□ -0.42
USP40-210ENST00000454354 ARHGEF38Q9NXL2 777 aa12.43□□□□□ -0.42
USP40-210ENST00000454354 STAP1Q9ULZ2 295 aa12.43□□□□□ -0.42
USP40-210ENST00000454354 HS3ST4Q9Y661 456 aa12.43□□□□□ -0.42
USP40-210ENST00000454354 CABIN1Q9Y6J0 2220 aa12.43□□□□□ -0.42
USP40-210ENST00000454354 LRRC10BA6NIK2 292 aa12.42□□□□□ -0.42
USP40-210ENST00000454354 METTL12A8MUP2 240 aa12.42□□□□□ -0.42
USP40-210ENST00000454354 PAGE1O75459 146 aa12.42□□□□□ -0.42
USP40-210ENST00000454354 GFPT2O94808 682 aa12.42□□□□□ -0.42
USP40-210ENST00000454354 CYP1A1P04798 512 aaPredicted RBP12.42□□□□□ -0.42
USP40-210ENST00000454354 CFIP05156 583 aa12.42□□□□□ -0.42
USP40-210ENST00000454354 TFE3P19532 575 aaPredicted RBP12.42□□□□□ -0.42
USP40-210ENST00000454354 CSRP1P21291 193 aaKnown RBP12.42□□□□□ -0.42
USP40-210ENST00000454354 SOX5P35711 763 aa12.42□□□□□ -0.42
USP40-210ENST00000454354 CTSOP43234 321 aaPredicted RBP12.42□□□□□ -0.42
USP40-210ENST00000454354 VASPP50552 380 aaPredicted RBP12.42□□□□□ -0.42
USP40-210ENST00000454354 OXCT1P55809 520 aa12.42□□□□□ -0.42
USP40-210ENST00000454354 ECT2LQ008S8 904 aa12.42□□□□□ -0.42
USP40-210ENST00000454354 FMO1Q01740 532 aa12.42□□□□□ -0.42
USP40-210ENST00000454354 CENPCQ03188 943 aa12.42□□□□□ -0.42
USP40-210ENST00000454354 GFPT1Q06210 699 aaPredicted RBP12.42□□□□□ -0.42
USP40-210ENST00000454354 NME3Q13232 169 aa12.42□□□□□ -0.42
USP40-210ENST00000454354 SLC25A52Q3SY17 297 aa12.42□□□□□ -0.42
USP40-210ENST00000454354 TTC31Q49AM3 519 aaPredicted RBP12.42□□□□□ -0.42
USP40-210ENST00000454354 DCAF12L1Q5VU92 463 aa12.42□□□□□ -0.42
USP40-210ENST00000454354 ZNF776Q68DI1 518 aaPredicted RBP12.42□□□□□ -0.42
USP40-210ENST00000454354 CIR1Q86X95 450 aaPredicted RBP12.42□□□□□ -0.42
USP40-210ENST00000454354 RGL4Q8IZJ4 473 aa12.42□□□□□ -0.42
USP40-210ENST00000454354 APCDD1Q8J025 514 aa12.42□□□□□ -0.42
USP40-210ENST00000454354 SLC20A1Q8WUM9 679 aa12.42□□□□□ -0.42
USP40-210ENST00000454354 IGSF8Q969P0 613 aa12.42□□□□□ -0.42
USP40-210ENST00000454354 RPRD1AQ96P16 312 aaPredicted RBP12.42□□□□□ -0.42
USP40-210ENST00000454354 TMEM63CQ9P1W3 806 aa12.42□□□□□ -0.42
USP40-210ENST00000454354 TMEM59LQ9UK28 342 aa12.42□□□□□ -0.42
USP40-210ENST00000454354 SCML1Q9UN30 329 aa12.42□□□□□ -0.42
USP40-210ENST00000454354 PAXBP1Q9Y5B6 917 aa12.42□□□□□ -0.42
USP40-210ENST00000454354 USP24Q9UPU5 2620 aa12.42□□□□□ -0.42
USP40-210ENST00000454354 DOCK9Q9BZ29 2069 aa12.42□□□□□ -0.42
USP40-210ENST00000454354 EDDM13A0A1B0GTR0 161 aa12.41□□□□□ -0.42
USP40-210ENST00000454354 TARSL2A2RTX5 802 aaKnown RBP12.41□□□□□ -0.42
USP40-210ENST00000454354 MEI4A8MW99 385 aa12.41□□□□□ -0.42
USP40-210ENST00000454354 UPK3BL1B0FP48 263 aa12.41□□□□□ -0.42
USP40-210ENST00000454354 UPK3BL2E5RIL1 263 aa12.41□□□□□ -0.42
USP40-210ENST00000454354 I6L893 689 aaPredicted RBP12.41□□□□□ -0.42
USP40-210ENST00000454354 ARHGAP33O14559 1287 aa12.41□□□□□ -0.42
USP40-210ENST00000454354 SIN3BO75182 1162 aa12.41□□□□□ -0.42
USP40-210ENST00000454354 CLDN11O75508 207 aa12.41□□□□□ -0.42
USP40-210ENST00000454354 ADCY5O95622 1261 aa12.41□□□□□ -0.42
USP40-210ENST00000454354 F9P00740 461 aa12.41□□□□□ -0.42
USP40-210ENST00000454354 DNTTP04053 509 aa12.41□□□□□ -0.42
USP40-210ENST00000454354 GNSP15586 552 aa12.41□□□□□ -0.42
USP40-210ENST00000454354 PDGFRAP16234 1089 aa12.41□□□□□ -0.42
USP40-210ENST00000454354 CHRNB2P17787 502 aa12.41□□□□□ -0.42
USP40-210ENST00000454354 MMP8P22894 467 aa12.41□□□□□ -0.42
USP40-210ENST00000454354 FLT3P36888 993 aa12.41□□□□□ -0.42
USP40-210ENST00000454354 SULT1E1P49888 294 aa12.41□□□□□ -0.42
USP40-210ENST00000454354 IRAK1P51617 712 aa12.41□□□□□ -0.42
USP40-210ENST00000454354 TYRO3Q06418 890 aa12.41□□□□□ -0.42
USP40-210ENST00000454354 SULT2A1Q06520 285 aa12.41□□□□□ -0.42
USP40-210ENST00000454354 SYCP1Q15431 976 aa12.41□□□□□ -0.42
USP40-210ENST00000454354 C9orf64Q5T6V5 341 aa12.41□□□□□ -0.42
USP40-210ENST00000454354 ACBD5Q5T8D3 534 aaPredicted RBP12.41□□□□□ -0.42
USP40-210ENST00000454354 NAA35Q5VZE5 725 aa12.41□□□□□ -0.42
USP40-210ENST00000454354 TRNP1Q6NT89 227 aa12.41□□□□□ -0.42
USP40-210ENST00000454354 USP30Q70CQ3 517 aa12.41□□□□□ -0.42
USP40-210ENST00000454354 ZNF683Q8IZ20 524 aa12.41□□□□□ -0.42
USP40-210ENST00000454354 C1orf216Q8TAB5 229 aa12.41□□□□□ -0.42
USP40-210ENST00000454354 CPA5Q8WXQ8 436 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms