RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 SORCS1Q8WY21 1168 aa18.16■□□□□ 0.5
FAM3A-216ENST00000449971 RNF34Q969K3 372 aa18.16■□□□□ 0.5
FAM3A-216ENST00000449971 TOE1Q96GM8 510 aaKnown RBP18.16■□□□□ 0.5
FAM3A-216ENST00000449971 SLC2A13Q96QE2 648 aa18.16■□□□□ 0.5
FAM3A-216ENST00000449971 NAT10Q9H0A0 1025 aaKnown RBP18.16■□□□□ 0.5
FAM3A-216ENST00000449971 GAREM1Q9H706 876 aa18.16■□□□□ 0.5
FAM3A-216ENST00000449971 FAM204AQ9H8W3 233 aa18.16■□□□□ 0.5
FAM3A-216ENST00000449971 NLRC4Q9NPP4 1024 aa18.16■□□□□ 0.5
FAM3A-216ENST00000449971 ASNSD1Q9NWL6 643 aa18.16■□□□□ 0.5
FAM3A-216ENST00000449971 COX16Q9P0S2 106 aa18.16■□□□□ 0.5
FAM3A-216ENST00000449971 THAP10Q9P2Z0 257 aaPredicted RBP18.16■□□□□ 0.5
FAM3A-216ENST00000449971 PCOLCE2Q9UKZ9 415 aa18.16■□□□□ 0.5
FAM3A-216ENST00000449971 GFPT2O94808 682 aa18.15■□□□□ 0.5
FAM3A-216ENST00000449971 CD6P30203 668 aa18.15■□□□□ 0.5
FAM3A-216ENST00000449971 HLA-FP30511 346 aa18.15■□□□□ 0.5
FAM3A-216ENST00000449971 SLC6A3Q01959 620 aa18.15■□□□□ 0.5
FAM3A-216ENST00000449971 NCAPHQ15003 741 aa18.15■□□□□ 0.5
FAM3A-216ENST00000449971 EIF4HQ15056 248 aaKnown RBP18.15■□□□□ 0.5
FAM3A-216ENST00000449971 E2F5Q15329 346 aa18.15■□□□□ 0.5
FAM3A-216ENST00000449971 SYCP1Q15431 976 aa18.15■□□□□ 0.5
FAM3A-216ENST00000449971 MPP7Q5T2T1 576 aa18.15■□□□□ 0.5
FAM3A-216ENST00000449971 OLFML1Q6UWY5 402 aa18.15■□□□□ 0.5
FAM3A-216ENST00000449971 NOP9Q86U38 636 aaKnown RBP18.15■□□□□ 0.5
FAM3A-216ENST00000449971 HJURPQ8NCD3 748 aaPredicted RBP18.15■□□□□ 0.5
FAM3A-216ENST00000449971 CRELD1Q96HD1 420 aa18.15■□□□□ 0.5
FAM3A-216ENST00000449971 IRX2Q9BZI1 471 aaPredicted RBP18.15■□□□□ 0.5
FAM3A-216ENST00000449971 NUCKS1Q9H1E3 243 aaKnown RBP18.15■□□□□ 0.5
FAM3A-216ENST00000449971 ABCB8Q9NUT2 735 aa18.15■□□□□ 0.5
FAM3A-216ENST00000449971 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.15■□□□□ 0.5
FAM3A-216ENST00000449971 DDIT4Q9NX09 232 aa18.15■□□□□ 0.5
FAM3A-216ENST00000449971 SLC12A6Q9UHW9 1150 aa18.15■□□□□ 0.5
FAM3A-216ENST00000449971 XPO7Q9UIA9 1087 aaKnown RBP18.15■□□□□ 0.5
FAM3A-216ENST00000449971 FNDC3AQ9Y2H6 1198 aaKnown RBP18.15■□□□□ 0.5
FAM3A-216ENST00000449971 A0A1B0GTW7 788 aa18.14■□□□□ 0.49
FAM3A-216ENST00000449971 TYW5A2RUC4 315 aaKnown RBP18.14■□□□□ 0.49
FAM3A-216ENST00000449971 LGALS16A8MUM7 142 aa18.14■□□□□ 0.49
FAM3A-216ENST00000449971 NPC1O15118 1278 aa18.14■□□□□ 0.49
FAM3A-216ENST00000449971 ATXN1LP0C7T5 689 aaKnown RBP18.14■□□□□ 0.49
FAM3A-216ENST00000449971 IL12RB1P42701 662 aa18.14■□□□□ 0.49
FAM3A-216ENST00000449971 RNASE9P60153 205 aaKnown RBP18.14■□□□□ 0.49
FAM3A-216ENST00000449971 UBXN1Q04323 297 aa18.14■□□□□ 0.49
FAM3A-216ENST00000449971 CYP4F3Q08477 520 aa18.14■□□□□ 0.49
FAM3A-216ENST00000449971 ZNF234Q14588 700 aa18.14■□□□□ 0.49
FAM3A-216ENST00000449971 STARD3Q14849 445 aa18.14■□□□□ 0.49
FAM3A-216ENST00000449971 ANO6Q4KMQ2 910 aa18.14■□□□□ 0.49
FAM3A-216ENST00000449971 TMEM215Q68D42 235 aa18.14■□□□□ 0.49
FAM3A-216ENST00000449971 CHST9Q7L1S5 443 aa18.14■□□□□ 0.49
FAM3A-216ENST00000449971 ERICH1Q86X53 443 aa18.14■□□□□ 0.49
FAM3A-216ENST00000449971 CCDC117Q8IWD4 279 aaPredicted RBP18.14■□□□□ 0.49
FAM3A-216ENST00000449971 ATP6V0D2Q8N8Y2 350 aa18.14■□□□□ 0.49
FAM3A-216ENST00000449971 WFIKKN2Q8TEU8 576 aa18.14■□□□□ 0.49
FAM3A-216ENST00000449971 SNX19Q92543 992 aa18.14■□□□□ 0.49
FAM3A-216ENST00000449971 MYEOVQ96EZ4 313 aa18.14■□□□□ 0.49
FAM3A-216ENST00000449971 SPAG5Q96R06 1193 aa18.14■□□□□ 0.49
FAM3A-216ENST00000449971 ZDHHC5Q9C0B5 715 aa18.14■□□□□ 0.49
FAM3A-216ENST00000449971 CD248Q9HCU0 757 aa18.14■□□□□ 0.49
FAM3A-216ENST00000449971 GGA2Q9UJY4 613 aa18.14■□□□□ 0.49
FAM3A-216ENST00000449971 SIK3Q9Y2K2 1263 aa18.14■□□□□ 0.49
FAM3A-216ENST00000449971 KNL1Q8NG31 2342 aa18.14■□□□□ 0.49
FAM3A-216ENST00000449971 FAM149AA5PLN7 773 aa18.13■□□□□ 0.49
FAM3A-216ENST00000449971 LRRC10BA6NIK2 292 aa18.13■□□□□ 0.49
FAM3A-216ENST00000449971 EPHB6O15197 1021 aa18.13■□□□□ 0.49
FAM3A-216ENST00000449971 SYNCRIPO60506 623 aaKnown RBP18.13■□□□□ 0.49
FAM3A-216ENST00000449971 CBFA2T3O75081 653 aa18.13■□□□□ 0.49
FAM3A-216ENST00000449971 IGLV3-25P01717 112 aa18.13■□□□□ 0.49
FAM3A-216ENST00000449971 MMEP08473 750 aa18.13■□□□□ 0.49
FAM3A-216ENST00000449971 PABPC1P11940 636 aaKnown RBP18.13■□□□□ 0.49
FAM3A-216ENST00000449971 ZNF18P17022 549 aa18.13■□□□□ 0.49
FAM3A-216ENST00000449971 CDH5P33151 784 aaPredicted RBP18.13■□□□□ 0.49
FAM3A-216ENST00000449971 SOX5P35711 763 aa18.13■□□□□ 0.49
FAM3A-216ENST00000449971 MATKP42679 507 aa18.13■□□□□ 0.49
FAM3A-216ENST00000449971 RPS24P62847 133 aaKnown RBP18.13■□□□□ 0.49
FAM3A-216ENST00000449971 NME3Q13232 169 aa18.13■□□□□ 0.49
FAM3A-216ENST00000449971 FUT11Q495W5 492 aa18.13■□□□□ 0.49
FAM3A-216ENST00000449971 MS4A13Q5J8X5 152 aa18.13■□□□□ 0.49
FAM3A-216ENST00000449971 DCAF12L1Q5VU92 463 aa18.13■□□□□ 0.49
FAM3A-216ENST00000449971 RAP1GAP2Q684P5 730 aa18.13■□□□□ 0.49
FAM3A-216ENST00000449971 SLC26A9Q7LBE3 791 aa18.13■□□□□ 0.49
FAM3A-216ENST00000449971 CHSY1Q86X52 802 aa18.13■□□□□ 0.49
FAM3A-216ENST00000449971 ZDHHC17Q8IUH5 632 aa18.13■□□□□ 0.49
FAM3A-216ENST00000449971 MFN1Q8IWA4 741 aa18.13■□□□□ 0.49
FAM3A-216ENST00000449971 LGI2Q8N0V4 545 aa18.13■□□□□ 0.49
FAM3A-216ENST00000449971 CFAP52Q8N1V2 620 aa18.13■□□□□ 0.49
FAM3A-216ENST00000449971 CARNMT1Q8N4J0 409 aa18.13■□□□□ 0.49
FAM3A-216ENST00000449971 NEK11Q8NG66 645 aa18.13■□□□□ 0.49
FAM3A-216ENST00000449971 RHBDD1Q8TEB9 315 aa18.13■□□□□ 0.49
FAM3A-216ENST00000449971 C18orf8Q96DM3 657 aa18.13■□□□□ 0.49
FAM3A-216ENST00000449971 BTN2A3PQ96KV6 586 aa18.13■□□□□ 0.49
FAM3A-216ENST00000449971 PRICKLE1Q96MT3 831 aaPredicted RBP18.13■□□□□ 0.49
FAM3A-216ENST00000449971 DCBLD2Q96PD2 775 aa18.13■□□□□ 0.49
FAM3A-216ENST00000449971 TM7SF3Q9NS93 570 aa18.13■□□□□ 0.49
FAM3A-216ENST00000449971 PLA2G4CQ9UP65 541 aa18.13■□□□□ 0.49
FAM3A-216ENST00000449971 SETXQ7Z333 2677 aaKnown RBP18.13■□□□□ 0.49
FAM3A-216ENST00000449971 KCNU1A8MYU2 1149 aa18.12■□□□□ 0.49
FAM3A-216ENST00000449971 DAB1O75553 588 aa18.12■□□□□ 0.49
FAM3A-216ENST00000449971 LSM8O95777 96 aaKnown RBP18.12■□□□□ 0.49
FAM3A-216ENST00000449971 CER1O95813 267 aa18.12■□□□□ 0.49
FAM3A-216ENST00000449971 SLC2A3P11169 496 aa18.12■□□□□ 0.49
FAM3A-216ENST00000449971 ABCB4P21439 1286 aa18.12■□□□□ 0.49
FAM3A-216ENST00000449971 TACR2P21452 398 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms