RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 LZTR1Q8N653 840 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 MAB21L3Q8N8X9 362 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 EIF1ADQ8N9N8 165 aaKnown RBP18.76■□□□□ 0.59
HMGN1-206ENST00000431390 CCHCR1Q8TD31 782 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 CYP2S1Q96SQ9 504 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 TMEM121Q9BTD3 319 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 KCNH6Q9H252 994 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 GKN1Q9NS71 199 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 DONSONQ9NYP3 566 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 MFHAS1Q9Y4C4 1052 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 CPQQ9Y646 472 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 TECTAO75443 2155 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 BCLAF3A2AJT9 711 aaKnown RBP18.76■□□□□ 0.59
HMGN1-206ENST00000431390 ZSCAN5CA6NGD5 496 aaPredicted RBP18.76■□□□□ 0.59
HMGN1-206ENST00000431390 DRGXA6NNA5 263 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 H7C0C1 242 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 ZNF197O14709 1029 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 MOSPD3O75425 235 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 ZNF189O75820 626 aaPredicted RBP18.76■□□□□ 0.59
HMGN1-206ENST00000431390 CKMP06732 381 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 STIP1P31948 543 aaKnown RBP18.76■□□□□ 0.59
HMGN1-206ENST00000431390 ATP5OP48047 213 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 BRD3Q15059 726 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 C5orf22Q49AR2 442 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 PRSS36Q5K4E3 855 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 NADSYN1Q6IA69 706 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 DARS2Q6PI48 645 aaKnown RBP18.76■□□□□ 0.59
HMGN1-206ENST00000431390 ZC3H18Q86VM9 953 aaKnown RBP18.76■□□□□ 0.59
HMGN1-206ENST00000431390 CHSY1Q86X52 802 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 CDKL3Q8IVW4 592 aaPredicted RBP18.76■□□□□ 0.59
HMGN1-206ENST00000431390 CCDC89Q8N998 374 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 ANKRD7Q92527 254 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 ZYG11BQ9C0D3 744 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 RETREG1Q9H6L5 497 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 FAM114A2Q9NRY5 505 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 ARGLU1Q9NWB6 273 aaPredicted RBP18.76■□□□□ 0.59
HMGN1-206ENST00000431390 VANGL2Q9ULK5 521 aa18.76■□□□□ 0.59
HMGN1-206ENST00000431390 CCDC151A5D8V7 595 aa18.75■□□□□ 0.59
HMGN1-206ENST00000431390 NCAM2O15394 837 aa18.75■□□□□ 0.59
HMGN1-206ENST00000431390 KLKB1P03952 638 aa18.75■□□□□ 0.59
HMGN1-206ENST00000431390 RHOQP17081 205 aa18.75■□□□□ 0.59
HMGN1-206ENST00000431390 TACR2P21452 398 aa18.75■□□□□ 0.59
HMGN1-206ENST00000431390 SMAD4Q13485 552 aaKnown RBP18.75■□□□□ 0.59
HMGN1-206ENST00000431390 CUL1Q13616 776 aa18.75■□□□□ 0.59
HMGN1-206ENST00000431390 PDK1Q15118 436 aa18.75■□□□□ 0.59
HMGN1-206ENST00000431390 SLC45A4Q5BKX6 768 aa18.75■□□□□ 0.59
HMGN1-206ENST00000431390 GPR158Q5T848 1215 aa18.75■□□□□ 0.59
HMGN1-206ENST00000431390 FBXL22Q6P050 247 aa18.75■□□□□ 0.59
HMGN1-206ENST00000431390 TMEM184AQ6ZMB5 413 aa18.75■□□□□ 0.59
HMGN1-206ENST00000431390 DENND1CQ8IV53 801 aa18.75■□□□□ 0.59
HMGN1-206ENST00000431390 RTL3Q8N8U3 475 aaKnown RBP18.75■□□□□ 0.59
HMGN1-206ENST00000431390 VN1R2Q8NFZ6 395 aa18.75■□□□□ 0.59
HMGN1-206ENST00000431390 RSAD2Q8WXG1 361 aa18.75■□□□□ 0.59
HMGN1-206ENST00000431390 QKIQ96PU8 341 aaKnown RBP eCLIP18.75■□□□□ 0.593e-41■■■■■ 75.6
HMGN1-206ENST00000431390 DDX50Q9BQ39 737 aaKnown RBP18.75■□□□□ 0.59
HMGN1-206ENST00000431390 SLC46A2Q9BY10 475 aa18.75■□□□□ 0.59
HMGN1-206ENST00000431390 TASP1Q9H6P5 420 aa18.75■□□□□ 0.59
HMGN1-206ENST00000431390 SMPD4Q9NXE4 827 aa18.75■□□□□ 0.59
HMGN1-206ENST00000431390 STOML2Q9UJZ1 356 aa18.75■□□□□ 0.59
HMGN1-206ENST00000431390 F5H5T6 163 aa18.74■□□□□ 0.59
HMGN1-206ENST00000431390 SGK1O00141 431 aa18.74■□□□□ 0.59
HMGN1-206ENST00000431390 NRG2O14511 850 aaPredicted RBP18.74■□□□□ 0.59
HMGN1-206ENST00000431390 PPP1R12AO14974 1030 aaPredicted RBP18.74■□□□□ 0.59
HMGN1-206ENST00000431390 KRT14P02533 472 aa18.74■□□□□ 0.59
HMGN1-206ENST00000431390 IRF1P10914 325 aa18.74■□□□□ 0.59
HMGN1-206ENST00000431390 H2AFXP16104 143 aaPredicted RBP18.74■□□□□ 0.59
HMGN1-206ENST00000431390 GJA1P17302 382 aa18.74■□□□□ 0.59
HMGN1-206ENST00000431390 MX2P20592 715 aa18.74■□□□□ 0.59
HMGN1-206ENST00000431390 RBM10P98175 930 aaKnown RBP18.74■□□□□ 0.59
HMGN1-206ENST00000431390 FAM133BQ5BKY9 247 aaKnown RBP18.74■□□□□ 0.59
HMGN1-206ENST00000431390 CCNI2Q6ZMN8 369 aaPredicted RBP18.74■□□□□ 0.59
HMGN1-206ENST00000431390 GRASPQ7Z6J2 395 aaPredicted RBP18.74■□□□□ 0.59
HMGN1-206ENST00000431390 NLRP14Q86W24 1093 aa18.74■□□□□ 0.59
HMGN1-206ENST00000431390 RNF135Q8IUD6 432 aa18.74■□□□□ 0.59
HMGN1-206ENST00000431390 CASKIN2Q8WXE0 1202 aa18.74■□□□□ 0.59
HMGN1-206ENST00000431390 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.74■□□□□ 0.59
HMGN1-206ENST00000431390 SMG7Q92540 1137 aaKnown RBP18.74■□□□□ 0.59
HMGN1-206ENST00000431390 TCEAL4Q96EI5 215 aa18.74■□□□□ 0.59
HMGN1-206ENST00000431390 BRD8Q9H0E9 1235 aa18.74■□□□□ 0.59
HMGN1-206ENST00000431390 PIDD1Q9HB75 910 aa18.74■□□□□ 0.59
HMGN1-206ENST00000431390 PCDH9Q9HC56 1237 aa18.74■□□□□ 0.59
HMGN1-206ENST00000431390 TMEM248Q9NWD8 314 aa18.74■□□□□ 0.59
HMGN1-206ENST00000431390 CD207Q9UJ71 328 aa18.74■□□□□ 0.59
HMGN1-206ENST00000431390 LSM7Q9UK45 103 aaKnown RBP18.74■□□□□ 0.59
HMGN1-206ENST00000431390 AGO1Q9UL18 857 aaKnown RBP18.74■□□□□ 0.59
HMGN1-206ENST00000431390 ARHGAP26Q9UNA1 814 aa18.74■□□□□ 0.59
HMGN1-206ENST00000431390 ESYT3A0FGR9 886 aa18.73■□□□□ 0.59
HMGN1-206ENST00000431390 ERLIN1O75477 346 aa18.73■□□□□ 0.59
HMGN1-206ENST00000431390 MAP3K6O95382 1288 aa18.73■□□□□ 0.59
HMGN1-206ENST00000431390 TEAD2Q15562 447 aa18.73■□□□□ 0.59
HMGN1-206ENST00000431390 SLC5A9Q2M3M2 681 aa18.73■□□□□ 0.59
HMGN1-206ENST00000431390 STXBP5Q5T5C0 1151 aa18.73■□□□□ 0.59
HMGN1-206ENST00000431390 ADGRF1Q5T601 910 aa18.73■□□□□ 0.59
HMGN1-206ENST00000431390 DDX42Q86XP3 938 aaKnown RBP eCLIP18.73■□□□□ 0.594e-6■□□□□ 10.9
HMGN1-206ENST00000431390 NPWQ8N729 165 aa18.73■□□□□ 0.59
HMGN1-206ENST00000431390 TFB1MQ8WVM0 346 aaKnown RBP18.73■□□□□ 0.59
HMGN1-206ENST00000431390 RTP4Q96DX8 246 aa18.73■□□□□ 0.59
HMGN1-206ENST00000431390 RPRD1AQ96P16 312 aaPredicted RBP18.73■□□□□ 0.59
HMGN1-206ENST00000431390 HINFPQ9BQA5 517 aa18.73■□□□□ 0.59
HMGN1-206ENST00000431390 KLC2Q9H0B6 622 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms