RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 NPY2RP49146 381 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 GPR15P49685 360 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 YBEYP58557 167 aaPredicted RBP6.18□□□□□ -1.42
VPS50-205ENST00000441602 SLC10A2Q12908 348 aaPredicted RBP6.18□□□□□ -1.42
VPS50-205ENST00000441602 RAB33AQ14088 237 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 LRRC26Q2I0M4 334 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 FAXCQ5TGI0 409 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 TMCO4Q5TGY1 634 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 ARMC3Q5W041 872 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 LRRC8BQ6P9F7 803 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 CAPN12Q6ZSI9 719 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 TAX1BP1Q86VP1 789 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 SPATS2Q86XZ4 545 aaKnown RBP6.18□□□□□ -1.42
VPS50-205ENST00000441602 CTAGE3PQ8IX95 158 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 CRIPAKQ8N1N5 446 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 LGMNQ99538 433 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 ADAM33Q9BZ11 813 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 FAM107BQ9H098 131 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 GBA3Q9H227 469 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 SP110Q9HB58 689 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 PRDM10Q9NQV6 1147 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 TXNDC16Q9P2K2 825 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 YIPF1Q9Y548 306 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 RASA4BC9J798 803 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 C2CD2LO14523 706 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 MSI1O43347 362 aaKnown RBP6.18□□□□□ -1.42
VPS50-205ENST00000441602 RASA4O43374 803 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 KRT38O76015 456 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 MT-ND3P03897 115 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 VAV1P15498 845 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 CSF2RAP15509 400 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 ETFBP38117 255 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 MNX1P50219 401 aaPredicted RBP6.18□□□□□ -1.42
VPS50-205ENST00000441602 IRAK1P51617 712 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 TCTN1Q2MV58 587 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 TEX44Q53QW1 395 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 KLHDC10Q6PID8 442 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 B4GALNT4Q76KP1 1039 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 MIB1Q86YT6 1006 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 HERC6Q8IVU3 1022 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 GSDMBQ8TAX9 411 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 FBF1Q8TES7 1133 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 SLC39A13Q96H72 371 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 SGSM3Q96HU1 749 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 B3GALT6Q96L58 329 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 PWWP2AQ96N64 755 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 RPRD1AQ96P16 312 aaPredicted RBP6.18□□□□□ -1.42
VPS50-205ENST00000441602 EBNA1BP2Q99848 306 aaKnown RBP6.18□□□□□ -1.42
VPS50-205ENST00000441602 EMILIN2Q9BXX0 1053 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 LRRC4CQ9HCJ2 640 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 FAM169AQ9Y6X4 670 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 MAGEB16A2A368 324 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 WDR27A2RRH5 827 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 JCHAINP01591 159 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 BRAFP15056 766 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 PGAM1P18669 254 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 PTPN3P26045 913 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 CNTFP26441 200 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 PSMB4P28070 264 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 IFI35P80217 286 aaPredicted RBP6.18□□□□□ -1.42
VPS50-205ENST00000441602 FPGSQ05932 587 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 FNBP1LQ5T0N5 605 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 ZNF567Q8N184 647 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 DNAAF3Q8N9W5 541 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 ZNF689Q96CS4 500 aaPredicted RBP6.18□□□□□ -1.42
VPS50-205ENST00000441602 TRMT2BQ96GJ1 504 aaKnown RBP6.18□□□□□ -1.42
VPS50-205ENST00000441602 XPO6Q96QU8 1125 aaKnown RBP6.18□□□□□ -1.42
VPS50-205ENST00000441602 IQCGQ9H095 443 aaKnown RBP6.18□□□□□ -1.42
VPS50-205ENST00000441602 TRABDQ9H4I3 376 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 TMPRSS4Q9NRS4 437 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 CALCOCO1Q9P1Z2 691 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 LSM7Q9UK45 103 aaKnown RBP6.18□□□□□ -1.42
VPS50-205ENST00000441602 HS3ST4Q9Y661 456 aa6.18□□□□□ -1.42
VPS50-205ENST00000441602 MRPL42Q9Y6G3 142 aaKnown RBP6.18□□□□□ -1.42
VPS50-205ENST00000441602 FAM72CH0Y354 149 aa6.17□□□□□ -1.42
VPS50-205ENST00000441602 NDUFAB1O14561 156 aa6.17□□□□□ -1.42
VPS50-205ENST00000441602 TP73O15350 636 aa6.17□□□□□ -1.42
VPS50-205ENST00000441602 METTL18O95568 372 aa6.17□□□□□ -1.42
VPS50-205ENST00000441602 AP2A1O95782 977 aa6.17□□□□□ -1.42
VPS50-205ENST00000441602 LRG1P02750 347 aa6.17□□□□□ -1.42
VPS50-205ENST00000441602 HMBSP08397 361 aa6.17□□□□□ -1.42
VPS50-205ENST00000441602 ZDHHC11BP0C7U3 371 aa6.17□□□□□ -1.42
VPS50-205ENST00000441602 TACR2P21452 398 aa6.17□□□□□ -1.42
VPS50-205ENST00000441602 PBX3P40426 434 aa6.17□□□□□ -1.42
VPS50-205ENST00000441602 RENBPP51606 427 aa6.17□□□□□ -1.42
VPS50-205ENST00000441602 C1QTNF8P60827 252 aa6.17□□□□□ -1.42
VPS50-205ENST00000441602 IL9RQ01113 521 aa6.17□□□□□ -1.42
VPS50-205ENST00000441602 PARP15Q460N3 678 aa6.17□□□□□ -1.42
VPS50-205ENST00000441602 SPANXN3Q5MJ09 141 aa6.17□□□□□ -1.42
VPS50-205ENST00000441602 FAM72AQ5TYM5 149 aa6.17□□□□□ -1.42
VPS50-205ENST00000441602 MANEALQ5VSG8 457 aa6.17□□□□□ -1.42
VPS50-205ENST00000441602 HHATQ5VTY9 493 aa6.17□□□□□ -1.42
VPS50-205ENST00000441602 FAM72DQ6L9T8 149 aa6.17□□□□□ -1.42
VPS50-205ENST00000441602 FAM72BQ86X60 149 aa6.17□□□□□ -1.42
VPS50-205ENST00000441602 RNF168Q8IYW5 571 aaPredicted RBP6.17□□□□□ -1.42
VPS50-205ENST00000441602 MRPS31Q92665 395 aaKnown RBP6.17□□□□□ -1.42
VPS50-205ENST00000441602 AZIN2Q96A70 460 aa6.17□□□□□ -1.42
VPS50-205ENST00000441602 MTBPQ96DY7 904 aa6.17□□□□□ -1.42
VPS50-205ENST00000441602 EPN3Q9H201 632 aa6.17□□□□□ -1.42
VPS50-205ENST00000441602 NSMCE4AQ9NXX6 385 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms