RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 TMA16Q96EY4 203 aaKnown RBP8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 ASIC4Q96FT7 647 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 FAM118BQ9BPY3 351 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 TUBB2BQ9BVA1 445 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 BBS2Q9BXC9 721 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 AP1M1Q9BXS5 423 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 LINC00597Q9H2U6 94 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 EBF3Q9H4W6 596 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 ETNK2Q9NVF9 386 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 DONSONQ9NYP3 566 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 PLK2Q9NYY3 685 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 THEGQ9P2T0 379 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 PPARGC1AQ9UBK2 798 aaKnown RBP8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 TTC7AQ9ULT0 858 aaPredicted RBP8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 EFR3BQ9Y2G0 817 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 MFHAS1Q9Y4C4 1052 aa8.14□□□□□ -1.11
HMGA1P4-201ENST00000428643 SPTBN5Q9NRC6 3674 aaKnown RBP8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 DRGXA6NNA5 263 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 ANHXE9PGG2 379 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 H0Y626 953 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 APOC4-APOC2K7ER74 178 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 PDE2AO00408 941 aaPredicted RBP8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 MCF2LO15068 1137 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 RAMP2O60895 175 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 APOC2P02655 101 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 RHOCP08134 193 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 HOXD9P28356 352 aaPredicted RBP8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 OR1E1P30953 314 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 CDH4P55283 916 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 TNK2Q07912 1038 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 ADCY2Q08462 1091 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 FCHO2Q0JRZ9 810 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 KLF1Q13351 362 aaPredicted RBP8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 ZNF177Q13360 481 aaPredicted RBP8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 DHCR24Q15392 516 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 AAK1Q2M2I8 961 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 EML3Q32P44 896 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 C6orf118Q5T5N4 469 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 NPNTQ6UXI9 565 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 NLRP14Q86W24 1093 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 ZNF354CQ86Y25 554 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 TMEM25Q86YD3 366 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 PLCD3Q8N3E9 789 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 ATPAF2Q8N5M1 289 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 PLD5Q8N7P1 536 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 TTC13Q8NBP0 860 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 NETO2Q8NC67 525 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 ACTL9Q8TC94 416 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 C1orf54Q8WWF1 131 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 RSAD2Q8WXG1 361 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 P3H4Q92791 437 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 CELF6Q96J87 481 aaKnown RBP8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 TRMT61BQ9BVS5 477 aaKnown RBP8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 PLA2G2FQ9BZM2 168 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 BRD9Q9H8M2 597 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 PRDM16Q9HAZ2 1276 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 RRAGDQ9NQL2 400 aaPredicted RBP8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 SPHK2Q9NRA0 654 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 TMEM248Q9NWD8 314 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 SAE1Q9UBE0 346 aaPredicted RBP8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 RNF14Q9UBS8 474 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 LIMD1Q9UGP4 676 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 R3HDM2Q9Y2K5 976 aaKnown RBP8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 VCANP13611 3396 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 ZNF638Q14966 1978 aaKnown RBP8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 C2orf16Q68DN1 1984 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 OBSL1O75147 1896 aa8.13□□□□□ -1.11
HMGA1P4-201ENST00000428643 MYO9BQ13459 2157 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 WASH4PA8MWX3 477 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 H7C0C1 242 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 GFRA2O00451 464 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 PPP1R12AO14974 1030 aaPredicted RBP8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 CHADO15335 359 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 HOXC11O43248 304 aaPredicted RBP8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 PENKP01210 267 aaPredicted RBP8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 ASGR2P07307 311 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 TYRP14679 529 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 MX2P20592 715 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 ETFBP38117 255 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 ATP5OP48047 213 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 NR2C2P49116 596 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 EIF3EP60228 445 aaKnown RBP8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 OTUD4Q01804 1114 aaKnown RBP8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 GAD2Q05329 585 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 C2orf54Q08AI8 447 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 NR1H3Q13133 447 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 SNX1Q13596 522 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 PAFAH1B3Q15102 231 aaKnown RBP8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 PARP15Q460N3 678 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 C5orf22Q49AR2 442 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 MPP7Q5T2T1 576 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 ARTNQ5T4W7 220 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 FYB2Q5VWT5 728 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 IL31Q6EBC2 164 aa8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 CXorf57Q6NSI4 855 aaKnown RBP8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 BZW1Q7L1Q6 419 aaKnown RBP8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 ZC3H18Q86VM9 953 aaKnown RBP8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 CDKL3Q8IVW4 592 aaPredicted RBP8.12□□□□□ -1.11
HMGA1P4-201ENST00000428643 ZDHHC14Q8IZN3 488 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms