RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 IGHV4-34P06331 123 aa29.25■■■□□ 2.27
CBX4-202ENST00000448310 SLC9A1P19634 815 aa29.25■■■□□ 2.27
CBX4-202ENST00000448310 GRIA4P48058 902 aa29.25■■■□□ 2.27
CBX4-202ENST00000448310 PDCLQ13371 301 aa29.25■■■□□ 2.27
CBX4-202ENST00000448310 KCNT1Q5JUK3 1230 aa29.25■■■□□ 2.27
CBX4-202ENST00000448310 C9orf64Q5T6V5 341 aa29.25■■■□□ 2.27
CBX4-202ENST00000448310 GLRX5Q86SX6 157 aa29.25■■■□□ 2.27
CBX4-202ENST00000448310 MMAAQ8IVH4 418 aaKnown RBP29.25■■■□□ 2.27
CBX4-202ENST00000448310 OSGEPQ9NPF4 335 aa29.25■■■□□ 2.27
CBX4-202ENST00000448310 KIAA1522Q9P206 1035 aaPredicted RBP29.25■■■□□ 2.27
CBX4-202ENST00000448310 SLCO3A1Q9UIG8 710 aa29.25■■■□□ 2.27
CBX4-202ENST00000448310 A0A1W2PP55 124 aa29.24■■■□□ 2.27
CBX4-202ENST00000448310 RNASEH1O60930 286 aaKnown RBP29.24■■■□□ 2.27
CBX4-202ENST00000448310 FGFR1OPO95684 399 aaKnown RBP29.24■■■□□ 2.27
CBX4-202ENST00000448310 CST6Q15828 149 aa29.24■■■□□ 2.27
CBX4-202ENST00000448310 KIAA0895LQ68EN5 471 aa29.24■■■□□ 2.27
CBX4-202ENST00000448310 USP30Q70CQ3 517 aa29.24■■■□□ 2.27
CBX4-202ENST00000448310 CIR1Q86X95 450 aaPredicted RBP29.24■■■□□ 2.27
CBX4-202ENST00000448310 BAHD1Q8TBE0 780 aaPredicted RBP29.24■■■□□ 2.27
CBX4-202ENST00000448310 RHBDD1Q8TEB9 315 aa29.24■■■□□ 2.27
CBX4-202ENST00000448310 BTN2A3PQ96KV6 586 aa29.24■■■□□ 2.27
CBX4-202ENST00000448310 RPL10LQ96L21 214 aaKnown RBP29.24■■■□□ 2.27
CBX4-202ENST00000448310 MED15Q96RN5 788 aa29.24■■■□□ 2.27
CBX4-202ENST00000448310 THAP9Q9H5L6 903 aa29.24■■■□□ 2.27
CBX4-202ENST00000448310 PCDHGB2Q9Y5G2 931 aa29.24■■■□□ 2.27
CBX4-202ENST00000448310 SYNJ2BP-COX16A0A087WUM0 186 aa29.23■■■□□ 2.27
CBX4-202ENST00000448310 FLRT2O43155 660 aa29.23■■■□□ 2.27
CBX4-202ENST00000448310 MOCS3O95396 460 aa29.23■■■□□ 2.27
CBX4-202ENST00000448310 SRPRAP08240 638 aaKnown RBP29.23■■■□□ 2.27
CBX4-202ENST00000448310 ECT2LQ008S8 904 aa29.23■■■□□ 2.27
CBX4-202ENST00000448310 DBX2Q6ZNG2 339 aa29.23■■■□□ 2.27
CBX4-202ENST00000448310 ENOSF1Q7L5Y1 443 aa29.23■■■□□ 2.27
CBX4-202ENST00000448310 PASD1Q8IV76 773 aa29.23■■■□□ 2.27
CBX4-202ENST00000448310 KDM1BQ8NB78 822 aa29.23■■■□□ 2.27
CBX4-202ENST00000448310 NEUROG2Q9H2A3 272 aa29.23■■■□□ 2.27
CBX4-202ENST00000448310 FAM204AQ9H8W3 233 aa29.23■■■□□ 2.27
CBX4-202ENST00000448310 COX16Q9P0S2 106 aa29.23■■■□□ 2.27
CBX4-202ENST00000448310 SCML1Q9UN30 329 aa29.23■■■□□ 2.27
CBX4-202ENST00000448310 ATXN1LP0C7T5 689 aaKnown RBP29.22■■■□□ 2.27
CBX4-202ENST00000448310 STK19P49842 368 aaPredicted RBP29.22■■■□□ 2.27
CBX4-202ENST00000448310 GALCP54803 685 aa29.22■■■□□ 2.27
CBX4-202ENST00000448310 ARID5BQ14865 1188 aa29.22■■■□□ 2.27
CBX4-202ENST00000448310 CAMK4Q16566 473 aa29.22■■■□□ 2.27
CBX4-202ENST00000448310 NCEH1Q6PIU2 408 aa29.22■■■□□ 2.27
CBX4-202ENST00000448310 ADAT2Q7Z6V5 191 aaKnown RBP29.22■■■□□ 2.27
CBX4-202ENST00000448310 WDTC1Q8N5D0 677 aa29.22■■■□□ 2.27
CBX4-202ENST00000448310 ATP6V0D2Q8N8Y2 350 aa29.22■■■□□ 2.27
CBX4-202ENST00000448310 CPXM1Q96SM3 734 aa29.22■■■□□ 2.27
CBX4-202ENST00000448310 TOR4AQ9NXH8 423 aa29.22■■■□□ 2.27
CBX4-202ENST00000448310 RWDD2AQ9UIY3 292 aa29.22■■■□□ 2.27
CBX4-202ENST00000448310 ITIH6Q6UXX5 1313 aa29.21■■■□□ 2.27
CBX4-202ENST00000448310 EDDM13A0A1B0GTR0 161 aa29.21■■■□□ 2.27
CBX4-202ENST00000448310 GOLGA8CPA6NN73 597 aa29.21■■■□□ 2.27
CBX4-202ENST00000448310 F5H5T6 163 aa29.21■■■□□ 2.27
CBX4-202ENST00000448310 H0Y8X5 98 aa29.21■■■□□ 2.27
CBX4-202ENST00000448310 TAF4O00268 1085 aa29.21■■■□□ 2.27
CBX4-202ENST00000448310 RNASEH2AO75792 299 aaKnown RBP29.21■■■□□ 2.27
CBX4-202ENST00000448310 PSMD8P48556 350 aa29.21■■■□□ 2.27
CBX4-202ENST00000448310 EIF4EBP2Q13542 120 aaPredicted RBP29.21■■■□□ 2.27
CBX4-202ENST00000448310 RNF219Q5W0B1 726 aaPredicted RBP29.21■■■□□ 2.27
CBX4-202ENST00000448310 DEFB106AQ8N104 65 aa29.21■■■□□ 2.27
CBX4-202ENST00000448310 STK40Q8N2I9 435 aa29.21■■■□□ 2.27
CBX4-202ENST00000448310 SLC6A18Q96N87 628 aa29.21■■■□□ 2.27
CBX4-202ENST00000448310 FAM129BQ96TA1 746 aa29.21■■■□□ 2.27
CBX4-202ENST00000448310 OMDQ99983 421 aa29.21■■■□□ 2.27
CBX4-202ENST00000448310 SLTMQ9NWH9 1034 aaKnown RBP eCLIP29.21■■■□□ 2.273e-8■■■■■ 30.4
CBX4-202ENST00000448310 KIAA1468Q9P260 1216 aa29.21■■■□□ 2.27
CBX4-202ENST00000448310 ANKRD11Q6UB99 2663 aaPredicted RBP29.21■■■□□ 2.27
CBX4-202ENST00000448310 TARSL2A2RTX5 802 aaKnown RBP29.2■■■□□ 2.26
CBX4-202ENST00000448310 KCNU1A8MYU2 1149 aa29.2■■■□□ 2.26
CBX4-202ENST00000448310 GRAP2O75791 330 aa29.2■■■□□ 2.26
CBX4-202ENST00000448310 PDGFRAP16234 1089 aa29.2■■■□□ 2.26
CBX4-202ENST00000448310 SLC8A1P32418 973 aa29.2■■■□□ 2.26
CBX4-202ENST00000448310 IL9RQ01113 521 aa29.2■■■□□ 2.26
CBX4-202ENST00000448310 SCAPQ12770 1279 aa29.2■■■□□ 2.26
CBX4-202ENST00000448310 SUZ12Q15022 739 aaKnown RBP29.2■■■□□ 2.26
CBX4-202ENST00000448310 GBP6Q6ZN66 633 aa29.2■■■□□ 2.26
CBX4-202ENST00000448310 CCAR2Q8N163 923 aaKnown RBP29.2■■■□□ 2.26
CBX4-202ENST00000448310 IGSF8Q969P0 613 aa29.2■■■□□ 2.26
CBX4-202ENST00000448310 PRMT1Q99873 361 aaKnown RBP29.2■■■□□ 2.26
CBX4-202ENST00000448310 EBF2Q9HAK2 575 aa29.2■■■□□ 2.26
CBX4-202ENST00000448310 DDIT4Q9NX09 232 aa29.2■■■□□ 2.26
CBX4-202ENST00000448310 APEX2Q9UBZ4 518 aa29.2■■■□□ 2.26
CBX4-202ENST00000448310 AJAP1Q9UKB5 411 aaPredicted RBP29.2■■■□□ 2.26
CBX4-202ENST00000448310 FREM2Q5SZK8 3169 aa29.19■■■□□ 2.26
CBX4-202ENST00000448310 CAPNS1P04632 268 aa29.19■■■□□ 2.26
CBX4-202ENST00000448310 VAV1P15498 845 aa29.19■■■□□ 2.26
CBX4-202ENST00000448310 MZF1P28698 734 aaPredicted RBP29.19■■■□□ 2.26
CBX4-202ENST00000448310 CTSKP43235 329 aa29.19■■■□□ 2.26
CBX4-202ENST00000448310 CDK17Q00537 523 aa29.19■■■□□ 2.26
CBX4-202ENST00000448310 CCNI2Q6ZMN8 369 aaPredicted RBP29.19■■■□□ 2.26
CBX4-202ENST00000448310 AADATQ8N5Z0 425 aa29.19■■■□□ 2.26
CBX4-202ENST00000448310 SHC3Q92529 594 aa29.19■■■□□ 2.26
CBX4-202ENST00000448310 PTPRN2Q92932 1015 aa29.19■■■□□ 2.26
CBX4-202ENST00000448310 PPP1R13BQ96KQ4 1090 aa29.19■■■□□ 2.26
CBX4-202ENST00000448310 SLC2A13Q96QE2 648 aa29.19■■■□□ 2.26
CBX4-202ENST00000448310 CDC6Q99741 560 aa29.19■■■□□ 2.26
CBX4-202ENST00000448310 SLC12A6Q9UHW9 1150 aa29.19■■■□□ 2.26
CBX4-202ENST00000448310 DSPP15924 2871 aaKnown RBP29.19■■■□□ 2.26
CBX4-202ENST00000448310 GOLGA4Q13439 2230 aaKnown RBP29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms