RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 BMPR2Q13873 1038 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 MRPL58Q14197 206 aaKnown RBP10.67□□□□□ -0.7
HDAC9-210ENST00000428307 TEX44Q53QW1 395 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 BRMS1LQ5PSV4 323 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 HHATQ5VTY9 493 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 LRRC8BQ6P9F7 803 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 RNF19BQ6ZMZ0 732 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 C14orf80Q86SX3 495 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 MIB1Q86YT6 1006 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 ANKS4BQ8N8V4 417 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 OR52K1Q8NGK4 314 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 ARNTL2Q8WYA1 636 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 HDAC11Q96DB2 347 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 C8orf48Q96LL4 319 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 HAPLN3Q96S86 360 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 APOL2Q9BQE5 337 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 GORASP1Q9BQQ3 440 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 NSRP1Q9H0G5 558 aaKnown RBP10.67□□□□□ -0.7
HDAC9-210ENST00000428307 FBXO44Q9H4M3 255 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 ALG13Q9NP73 1137 aaKnown RBP10.67□□□□□ -0.7
HDAC9-210ENST00000428307 IL1RAPL1Q9NZN1 696 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 PCDH10Q9P2E7 1040 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 IGSF9Q9P2J2 1179 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 SLC17A7Q9P2U7 560 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 GGT7Q9UJ14 662 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 SCML2Q9UQR0 700 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 PCDHA11Q9Y5I1 949 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 SNX3O60493 162 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 NFKB1P19838 968 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 FGFR3P22607 806 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 PRKCHP24723 683 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 ADRA1DP25100 572 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 LIG3P49916 1009 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 EFEMP1Q12805 493 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 PRSS55Q6UWB4 352 aaPredicted RBP10.67□□□□□ -0.7
HDAC9-210ENST00000428307 NPAS4Q8IUM7 802 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 BANPQ8N9N5 519 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 DNAAF3Q8N9W5 541 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 BCL7CQ8WUZ0 217 aaPredicted RBP10.67□□□□□ -0.7
HDAC9-210ENST00000428307 THOC1Q96FV9 657 aaKnown RBP10.67□□□□□ -0.7
HDAC9-210ENST00000428307 SLCO1B3Q9NPD5 702 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 PAK6Q9NQU5 681 aaPredicted RBP10.67□□□□□ -0.7
HDAC9-210ENST00000428307 SYBUQ9NX95 663 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 SLC17A6Q9P2U8 582 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 NEU3Q9UQ49 428 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 HS3ST4Q9Y661 456 aa10.67□□□□□ -0.7
HDAC9-210ENST00000428307 ARHGAP42A6NI28 874 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 MLNP12872 115 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 YWHAQP27348 245 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 ZNF135P52742 658 aaPredicted RBP10.66□□□□□ -0.7
HDAC9-210ENST00000428307 TAF10Q12962 218 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 MROH9Q5TGP6 573 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 TTC39BQ5VTQ0 682 aaPredicted RBP10.66□□□□□ -0.7
HDAC9-210ENST00000428307 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.66□□□□□ -0.7
HDAC9-210ENST00000428307 CCDC121Q6ZUS5 278 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 OTOP3Q7RTS5 596 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 CRIPAKQ8N1N5 446 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 GIPC2Q8TF65 315 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 FBXO32Q969P5 355 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 OXNAD1Q96HP4 312 aaPredicted RBP10.66□□□□□ -0.7
HDAC9-210ENST00000428307 SERPINB11Q96P15 392 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 PITPNM3Q9BZ71 974 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 EIF2B3Q9NR50 452 aaKnown RBP10.66□□□□□ -0.7
HDAC9-210ENST00000428307 GGA2Q9UJY4 613 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 RAD54BQ9Y620 910 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 NUP205Q92621 2012 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 MTMR11A4FU01 709 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 OR6C75A6NL08 312 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 KCNU1A8MYU2 1149 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 C2CD2LO14523 706 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 LPXNO60711 386 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 KRT37O76014 449 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 HMBSP08397 361 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 SNRPAP09012 282 aaKnown RBP10.66□□□□□ -0.7
HDAC9-210ENST00000428307 CCL5P13501 91 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 RPL17P18621 184 aaKnown RBP10.66□□□□□ -0.7
HDAC9-210ENST00000428307 SLC18A1P54219 525 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 MLLT6P55198 1093 aaPredicted RBP10.66□□□□□ -0.7
HDAC9-210ENST00000428307 TLE2Q04725 743 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 PPP2R5DQ14738 602 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 SPRED3Q2MJR0 410 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 CNTD1Q8N815 330 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 TBC1D31Q96DN5 1066 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 TEKT5Q96M29 485 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 SLC13A1Q9BZW2 595 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 SLC39A8Q9C0K1 460 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 BRD8Q9H0E9 1235 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 MOCS1Q9NZB8 636 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 VANGL2Q9ULK5 521 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 CDY1Q9Y6F8 540 aa10.66□□□□□ -0.7
HDAC9-210ENST00000428307 FAM159BA6NKW6 160 aa10.65□□□□□ -0.7
HDAC9-210ENST00000428307 E9PAM4 449 aa10.65□□□□□ -0.7
HDAC9-210ENST00000428307 HGSO14964 777 aaPredicted RBP10.65□□□□□ -0.7
HDAC9-210ENST00000428307 ADAM12O43184 909 aa10.65□□□□□ -0.7
HDAC9-210ENST00000428307 MTSS1O43312 755 aa10.65□□□□□ -0.7
HDAC9-210ENST00000428307 ATP9BO43861 1147 aa10.65□□□□□ -0.7
HDAC9-210ENST00000428307 ZWINTO95229 277 aa10.65□□□□□ -0.7
HDAC9-210ENST00000428307 VNN2O95498 520 aa10.65□□□□□ -0.7
HDAC9-210ENST00000428307 AP2A1O95782 977 aa10.65□□□□□ -0.7
HDAC9-210ENST00000428307 TPH1P17752 444 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms