RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 OXNAD1Q96HP4 312 aaPredicted RBP13.44□□□□□ -0.26
DDX56-206ENST00000446987 PLVAPQ9BX97 442 aa13.44□□□□□ -0.26
DDX56-206ENST00000446987 MAK16Q9BXY0 300 aaKnown RBP13.44□□□□□ -0.26
DDX56-206ENST00000446987 RRN3Q9NYV6 651 aa13.44□□□□□ -0.26
DDX56-206ENST00000446987 SELENONQ9NZV5 590 aa13.44□□□□□ -0.26
DDX56-206ENST00000446987 IGSF9Q9P2J2 1179 aa13.44□□□□□ -0.26
DDX56-206ENST00000446987 TAGLN3Q9UI15 199 aa13.44□□□□□ -0.26
DDX56-206ENST00000446987 SNX9Q9Y5X1 595 aa13.44□□□□□ -0.26
DDX56-206ENST00000446987 ALG6Q9Y672 507 aa13.44□□□□□ -0.26
DDX56-206ENST00000446987 FCHO1O14526 889 aa13.43□□□□□ -0.26
DDX56-206ENST00000446987 CNOT3O75175 753 aaKnown RBP13.43□□□□□ -0.26
DDX56-206ENST00000446987 OXSR1O95747 527 aaPredicted RBP13.43□□□□□ -0.26
DDX56-206ENST00000446987 CA4P22748 312 aa13.43□□□□□ -0.26
DDX56-206ENST00000446987 SEPT6Q14141 434 aa13.43□□□□□ -0.26
DDX56-206ENST00000446987 ZNF829Q3KNS6 432 aaPredicted RBP13.43□□□□□ -0.26
DDX56-206ENST00000446987 EFHC1Q5JVL4 640 aa13.43□□□□□ -0.26
DDX56-206ENST00000446987 C16orf87Q6PH81 154 aa13.43□□□□□ -0.26
DDX56-206ENST00000446987 CHSY1Q86X52 802 aa13.43□□□□□ -0.26
DDX56-206ENST00000446987 THNSL1Q8IYQ7 743 aa13.43□□□□□ -0.26
DDX56-206ENST00000446987 ZDHHC14Q8IZN3 488 aa13.43□□□□□ -0.26
DDX56-206ENST00000446987 TMEM130Q8N3G9 435 aa13.43□□□□□ -0.26
DDX56-206ENST00000446987 ZNF276Q8N554 614 aa13.43□□□□□ -0.26
DDX56-206ENST00000446987 LZTR1Q8N653 840 aa13.43□□□□□ -0.26
DDX56-206ENST00000446987 COLGALT1Q8NBJ5 622 aa13.43□□□□□ -0.26
DDX56-206ENST00000446987 RFWD2Q8NHY2 731 aa13.43□□□□□ -0.26
DDX56-206ENST00000446987 RIN3Q8TB24 985 aa13.43□□□□□ -0.26
DDX56-206ENST00000446987 LNX1Q8TBB1 728 aaPredicted RBP13.43□□□□□ -0.26
DDX56-206ENST00000446987 CHPT1Q8WUD6 406 aa13.43□□□□□ -0.26
DDX56-206ENST00000446987 BCL7CQ8WUZ0 217 aaPredicted RBP13.43□□□□□ -0.26
DDX56-206ENST00000446987 ARNTL2Q8WYA1 636 aa13.43□□□□□ -0.26
DDX56-206ENST00000446987 ACCSQ96QU6 501 aa13.43□□□□□ -0.26
DDX56-206ENST00000446987 CBWD1Q9BRT8 395 aa13.43□□□□□ -0.26
DDX56-206ENST00000446987 CCDC68Q9H2F9 335 aa13.43□□□□□ -0.26
DDX56-206ENST00000446987 PRDM12Q9H4Q4 367 aa13.43□□□□□ -0.26
DDX56-206ENST00000446987 KCNK13Q9HB14 408 aa13.43□□□□□ -0.26
DDX56-206ENST00000446987 GIN1Q9NXP7 522 aa13.43□□□□□ -0.26
DDX56-206ENST00000446987 CACNG4Q9UBN1 327 aa13.43□□□□□ -0.26
DDX56-206ENST00000446987 PCDHB13Q9Y5F0 798 aa13.43□□□□□ -0.26
DDX56-206ENST00000446987 SPO11Q9Y5K1 396 aa13.43□□□□□ -0.26
DDX56-206ENST00000446987 UBE4BO95155 1302 aa13.43□□□□□ -0.26
DDX56-206ENST00000446987 KLF11O14901 512 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 FSCN2O14926 492 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 CLDN3O15551 220 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 POMCP01189 267 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 ZNF23P17027 643 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 RPA3P35244 121 aaPredicted RBP13.42□□□□□ -0.26
DDX56-206ENST00000446987 BMPR1AP36894 532 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 WNT7BP56706 349 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 OSTNP61366 133 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 PSMC1P62191 440 aaKnown RBP13.42□□□□□ -0.26
DDX56-206ENST00000446987 KRT17Q04695 432 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 SLC1A5Q15758 541 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 DCDC5Q6ZRR9 648 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 LRRC49Q8IUZ0 686 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 ABI1Q8IZP0 508 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 DDHD1Q8NEL9 900 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 CD101Q93033 1021 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 LRGUKQ96M69 825 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 SH3GL1Q99961 368 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 HEPHQ9BQS7 1158 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 TMEM120AQ9BXJ8 343 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 MRPL1Q9BYD6 325 aaKnown RBP13.42□□□□□ -0.26
DDX56-206ENST00000446987 KIAA1586Q9HCI6 787 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 KCNK4Q9NYG8 393 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 TBK1Q9UHD2 729 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 CDH7Q9ULB5 785 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 CARD8Q9Y2G2 431 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 F8W810 466 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 OGTO15294 1046 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 C8BP07358 591 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 DLDP09622 509 aaKnown RBP13.42□□□□□ -0.26
DDX56-206ENST00000446987 CXCL8P10145 99 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 HMOX2P30519 316 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 CTNNB1P35222 781 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 ALDH3B2P48448 385 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 CAMK1Q14012 370 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 SLC10A6Q3KNW5 377 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 FBXL19Q6PCT2 694 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 LVRNQ6Q4G3 990 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 RBM15BQ8NDT2 890 aaKnown RBP13.42□□□□□ -0.26
DDX56-206ENST00000446987 SRPK1Q96SB4 655 aaKnown RBP13.42□□□□□ -0.26
DDX56-206ENST00000446987 OLFM1Q99784 485 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 MRPL9Q9BYD2 267 aaKnown RBP13.42□□□□□ -0.26
DDX56-206ENST00000446987 KCTD10Q9H3F6 313 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 SIX2Q9NPC8 291 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 C6orf203Q9P0P8 240 aaPredicted RBP13.42□□□□□ -0.26
DDX56-206ENST00000446987 ANAPC5Q9UJX4 755 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 CPSF3Q9UKF6 684 aaKnown RBP13.42□□□□□ -0.26
DDX56-206ENST00000446987 EXOC7Q9UPT5 735 aa13.42□□□□□ -0.26
DDX56-206ENST00000446987 VWA8A3KMH1 1905 aa13.41□□□□□ -0.26
DDX56-206ENST00000446987 MYO7AQ13402 2215 aa13.41□□□□□ -0.26
DDX56-206ENST00000446987 PRRC2BQ5JSZ5 2229 aaKnown RBP13.41□□□□□ -0.26
DDX56-206ENST00000446987 ADRB2P07550 413 aa13.41□□□□□ -0.26
DDX56-206ENST00000446987 OCM2P0CE71 109 aa13.41□□□□□ -0.26
DDX56-206ENST00000446987 OCMP0CE72 109 aaPredicted RBP13.41□□□□□ -0.26
DDX56-206ENST00000446987 ATF2P15336 505 aa13.41□□□□□ -0.26
DDX56-206ENST00000446987 DNAJB1P25685 340 aa13.41□□□□□ -0.26
DDX56-206ENST00000446987 GCAP28676 217 aa13.41□□□□□ -0.26
DDX56-206ENST00000446987 PRDX6P30041 224 aa13.41□□□□□ -0.26
DDX56-206ENST00000446987 SLC11A1P49279 550 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms