RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 KCNK1O00180 336 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 MSI1O43347 362 aaKnown RBP16.07■□□□□ 0.16
SNX13-204ENST00000444712 FAM155BO75949 473 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 MT-ND3P03897 115 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 PGAM1P18669 254 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 CNTFP26441 200 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 GPR15P49685 360 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 ATN1P54259 1190 aaPredicted RBP16.07■□□□□ 0.16
SNX13-204ENST00000444712 SEPT7Q16181 437 aaKnown RBP16.07■□□□□ 0.16
SNX13-204ENST00000444712 ZNF449Q6P9G9 518 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 YTHDF3Q7Z739 585 aaKnown RBP16.07■□□□□ 0.16
SNX13-204ENST00000444712 CTAGE3PQ8IX95 158 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 MZB1Q8WU39 189 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 CDKL2Q92772 493 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 SEC16BQ96JE7 1060 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 PPP1R12CQ9BZL4 782 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 NEU3Q9UQ49 428 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 LTBP2Q14767 1821 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 DOCK4Q8N1I0 1966 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 FAM159BA6NKW6 160 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 E9PAM4 449 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 TYROBPO43914 113 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 KRT38O76015 456 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 KRT4P19013 534 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 KPNA1P52294 538 aaPredicted RBP16.07■□□□□ 0.16
SNX13-204ENST00000444712 HTRA3P83110 453 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 MPP2Q14168 576 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 TRIP4Q15650 581 aaPredicted RBP16.07■□□□□ 0.16
SNX13-204ENST00000444712 TCTN1Q2MV58 587 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 USP41Q3LFD5 358 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 RTP2Q5QGT7 225 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 SDHAF4Q5VUM1 108 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 SRLQ86TD4 932 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 LRRC34Q8IZ02 419 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 C4orf33Q8N1A6 199 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 PPM1NQ8N819 430 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 TTC17Q96AE7 1141 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 CABS1Q96KC9 395 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 TEKT5Q96M29 485 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 SEPT5Q99719 369 aaPredicted RBP16.07■□□□□ 0.16
SNX13-204ENST00000444712 CRISPLD2Q9H0B8 497 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 NR2E3Q9Y5X4 410 aa16.07■□□□□ 0.16
SNX13-204ENST00000444712 GOLGA6L7A0A1B0GV03 622 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 FOXO6A8MYZ6 492 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 SPAG7O75391 227 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 ASMTLO95671 621 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 MYCP01106 439 aaPredicted RBP16.06■□□□□ 0.16
SNX13-204ENST00000444712 SNRPAP09012 282 aaKnown RBP16.06■□□□□ 0.16
SNX13-204ENST00000444712 MLLT6P55198 1093 aaPredicted RBP16.06■□□□□ 0.16
SNX13-204ENST00000444712 TLE2Q04725 743 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 CASC4Q6P4E1 433 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 TP53INP2Q8IXH6 220 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 RTL3Q8N8U3 475 aaKnown RBP16.06■□□□□ 0.16
SNX13-204ENST00000444712 NETO2Q8NC67 525 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 CCDC197Q8NCU1 140 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 DENND1AQ8TEH3 1009 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 BTN2A3PQ96KV6 586 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 TGS1Q96RS0 853 aaKnown RBP16.06■□□□□ 0.16
SNX13-204ENST00000444712 CEP41Q9BYV8 373 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 LRRC40Q9H9A6 602 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.06■□□□□ 0.16
SNX13-204ENST00000444712 OSER1Q9NX31 292 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 PPARGC1AQ9UBK2 798 aaKnown RBP16.06■□□□□ 0.16
SNX13-204ENST00000444712 MTRRQ9UBK8 725 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 RRP15Q9Y3B9 282 aaKnown RBP16.06■□□□□ 0.16
SNX13-204ENST00000444712 BACE2Q9Y5Z0 518 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 HS3ST4Q9Y661 456 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 FAM169AQ9Y6X4 670 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 PCNTO95613 3336 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 A0A1W2PPM1 405 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 ARHGAP42A6NI28 874 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 ZBTB24O43167 697 aaPredicted RBP16.06■□□□□ 0.16
SNX13-204ENST00000444712 ALDH1A2O94788 518 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 C1QAP02745 245 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 TUFMP49411 452 aaKnown RBP16.06■□□□□ 0.16
SNX13-204ENST00000444712 TUBP50607 506 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 USP46P62068 366 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 RING1Q06587 406 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 ITIH4Q14624 930 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 QPCTQ16769 361 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 ANO4Q32M45 955 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 TRIM60Q495X7 471 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 HHATQ5VTY9 493 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 SLC8B1Q6J4K2 584 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 RNF19BQ6ZMZ0 732 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 DEFB128Q7Z7B8 93 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 LINC00523Q86TU6 105 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 GDAP1Q8TB36 358 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 GRAMD1AQ96CP6 724 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 MOCS1Q9NZB8 636 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 BFARQ9NZS9 450 aa16.06■□□□□ 0.16
SNX13-204ENST00000444712 AAR2Q9Y312 384 aaKnown RBP16.06■□□□□ 0.16
SNX13-204ENST00000444712 TCP11X1B4DZS4 312 aa16.05■□□□□ 0.16
SNX13-204ENST00000444712 NT5C1B-RDH14C9J2C7 533 aa16.05■□□□□ 0.16
SNX13-204ENST00000444712 DFFAO00273 331 aa16.05■□□□□ 0.16
SNX13-204ENST00000444712 MOCS2O96007 188 aaPredicted RBP16.05■□□□□ 0.16
SNX13-204ENST00000444712 POLBP06746 335 aa16.05■□□□□ 0.16
SNX13-204ENST00000444712 GRIA1P42261 906 aa16.05■□□□□ 0.16
SNX13-204ENST00000444712 PGFP49763 221 aa16.05■□□□□ 0.16
SNX13-204ENST00000444712 SPANXN3Q5MJ09 141 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms