RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 BEX4Q9NWD9 120 aaPredicted RBP6.52□□□□□ -1.37
USP54-206ENST00000433394 SYBUQ9NX95 663 aa6.52□□□□□ -1.37
USP54-206ENST00000433394 GAR1Q9NY12 217 aaKnown RBP6.52□□□□□ -1.37
USP54-206ENST00000433394 MTMR4Q9NYA4 1195 aa6.52□□□□□ -1.37
USP54-206ENST00000433394 B3GNT3Q9Y2A9 372 aa6.52□□□□□ -1.37
USP54-206ENST00000433394 TMEM247A6NEH6 219 aa6.51□□□□□ -1.37
USP54-206ENST00000433394 GAGE10A6NGK3 116 aa6.51□□□□□ -1.37
USP54-206ENST00000433394 H7C1Q1 480 aa6.51□□□□□ -1.37
USP54-206ENST00000433394 STRNO43815 780 aa6.51□□□□□ -1.37
USP54-206ENST00000433394 TIPRLO75663 272 aa6.51□□□□□ -1.37
USP54-206ENST00000433394 ALDOCP09972 364 aaKnown RBP6.51□□□□□ -1.37
USP54-206ENST00000433394 APEHP13798 732 aaKnown RBP6.51□□□□□ -1.37
USP54-206ENST00000433394 PKMP14618 531 aaKnown RBP6.51□□□□□ -1.37
USP54-206ENST00000433394 HOXB9P17482 250 aaPredicted RBP6.51□□□□□ -1.37
USP54-206ENST00000433394 TGM2P21980 687 aa6.51□□□□□ -1.37
USP54-206ENST00000433394 STAT6P42226 847 aa6.51□□□□□ -1.37
USP54-206ENST00000433394 ZNF169Q14929 603 aaPredicted RBP6.51□□□□□ -1.37
USP54-206ENST00000433394 LARS2Q15031 903 aaKnown RBP6.51□□□□□ -1.37
USP54-206ENST00000433394 BCDIN3DQ7Z5W3 292 aaKnown RBP6.51□□□□□ -1.37
USP54-206ENST00000433394 GALNT7Q86SF2 657 aa6.51□□□□□ -1.37
USP54-206ENST00000433394 LINC01465Q8N7H1 131 aa6.51□□□□□ -1.37
USP54-206ENST00000433394 SAAL1Q96ER3 474 aa6.51□□□□□ -1.37
USP54-206ENST00000433394 ZNF845Q96IR2 970 aaPredicted RBP6.51□□□□□ -1.37
USP54-206ENST00000433394 C5orf34Q96MH7 638 aa6.51□□□□□ -1.37
USP54-206ENST00000433394 ERVK-5Q9HDB9 667 aa6.51□□□□□ -1.37
USP54-206ENST00000433394 ALG13Q9NP73 1137 aaKnown RBP6.51□□□□□ -1.37
USP54-206ENST00000433394 TAS2R10Q9NYW0 307 aa6.51□□□□□ -1.37
USP54-206ENST00000433394 HCN3Q9P1Z3 774 aa6.51□□□□□ -1.37
USP54-206ENST00000433394 SLC17A6Q9P2U8 582 aa6.51□□□□□ -1.37
USP54-206ENST00000433394 CD207Q9UJ71 328 aa6.51□□□□□ -1.37
USP54-206ENST00000433394 SLC8A2Q9UPR5 921 aa6.51□□□□□ -1.37
USP54-206ENST00000433394 TDRD9Q8NDG6 1382 aaKnown RBP6.5□□□□□ -1.37
USP54-206ENST00000433394 H3BNC9 293 aa6.5□□□□□ -1.37
USP54-206ENST00000433394 RNASEH2AO75792 299 aaKnown RBP6.5□□□□□ -1.37
USP54-206ENST00000433394 HLA-DQA2P01906 255 aa6.5□□□□□ -1.37
USP54-206ENST00000433394 HNRNPCP07910 306 aaKnown RBP eCLIP6.5□□□□□ -1.37
USP54-206ENST00000433394 GGT5P36269 586 aa6.5□□□□□ -1.37
USP54-206ENST00000433394 ARL3P36405 182 aa6.5□□□□□ -1.37
USP54-206ENST00000433394 CYP4F2P78329 520 aa6.5□□□□□ -1.37
USP54-206ENST00000433394 ABHD18Q0P651 414 aa6.5□□□□□ -1.37
USP54-206ENST00000433394 FOXD4Q12950 439 aaPredicted RBP6.5□□□□□ -1.37
USP54-206ENST00000433394 BYSLQ13895 437 aaKnown RBP6.5□□□□□ -1.37
USP54-206ENST00000433394 TSTQ16762 297 aaKnown RBP6.5□□□□□ -1.37
USP54-206ENST00000433394 ANXA2RQ3ZCQ2 193 aa6.5□□□□□ -1.37
USP54-206ENST00000433394 HECTD2Q5U5R9 776 aa6.5□□□□□ -1.37
USP54-206ENST00000433394 CFAP161Q6P656 301 aa6.5□□□□□ -1.37
USP54-206ENST00000433394 KIAA1324Q6UXG2 1013 aaKnown RBP6.5□□□□□ -1.37
USP54-206ENST00000433394 SPRED1Q7Z699 444 aa6.5□□□□□ -1.37
USP54-206ENST00000433394 VPS52Q8N1B4 723 aa6.5□□□□□ -1.37
USP54-206ENST00000433394 CCDC89Q8N998 374 aa6.5□□□□□ -1.37
USP54-206ENST00000433394 KAT2BQ92831 832 aa6.5□□□□□ -1.37
USP54-206ENST00000433394 RNFT2Q96EX2 444 aa6.5□□□□□ -1.37
USP54-206ENST00000433394 PDLIM2Q96JY6 352 aa6.5□□□□□ -1.37
USP54-206ENST00000433394 GPR78Q96P69 363 aa6.5□□□□□ -1.37
USP54-206ENST00000433394 TREX2Q9BQ50 279 aaPredicted RBP6.5□□□□□ -1.37
USP54-206ENST00000433394 OSBPL5Q9H0X9 879 aaPredicted RBP6.5□□□□□ -1.37
USP54-206ENST00000433394 TTC12Q9H892 705 aaPredicted RBP6.5□□□□□ -1.37
USP54-206ENST00000433394 SH3BP4Q9P0V3 963 aa6.5□□□□□ -1.37
USP54-206ENST00000433394 IPO11Q9UI26 975 aaKnown RBP6.5□□□□□ -1.37
USP54-206ENST00000433394 DHDHQ9UQ10 334 aa6.5□□□□□ -1.37
USP54-206ENST00000433394 CAMK2AQ9UQM7 478 aa6.5□□□□□ -1.37
USP54-206ENST00000433394 EPN1Q9Y6I3 576 aaPredicted RBP6.5□□□□□ -1.37
USP54-206ENST00000433394 PGPEP1LA6NFU8 196 aa6.49□□□□□ -1.37
USP54-206ENST00000433394 NPIPB13A6NJU9 1138 aa6.49□□□□□ -1.37
USP54-206ENST00000433394 TTC36A6NLP5 189 aa6.49□□□□□ -1.37
USP54-206ENST00000433394 NPIPB5A8MRT5 1133 aa6.49□□□□□ -1.37
USP54-206ENST00000433394 NPIPB4C9JG80 1138 aa6.49□□□□□ -1.37
USP54-206ENST00000433394 K7ENM7 598 aa6.49□□□□□ -1.37
USP54-206ENST00000433394 DSCR3O14972 297 aa6.49□□□□□ -1.37
USP54-206ENST00000433394 CNTN5O94779 1100 aa6.49□□□□□ -1.37
USP54-206ENST00000433394 CCNDBP1O95273 360 aa6.49□□□□□ -1.37
USP54-206ENST00000433394 F9P00740 461 aa6.49□□□□□ -1.37
USP54-206ENST00000433394 MBPP02686 304 aaPredicted RBP6.49□□□□□ -1.37
USP54-206ENST00000433394 AKR1A1P14550 325 aa6.49□□□□□ -1.37
USP54-206ENST00000433394 PRPH2P23942 346 aa6.49□□□□□ -1.37
USP54-206ENST00000433394 ADRA1BP35368 520 aa6.49□□□□□ -1.37
USP54-206ENST00000433394 POLD2P49005 469 aa6.49□□□□□ -1.37
USP54-206ENST00000433394 DCAF7P61962 342 aa6.49□□□□□ -1.37
USP54-206ENST00000433394 FNDC7Q5VTL7 733 aa6.49□□□□□ -1.37
USP54-206ENST00000433394 SPATA1Q5VX52 437 aa6.49□□□□□ -1.37
USP54-206ENST00000433394 TMEM200AQ86VY9 491 aa6.49□□□□□ -1.37
USP54-206ENST00000433394 SCN4BQ8IWT1 228 aa6.49□□□□□ -1.37
USP54-206ENST00000433394 DIS3L2Q8IYB7 885 aaKnown RBP6.49□□□□□ -1.37
USP54-206ENST00000433394 LSM14AQ8ND56 463 aaKnown RBP6.49□□□□□ -1.37
USP54-206ENST00000433394 BEND2Q8NDZ0 799 aa6.49□□□□□ -1.37
USP54-206ENST00000433394 CNOT9Q92600 299 aaKnown RBP6.49□□□□□ -1.37
USP54-206ENST00000433394 PRRX2Q99811 253 aa6.49□□□□□ -1.37
USP54-206ENST00000433394 DUSP26Q9BV47 211 aa6.49□□□□□ -1.37
USP54-206ENST00000433394 HERC2P3Q9BVR0 1158 aa6.49□□□□□ -1.37
USP54-206ENST00000433394 CADM1Q9BY67 442 aaKnown RBP6.49□□□□□ -1.37
USP54-206ENST00000433394 CTDSP1Q9GZU7 261 aa6.49□□□□□ -1.37
USP54-206ENST00000433394 TOR3AQ9H497 397 aa6.49□□□□□ -1.37
USP54-206ENST00000433394 DIAPH3Q9NSV4 1193 aa6.49□□□□□ -1.37
USP54-206ENST00000433394 TNFSF13BQ9Y275 285 aa6.49□□□□□ -1.37
USP54-206ENST00000433394 CNPY2Q9Y2B0 182 aa6.49□□□□□ -1.37
USP54-206ENST00000433394 SPATA31A5Q5VU36 1347 aa6.49□□□□□ -1.37
USP54-206ENST00000433394 SPATA31A6Q5VVP1 1343 aa6.49□□□□□ -1.37
USP54-206ENST00000433394 EMSYQ7Z589 1322 aa6.49□□□□□ -1.37
USP54-206ENST00000433394 SPATA31A7Q8IWB4 1347 aa6.49□□□□□ -1.37
USP54-206ENST00000433394 FSD2A1L4K1 749 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms