RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 PPP6R3Q5H9R7 873 aaPredicted RBP15.98■□□□□ 0.15
TREX1-201ENST00000433541 FSCBQ5H9T9 825 aa15.98■□□□□ 0.15
TREX1-201ENST00000433541 DAB2IPQ5VWQ8 1189 aa15.98■□□□□ 0.15
TREX1-201ENST00000433541 SERPINA13PQ6UXR4 307 aa15.98■□□□□ 0.15
TREX1-201ENST00000433541 ZNF354CQ86Y25 554 aa15.98■□□□□ 0.15
TREX1-201ENST00000433541 RHOT2Q8IXI1 618 aa15.98■□□□□ 0.15
TREX1-201ENST00000433541 PYROXD2Q8N2H3 581 aa15.98■□□□□ 0.15
TREX1-201ENST00000433541 IL17RCQ8NAC3 791 aa15.98■□□□□ 0.15
TREX1-201ENST00000433541 TSTD1Q8NFU3 115 aa15.98■□□□□ 0.15
TREX1-201ENST00000433541 SLC35G2Q8TBE7 412 aa15.98■□□□□ 0.15
TREX1-201ENST00000433541 CYB5D2Q8WUJ1 264 aa15.98■□□□□ 0.15
TREX1-201ENST00000433541 HSPH1Q92598 858 aa15.98■□□□□ 0.15
TREX1-201ENST00000433541 HHIPQ96QV1 700 aa15.98■□□□□ 0.15
TREX1-201ENST00000433541 PPP1R9BQ96SB3 815 aa15.98■□□□□ 0.15
TREX1-201ENST00000433541 OSBPL2Q9H1P3 480 aa15.98■□□□□ 0.15
TREX1-201ENST00000433541 POLMQ9NP87 494 aaPredicted RBP15.98■□□□□ 0.15
TREX1-201ENST00000433541 CACNA2D2Q9NY47 1150 aa15.98■□□□□ 0.15
TREX1-201ENST00000433541 BCCIPQ9P287 314 aaKnown RBP eCLIP15.98■□□□□ 0.15
TREX1-201ENST00000433541 LCMT1Q9UIC8 334 aa15.98■□□□□ 0.15
TREX1-201ENST00000433541 VPS28Q9UK41 221 aa15.98■□□□□ 0.15
TREX1-201ENST00000433541 MMP17Q9ULZ9 603 aa15.98■□□□□ 0.15
TREX1-201ENST00000433541 USP18Q9UMW8 372 aa15.98■□□□□ 0.15
TREX1-201ENST00000433541 A0A0A0MRY4 1105 aa15.97■□□□□ 0.15
TREX1-201ENST00000433541 CHURC1-FNTBB4DL54 471 aa15.97■□□□□ 0.15
TREX1-201ENST00000433541 EIF3CLB5ME19 914 aaKnown RBP15.97■□□□□ 0.15
TREX1-201ENST00000433541 DAPK3O43293 454 aa15.97■□□□□ 0.15
TREX1-201ENST00000433541 TIMM44O43615 452 aa15.97■□□□□ 0.15
TREX1-201ENST00000433541 NRDCO43847 1150 aa15.97■□□□□ 0.15
TREX1-201ENST00000433541 LRCH4O75427 683 aa15.97■□□□□ 0.15
TREX1-201ENST00000433541 NDUFA10O95299 355 aa15.97■□□□□ 0.15
TREX1-201ENST00000433541 EPHB2P29323 1055 aa15.97■□□□□ 0.15
TREX1-201ENST00000433541 NTSR1P30989 418 aa15.97■□□□□ 0.15
TREX1-201ENST00000433541 CSKP41240 450 aa15.97■□□□□ 0.15
TREX1-201ENST00000433541 NAP1L1P55209 391 aaKnown RBP15.97■□□□□ 0.15
TREX1-201ENST00000433541 TPI1P60174 286 aa15.97■□□□□ 0.15
TREX1-201ENST00000433541 SCAPQ12770 1279 aa15.97■□□□□ 0.15
TREX1-201ENST00000433541 MESDQ14696 234 aa15.97■□□□□ 0.15
TREX1-201ENST00000433541 STARD3Q14849 445 aa15.97■□□□□ 0.15
TREX1-201ENST00000433541 HADHQ16836 314 aaKnown RBP15.97■□□□□ 0.15
TREX1-201ENST00000433541 SMTNL2Q2TAL5 461 aa15.97■□□□□ 0.15
TREX1-201ENST00000433541 ALFQ53S48 1182 aa15.97■□□□□ 0.15
TREX1-201ENST00000433541 PITRM1Q5JRX3 1037 aa15.97■□□□□ 0.15
TREX1-201ENST00000433541 C6orf118Q5T5N4 469 aa15.97■□□□□ 0.15
TREX1-201ENST00000433541 ERMARDQ5T6L9 678 aa15.97■□□□□ 0.15
TREX1-201ENST00000433541 SYT13Q7L8C5 426 aa15.97■□□□□ 0.15
TREX1-201ENST00000433541 KIAA1328Q86T90 577 aa15.97■□□□□ 0.15
TREX1-201ENST00000433541 PGBD3Q8N328 593 aa15.97■□□□□ 0.15
TREX1-201ENST00000433541 PRSS33Q8NF86 280 aa15.97■□□□□ 0.15
TREX1-201ENST00000433541 KCNV2Q8TDN2 545 aa15.97■□□□□ 0.15
TREX1-201ENST00000433541 RFFLQ8WZ73 363 aa15.97■□□□□ 0.15
TREX1-201ENST00000433541 ATOH1Q92858 354 aaPredicted RBP15.97■□□□□ 0.15
TREX1-201ENST00000433541 EIF3CQ99613 913 aaKnown RBP15.97■□□□□ 0.15
TREX1-201ENST00000433541 SNRNP25Q9BV90 132 aaKnown RBP15.97■□□□□ 0.15
TREX1-201ENST00000433541 IRF2BPLQ9H1B7 796 aa15.97■□□□□ 0.15
TREX1-201ENST00000433541 KCNH6Q9H252 994 aa15.97■□□□□ 0.15
TREX1-201ENST00000433541 OSGEPQ9NPF4 335 aa15.97■□□□□ 0.15
TREX1-201ENST00000433541 POLR3BQ9NW08 1133 aaPredicted RBP15.97■□□□□ 0.15
TREX1-201ENST00000433541 RAPGEFL1Q9UHV5 662 aa15.97■□□□□ 0.15
TREX1-201ENST00000433541 FBXO4Q9UKT5 387 aa15.97■□□□□ 0.15
TREX1-201ENST00000433541 INTUQ9ULD6 942 aa15.97■□□□□ 0.15
TREX1-201ENST00000433541 PCDHA13Q9Y5I0 950 aa15.97■□□□□ 0.15
TREX1-201ENST00000433541 EPN1Q9Y6I3 576 aaPredicted RBP15.97■□□□□ 0.15
TREX1-201ENST00000433541 FAM72CH0Y354 149 aa15.96■□□□□ 0.15
TREX1-201ENST00000433541 SGK1O00141 431 aa15.96■□□□□ 0.15
TREX1-201ENST00000433541 SYNCRIPO60506 623 aaKnown RBP15.96■□□□□ 0.15
TREX1-201ENST00000433541 ALDH1A2O94788 518 aa15.96■□□□□ 0.15
TREX1-201ENST00000433541 LRIG2O94898 1065 aa15.96■□□□□ 0.15
TREX1-201ENST00000433541 PCK1P35558 622 aa15.96■□□□□ 0.15
TREX1-201ENST00000433541 NNMTP40261 264 aa15.96■□□□□ 0.15
TREX1-201ENST00000433541 PXNP49023 591 aaPredicted RBP15.96■□□□□ 0.15
TREX1-201ENST00000433541 NRLP54845 237 aa15.96■□□□□ 0.15
TREX1-201ENST00000433541 SLC12A1Q13621 1099 aa15.96■□□□□ 0.15
TREX1-201ENST00000433541 ZNF234Q14588 700 aa15.96■□□□□ 0.15
TREX1-201ENST00000433541 FAM72AQ5TYM5 149 aa15.96■□□□□ 0.15
TREX1-201ENST00000433541 FAM72DQ6L9T8 149 aa15.96■□□□□ 0.15
TREX1-201ENST00000433541 FAM72BQ86X60 149 aa15.96■□□□□ 0.15
TREX1-201ENST00000433541 ACOX2Q99424 681 aa15.96■□□□□ 0.15
TREX1-201ENST00000433541 MAGEB5Q9BZ81 275 aa15.96■□□□□ 0.15
TREX1-201ENST00000433541 PRMT8Q9NR22 394 aaPredicted RBP15.96■□□□□ 0.15
TREX1-201ENST00000433541 C2orf42Q9NWW7 574 aa15.96■□□□□ 0.15
TREX1-201ENST00000433541 PPARGC1AQ9UBK2 798 aaKnown RBP15.96■□□□□ 0.15
TREX1-201ENST00000433541 SLC25A13Q9UJS0 675 aa15.96■□□□□ 0.15
TREX1-201ENST00000433541 STARD13Q9Y3M8 1113 aa15.96■□□□□ 0.15
TREX1-201ENST00000433541 STON1Q9Y6Q2 735 aa15.96■□□□□ 0.15
TREX1-201ENST00000433541 WDFY4Q6ZS81 3184 aa15.95■□□□□ 0.14
TREX1-201ENST00000433541 IGLV3-10A0A075B6K4 115 aa15.95■□□□□ 0.14
TREX1-201ENST00000433541 TCRBV21S2A2A0A5A6 115 aa15.95■□□□□ 0.14
TREX1-201ENST00000433541 DRGXA6NNA5 263 aa15.95■□□□□ 0.14
TREX1-201ENST00000433541 EEF2KO00418 725 aaKnown RBP15.95■□□□□ 0.14
TREX1-201ENST00000433541 NPC1O15118 1278 aa15.95■□□□□ 0.14
TREX1-201ENST00000433541 PROSCO94903 275 aa15.95■□□□□ 0.14
TREX1-201ENST00000433541 APBB3O95704 486 aa15.95■□□□□ 0.14
TREX1-201ENST00000433541 ASLP04424 464 aa15.95■□□□□ 0.14
TREX1-201ENST00000433541 EPHX1P07099 455 aa15.95■□□□□ 0.14
TREX1-201ENST00000433541 DLDP09622 509 aaKnown RBP15.95■□□□□ 0.14
TREX1-201ENST00000433541 SP9P0CG40 484 aa15.95■□□□□ 0.14
TREX1-201ENST00000433541 MZF1P28698 734 aaPredicted RBP15.95■□□□□ 0.14
TREX1-201ENST00000433541 L1CAMP32004 1257 aa15.95■□□□□ 0.14
TREX1-201ENST00000433541 ARL4AP40617 200 aa15.95■□□□□ 0.14
TREX1-201ENST00000433541 DGKEP52429 567 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms