RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, human

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN4-205	ENST00000433888	KRCC1	Q9NPI7	259 aa	Predicted RBP	4.22	□□□□□ -1.73
PTPN4-205	ENST00000433888	FBXO28	Q9NVF7	368 aa		4.22	□□□□□ -1.73
PTPN4-205	ENST00000433888	RGL1	Q9NZL6	768 aa		4.22	□□□□□ -1.73
PTPN4-205	ENST00000433888	PLEKHB1	Q9UF11	243 aa	Predicted RBP	4.22	□□□□□ -1.73
PTPN4-205	ENST00000433888	DTNA	Q9Y4J8	743 aa		4.22	□□□□□ -1.73
PTPN4-205	ENST00000433888	PCDHB7	Q9Y5E2	793 aa		4.22	□□□□□ -1.73
PTPN4-205	ENST00000433888	PDLIM4	P50479	330 aa		4.21	□□□□□ -1.74
PTPN4-205	ENST00000433888	POLE2	P56282	527 aa		4.21	□□□□□ -1.74
PTPN4-205	ENST00000433888	ENTPD8	Q5MY95	495 aa		4.21	□□□□□ -1.74
PTPN4-205	ENST00000433888	WDR93	Q6P2C0	686 aa		4.21	□□□□□ -1.74
PTPN4-205	ENST00000433888	KDM1B	Q8NB78	822 aa		4.21	□□□□□ -1.74
PTPN4-205	ENST00000433888	GABPB2	Q8TAK5	448 aa	Predicted RBP	4.21	□□□□□ -1.74
PTPN4-205	ENST00000433888	TIFA	Q96CG3	184 aa		4.21	□□□□□ -1.74
PTPN4-205	ENST00000433888	MCRS1	Q96EZ8	462 aa		4.21	□□□□□ -1.74
PTPN4-205	ENST00000433888	WDR77	Q9BQA1	342 aa	Predicted RBP	4.21	□□□□□ -1.74
PTPN4-205	ENST00000433888	C6orf106	Q9H6K1	298 aa	Predicted RBP	4.21	□□□□□ -1.74
PTPN4-205	ENST00000433888	TCEAL9	Q9UHQ7	104 aa		4.21	□□□□□ -1.74
PTPN4-205	ENST00000433888	SLC8A2	Q9UPR5	921 aa		4.21	□□□□□ -1.74
PTPN4-205	ENST00000433888	CXorf65	A6NEN9	183 aa		4.2	□□□□□ -1.74
PTPN4-205	ENST00000433888	KCNJ18	B7U540	433 aa		4.2	□□□□□ -1.74
PTPN4-205	ENST00000433888		I6L893	689 aa	Predicted RBP	4.2	□□□□□ -1.74
PTPN4-205	ENST00000433888		J3KTA2	159 aa		4.2	□□□□□ -1.74
PTPN4-205	ENST00000433888		M0QYT0	321 aa		4.2	□□□□□ -1.74
PTPN4-205	ENST00000433888	APOL1	O14791	398 aa		4.2	□□□□□ -1.74
PTPN4-205	ENST00000433888	NKX2-8	O15522	239 aa		4.2	□□□□□ -1.74
PTPN4-205	ENST00000433888	CYP1A2	P05177	515 aa		4.2	□□□□□ -1.74
PTPN4-205	ENST00000433888	LCK	P06239	509 aa		4.2	□□□□□ -1.74
PTPN4-205	ENST00000433888	SRGAP2B	P0DMP2	458 aa		4.2	□□□□□ -1.74
PTPN4-205	ENST00000433888	KRT10	P13645	584 aa		4.2	□□□□□ -1.74
PTPN4-205	ENST00000433888	SLC5A1	P13866	664 aa		4.2	□□□□□ -1.74
PTPN4-205	ENST00000433888	PKM	P14618	531 aa	Known RBP	4.2	□□□□□ -1.74
PTPN4-205	ENST00000433888	IDE	P14735	1019 aa		4.2	□□□□□ -1.74
PTPN4-205	ENST00000433888	SELENOV	P59797	346 aa		4.2	□□□□□ -1.74
PTPN4-205	ENST00000433888	PMPCA	Q10713	525 aa		4.2	□□□□□ -1.74
PTPN4-205	ENST00000433888	MDGA2	Q7Z553	956 aa		4.2	□□□□□ -1.74
PTPN4-205	ENST00000433888	ZNF329	Q86UD4	541 aa		4.2	□□□□□ -1.74
PTPN4-205	ENST00000433888	TMPRSS12	Q86WS5	348 aa		4.2	□□□□□ -1.74
PTPN4-205	ENST00000433888	FAR2	Q96K12	515 aa		4.2	□□□□□ -1.74
PTPN4-205	ENST00000433888	TM6SF1	Q9BZW5	370 aa		4.2	□□□□□ -1.74
PTPN4-205	ENST00000433888	PLSCR4	Q9NRQ2	329 aa		4.2	□□□□□ -1.74
PTPN4-205	ENST00000433888	DTX4	Q9Y2E6	619 aa		4.2	□□□□□ -1.74
PTPN4-205	ENST00000433888	PNMA6E	A0A0J9YXQ4	647 aa		4.19	□□□□□ -1.74
PTPN4-205	ENST00000433888	PRSS47	A8MTI9	375 aa		4.19	□□□□□ -1.74
PTPN4-205	ENST00000433888	ALDOC	P09972	364 aa	Known RBP	4.19	□□□□□ -1.74
PTPN4-205	ENST00000433888	STT3A	P46977	705 aa		4.19	□□□□□ -1.74
PTPN4-205	ENST00000433888	PRIM2	P49643	509 aa		4.19	□□□□□ -1.74
PTPN4-205	ENST00000433888	ART1	P52961	327 aa		4.19	□□□□□ -1.74
PTPN4-205	ENST00000433888	FOXL2	P58012	376 aa		4.19	□□□□□ -1.74
PTPN4-205	ENST00000433888	KIF5A	Q12840	1032 aa		4.19	□□□□□ -1.74
PTPN4-205	ENST00000433888	CSHL1	Q14406	222 aa		4.19	□□□□□ -1.74
PTPN4-205	ENST00000433888	DUSP6	Q16828	381 aa		4.19	□□□□□ -1.74
PTPN4-205	ENST00000433888	AAK1	Q2M2I8	961 aa		4.19	□□□□□ -1.74
PTPN4-205	ENST00000433888	PRAMEF19	Q5SWL8	479 aa		4.19	□□□□□ -1.74
PTPN4-205	ENST00000433888	C10orf76	Q5T2E6	689 aa		4.19	□□□□□ -1.74
PTPN4-205	ENST00000433888	DCAF12L2	Q5VW00	463 aa		4.19	□□□□□ -1.74
PTPN4-205	ENST00000433888	RASGRP3	Q8IV61	690 aa		4.19	□□□□□ -1.74
PTPN4-205	ENST00000433888	CCDC33	Q8N5R6	958 aa		4.19	□□□□□ -1.74
PTPN4-205	ENST00000433888	ADPRHL1	Q8NDY3	354 aa		4.19	□□□□□ -1.74
PTPN4-205	ENST00000433888	ADAMTS14	Q8WXS8	1223 aa		4.19	□□□□□ -1.74
PTPN4-205	ENST00000433888	IP6K1	Q92551	441 aa		4.19	□□□□□ -1.74
PTPN4-205	ENST00000433888	EIF2A	Q9BY44	585 aa	Known RBP	4.19	□□□□□ -1.74
PTPN4-205	ENST00000433888	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	4.19	□□□□□ -1.74
PTPN4-205	ENST00000433888	CDT1	Q9H211	546 aa		4.19	□□□□□ -1.74
PTPN4-205	ENST00000433888	PNRC2	Q9NPJ4	139 aa	Known RBP	4.19	□□□□□ -1.74
PTPN4-205	ENST00000433888	CA14	Q9ULX7	337 aa		4.19	□□□□□ -1.74
PTPN4-205	ENST00000433888	FAM234B	A2RU67	622 aa		4.18	□□□□□ -1.74
PTPN4-205	ENST00000433888	NTSR2	O95665	410 aa		4.18	□□□□□ -1.74
PTPN4-205	ENST00000433888	GLUD1	P00367	558 aa		4.18	□□□□□ -1.74
PTPN4-205	ENST00000433888	PLG	P00747	810 aa	Predicted RBP	4.18	□□□□□ -1.74
PTPN4-205	ENST00000433888	GLUD2	P49448	558 aa		4.18	□□□□□ -1.74
PTPN4-205	ENST00000433888	COMP	P49747	757 aa	Predicted RBP	4.18	□□□□□ -1.74
PTPN4-205	ENST00000433888	KRTAP10-5	P60370	271 aa		4.18	□□□□□ -1.74
PTPN4-205	ENST00000433888	ERVFC1-1	P60608	527 aa		4.18	□□□□□ -1.74
PTPN4-205	ENST00000433888	TLE3	Q04726	772 aa		4.18	□□□□□ -1.74
PTPN4-205	ENST00000433888	GPR18	Q14330	331 aa		4.18	□□□□□ -1.74
PTPN4-205	ENST00000433888	ARL13B	Q3SXY8	428 aa		4.18	□□□□□ -1.74
PTPN4-205	ENST00000433888	FNBP1L	Q5T0N5	605 aa		4.18	□□□□□ -1.74
PTPN4-205	ENST00000433888	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	4.18	□□□□□ -1.74
PTPN4-205	ENST00000433888	C16orf82	Q7Z2V1	217 aa		4.18	□□□□□ -1.74
PTPN4-205	ENST00000433888	ARMC9	Q7Z3E5	817 aa		4.18	□□□□□ -1.74
PTPN4-205	ENST00000433888	CADM3	Q8N126	398 aa		4.18	□□□□□ -1.74
PTPN4-205	ENST00000433888	TTC17	Q96AE7	1141 aa		4.18	□□□□□ -1.74
PTPN4-205	ENST00000433888	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	4.18	□□□□□ -1.74
PTPN4-205	ENST00000433888	ZNF304	Q9HCX3	659 aa		4.18	□□□□□ -1.74
PTPN4-205	ENST00000433888	RNF146	Q9NTX7	359 aa		4.18	□□□□□ -1.74
PTPN4-205	ENST00000433888	TNFSF13B	Q9Y275	285 aa		4.18	□□□□□ -1.74
PTPN4-205	ENST00000433888	PCDHGB1	Q9Y5G3	927 aa		4.18	□□□□□ -1.74
PTPN4-205	ENST00000433888	CYP3A7-CYP3A51P	A0A087WV96	503 aa		4.17	□□□□□ -1.74
PTPN4-205	ENST00000433888	TRBV5-7	A0A0A0MS05	114 aa		4.17	□□□□□ -1.74
PTPN4-205	ENST00000433888	BTBD18	B2RXH4	712 aa		4.17	□□□□□ -1.74
PTPN4-205	ENST00000433888	ZNF432	O94892	652 aa		4.17	□□□□□ -1.74
PTPN4-205	ENST00000433888	CER1	O95813	267 aa		4.17	□□□□□ -1.74
PTPN4-205	ENST00000433888	CYP3A4	P08684	503 aa		4.17	□□□□□ -1.74
PTPN4-205	ENST00000433888	CYP3A7	P24462	503 aa		4.17	□□□□□ -1.74
PTPN4-205	ENST00000433888	SLC16A2	P36021	539 aa		4.17	□□□□□ -1.74
PTPN4-205	ENST00000433888	ADPRH	P54922	357 aa		4.17	□□□□□ -1.74
PTPN4-205	ENST00000433888	ZP1	P60852	638 aa		4.17	□□□□□ -1.74
PTPN4-205	ENST00000433888	GRM4	Q14833	912 aa		4.17	□□□□□ -1.74
PTPN4-205	ENST00000433888	KRTAP24-1	Q3LI83	254 aa		4.17	□□□□□ -1.74
PTPN4-205	ENST00000433888	HIBCH	Q6NVY1	386 aa	Predicted RBP	4.17	□□□□□ -1.74

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