RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 ENGASEQ8NFI3 743 aa17.14■□□□□ 0.33
VARS-216ENST00000428445 GOLGA1Q92805 767 aa17.14■□□□□ 0.33
VARS-216ENST00000428445 FAM149B1Q96BN6 582 aa17.14■□□□□ 0.33
VARS-216ENST00000428445 SLC39A13Q96H72 371 aa17.14■□□□□ 0.33
VARS-216ENST00000428445 GSDMAQ96QA5 445 aa17.14■□□□□ 0.33
VARS-216ENST00000428445 OMDQ99983 421 aa17.14■□□□□ 0.33
VARS-216ENST00000428445 FBRSQ9HAH7 460 aa17.14■□□□□ 0.33
VARS-216ENST00000428445 ST7Q9NRC1 585 aa17.14■□□□□ 0.33
VARS-216ENST00000428445 KNTC1P50748 2209 aa17.13■□□□□ 0.33
VARS-216ENST00000428445 A0A1B0GTQ1 180 aa17.13■□□□□ 0.33
VARS-216ENST00000428445 VILLO15195 856 aa17.13■□□□□ 0.33
VARS-216ENST00000428445 RACK1P63244 317 aaKnown RBP17.13■□□□□ 0.33
VARS-216ENST00000428445 BNIP3Q12983 259 aa17.13■□□□□ 0.33
VARS-216ENST00000428445 CDH18Q13634 790 aa17.13■□□□□ 0.33
VARS-216ENST00000428445 SMAD1Q15797 465 aaKnown RBP17.13■□□□□ 0.33
VARS-216ENST00000428445 CCDC40Q4G0X9 1142 aa17.13■□□□□ 0.33
VARS-216ENST00000428445 ZC3H12AQ5D1E8 599 aaKnown RBP17.13■□□□□ 0.33
VARS-216ENST00000428445 USP30Q70CQ3 517 aa17.13■□□□□ 0.33
VARS-216ENST00000428445 SMARCE1Q969G3 411 aa17.13■□□□□ 0.33
VARS-216ENST00000428445 AZIN2Q96A70 460 aa17.13■□□□□ 0.33
VARS-216ENST00000428445 HSFY1Q96LI6 401 aa17.13■□□□□ 0.33
VARS-216ENST00000428445 KREMEN1Q96MU8 473 aa17.13■□□□□ 0.33
VARS-216ENST00000428445 ACE2Q9BYF1 805 aaPredicted RBP17.13■□□□□ 0.33
VARS-216ENST00000428445 ACP6Q9NPH0 428 aa17.13■□□□□ 0.33
VARS-216ENST00000428445 AASDHPPTQ9NRN7 309 aa17.13■□□□□ 0.33
VARS-216ENST00000428445 FTSJ1Q9UET6 329 aa17.13■□□□□ 0.33
VARS-216ENST00000428445 CYTH4Q9UIA0 394 aa17.13■□□□□ 0.33
VARS-216ENST00000428445 CEP83Q9Y592 693 aa17.13■□□□□ 0.33
VARS-216ENST00000428445 IGSF10Q6WRI0 2623 aa17.13■□□□□ 0.33
VARS-216ENST00000428445 NYNRINQ9P2P1 1898 aaKnown RBP17.12■□□□□ 0.33
VARS-216ENST00000428445 MYLKQ15746 1914 aa17.12■□□□□ 0.33
VARS-216ENST00000428445 LUC7L3O95232 432 aaKnown RBP17.12■□□□□ 0.33
VARS-216ENST00000428445 GPD2P43304 727 aa17.12■□□□□ 0.33
VARS-216ENST00000428445 LRRC63Q05C16 580 aa17.12■□□□□ 0.33
VARS-216ENST00000428445 TAF5Q15542 800 aa17.12■□□□□ 0.33
VARS-216ENST00000428445 KLHL10Q6JEL2 608 aa17.12■□□□□ 0.33
VARS-216ENST00000428445 GALNT15Q8N3T1 639 aa17.12■□□□□ 0.33
VARS-216ENST00000428445 EID2Q8N6I1 236 aa17.12■□□□□ 0.33
VARS-216ENST00000428445 OR14C36Q8NHC7 312 aa17.12■□□□□ 0.33
VARS-216ENST00000428445 SPATA20Q8TB22 786 aa17.12■□□□□ 0.33
VARS-216ENST00000428445 PTPRN2Q92932 1015 aa17.12■□□□□ 0.33
VARS-216ENST00000428445 ELF4Q99607 663 aaPredicted RBP17.12■□□□□ 0.33
VARS-216ENST00000428445 IRX2Q9BZI1 471 aaPredicted RBP17.12■□□□□ 0.33
VARS-216ENST00000428445 TJP2Q9UDY2 1190 aa17.12■□□□□ 0.33
VARS-216ENST00000428445 TLR6Q9Y2C9 796 aa17.12■□□□□ 0.33
VARS-216ENST00000428445 A0A1W2PR77 199 aa17.11■□□□□ 0.33
VARS-216ENST00000428445 RNASEH1O60930 286 aaKnown RBP17.11■□□□□ 0.33
VARS-216ENST00000428445 FBXO21O94952 628 aa17.11■□□□□ 0.33
VARS-216ENST00000428445 ASLP04424 464 aa17.11■□□□□ 0.33
VARS-216ENST00000428445 TACR2P21452 398 aa17.11■□□□□ 0.33
VARS-216ENST00000428445 MZF1P28698 734 aaPredicted RBP17.11■□□□□ 0.33
VARS-216ENST00000428445 PPP2CBP62714 309 aa17.11■□□□□ 0.33
VARS-216ENST00000428445 PPP2CAP67775 309 aa17.11■□□□□ 0.33
VARS-216ENST00000428445 ECT2LQ008S8 904 aa17.11■□□□□ 0.33
VARS-216ENST00000428445 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.11■□□□□ 0.33
VARS-216ENST00000428445 EHBP1Q8NDI1 1231 aa17.11■□□□□ 0.33
VARS-216ENST00000428445 OR2T34Q8NGX1 318 aa17.11■□□□□ 0.33
VARS-216ENST00000428445 DCBLD2Q96PD2 775 aa17.11■□□□□ 0.33
VARS-216ENST00000428445 DDX50Q9BQ39 737 aaKnown RBP17.11■□□□□ 0.33
VARS-216ENST00000428445 CAAP1Q9H8G2 361 aa17.11■□□□□ 0.33
VARS-216ENST00000428445 METTL14Q9HCE5 456 aaKnown RBP17.11■□□□□ 0.33
VARS-216ENST00000428445 MAN1B1Q9UKM7 699 aa17.11■□□□□ 0.33
VARS-216ENST00000428445 SYNJ2BP-COX16A0A087WUM0 186 aa17.1■□□□□ 0.33
VARS-216ENST00000428445 TARSL2A2RTX5 802 aaKnown RBP17.1■□□□□ 0.33
VARS-216ENST00000428445 TYW5A2RUC4 315 aaKnown RBP17.1■□□□□ 0.33
VARS-216ENST00000428445 LRRC72A6NJI9 287 aa17.1■□□□□ 0.33
VARS-216ENST00000428445 ENC1O14682 589 aa17.1■□□□□ 0.33
VARS-216ENST00000428445 PMM2O15305 246 aa17.1■□□□□ 0.33
VARS-216ENST00000428445 PAPSS1O43252 624 aaPredicted RBP17.1■□□□□ 0.33
VARS-216ENST00000428445 SMC2O95347 1197 aa17.1■□□□□ 0.33
VARS-216ENST00000428445 LDOC1O95751 146 aaPredicted RBP17.1■□□□□ 0.33
VARS-216ENST00000428445 IL1BP01584 269 aa17.1■□□□□ 0.33
VARS-216ENST00000428445 ITGAVP06756 1048 aa17.1■□□□□ 0.33
VARS-216ENST00000428445 KRT5P13647 590 aa17.1■□□□□ 0.33
VARS-216ENST00000428445 PDGFRAP16234 1089 aa17.1■□□□□ 0.33
VARS-216ENST00000428445 BMP6P22004 513 aa17.1■□□□□ 0.33
VARS-216ENST00000428445 CD38P28907 300 aa17.1■□□□□ 0.33
VARS-216ENST00000428445 ADPRHP54922 357 aa17.1■□□□□ 0.33
VARS-216ENST00000428445 STX17P56962 302 aa17.1■□□□□ 0.33
VARS-216ENST00000428445 POM121L1PQ3SYA9 428 aa17.1■□□□□ 0.33
VARS-216ENST00000428445 CHSY1Q86X52 802 aa17.1■□□□□ 0.33
VARS-216ENST00000428445 SAP25Q8TEE9 199 aa17.1■□□□□ 0.33
VARS-216ENST00000428445 SERAC1Q96JX3 654 aa17.1■□□□□ 0.33
VARS-216ENST00000428445 CNDP2Q96KP4 475 aaKnown RBP17.1■□□□□ 0.33
VARS-216ENST00000428445 SERPINB11Q96P15 392 aa17.1■□□□□ 0.33
VARS-216ENST00000428445 COX16Q9P0S2 106 aa17.1■□□□□ 0.33
VARS-216ENST00000428445 HOOK1Q9UJC3 728 aaKnown RBP17.1■□□□□ 0.33
VARS-216ENST00000428445 SCML1Q9UN30 329 aa17.1■□□□□ 0.33
VARS-216ENST00000428445 SHROOM3Q8TF72 1996 aa17.09■□□□□ 0.33
VARS-216ENST00000428445 ARID1BQ8NFD5 2236 aaPredicted RBP17.09■□□□□ 0.33
VARS-216ENST00000428445 TBC1D3DA0A087WVF3 549 aa17.09■□□□□ 0.33
VARS-216ENST00000428445 TBC1D3IA0A087WXS9 549 aa17.09■□□□□ 0.33
VARS-216ENST00000428445 TBC1D3EA0A087X179 549 aa17.09■□□□□ 0.33
VARS-216ENST00000428445 TBC1D3KA0A087X1G2 549 aa17.09■□□□□ 0.33
VARS-216ENST00000428445 EDDM13A0A1B0GTR0 161 aa17.09■□□□□ 0.33
VARS-216ENST00000428445 TBC1D3FA6NER0 549 aaPredicted RBP17.09■□□□□ 0.33
VARS-216ENST00000428445 C10orf142B7Z368 130 aa17.09■□□□□ 0.33
VARS-216ENST00000428445 TBC1D3LB9A6J9 549 aa17.09■□□□□ 0.33
VARS-216ENST00000428445 E5RJQ4 531 aa17.09■□□□□ 0.33
VARS-216ENST00000428445 CAPN9O14815 690 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms