RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 LEKR1Q6ZMV7 388 aa27.3■■□□□ 1.96
SH3GL3-202ENST00000427482 PID1Q7Z2X4 250 aa27.3■■□□□ 1.96
SH3GL3-202ENST00000427482 ATP6V0D2Q8N8Y2 350 aa27.3■■□□□ 1.96
SH3GL3-202ENST00000427482 MAML1Q92585 1016 aa27.3■■□□□ 1.96
SH3GL3-202ENST00000427482 F5H423 210 aaPredicted RBP27.3■■□□□ 1.96
SH3GL3-202ENST00000427482 SARNPP82979 210 aaKnown RBP27.3■■□□□ 1.96
SH3GL3-202ENST00000427482 TMED2Q15363 201 aa27.3■■□□□ 1.96
SH3GL3-202ENST00000427482 TADA2BQ86TJ2 420 aa27.3■■□□□ 1.96
SH3GL3-202ENST00000427482 MIB1Q86YT6 1006 aa27.3■■□□□ 1.96
SH3GL3-202ENST00000427482 ZNF683Q8IZ20 524 aa27.3■■□□□ 1.96
SH3GL3-202ENST00000427482 VAT1Q99536 393 aa27.3■■□□□ 1.96
SH3GL3-202ENST00000427482 WASH4PA8MWX3 477 aa27.29■■□□□ 1.96
SH3GL3-202ENST00000427482 MLNP12872 115 aa27.29■■□□□ 1.96
SH3GL3-202ENST00000427482 GEMIN4P57678 1058 aaKnown RBP27.29■■□□□ 1.96
SH3GL3-202ENST00000427482 LRRC31Q6UY01 552 aa27.29■■□□□ 1.96
SH3GL3-202ENST00000427482 DDX53Q86TM3 631 aaKnown RBP27.29■■□□□ 1.96
SH3GL3-202ENST00000427482 ZNF276Q8N554 614 aa27.29■■□□□ 1.96
SH3GL3-202ENST00000427482 PDCD7Q8N8D1 485 aaKnown RBP27.29■■□□□ 1.96
SH3GL3-202ENST00000427482 RTL3Q8N8U3 475 aaKnown RBP27.29■■□□□ 1.96
SH3GL3-202ENST00000427482 BTN2A3PQ96KV6 586 aa27.29■■□□□ 1.96
SH3GL3-202ENST00000427482 TSGA13Q96PP4 275 aa27.29■■□□□ 1.96
SH3GL3-202ENST00000427482 CCSER2Q9H7U1 834 aa27.29■■□□□ 1.96
SH3GL3-202ENST00000427482 PCDH10Q9P2E7 1040 aa27.29■■□□□ 1.96
SH3GL3-202ENST00000427482 TRHDEQ9UKU6 1024 aa27.29■■□□□ 1.96
SH3GL3-202ENST00000427482 SLC12A8A0AV02 714 aa27.28■■□□□ 1.96
SH3GL3-202ENST00000427482 TLR5O60602 858 aa27.28■■□□□ 1.96
SH3GL3-202ENST00000427482 GRIA1P42261 906 aa27.28■■□□□ 1.96
SH3GL3-202ENST00000427482 PPARDQ03181 441 aa27.28■■□□□ 1.96
SH3GL3-202ENST00000427482 ZBTB17Q13105 803 aa27.28■■□□□ 1.96
SH3GL3-202ENST00000427482 MS4A13Q5J8X5 152 aa27.28■■□□□ 1.96
SH3GL3-202ENST00000427482 MDM1Q8TC05 714 aa27.28■■□□□ 1.96
SH3GL3-202ENST00000427482 OVCA2Q8WZ82 227 aa27.28■■□□□ 1.96
SH3GL3-202ENST00000427482 SIGLEC10Q96LC7 697 aa27.28■■□□□ 1.96
SH3GL3-202ENST00000427482 XPO6Q96QU8 1125 aaKnown RBP27.28■■□□□ 1.96
SH3GL3-202ENST00000427482 TMEM106CQ9BVX2 250 aa27.28■■□□□ 1.96
SH3GL3-202ENST00000427482 RING1Q06587 406 aa27.27■■□□□ 1.96
SH3GL3-202ENST00000427482 NR1H3Q13133 447 aa27.27■■□□□ 1.96
SH3GL3-202ENST00000427482 EFTUD2Q15029 972 aaKnown RBP eCLIP27.27■■□□□ 1.96
SH3GL3-202ENST00000427482 GLIPR1L2Q4G1C9 344 aa27.27■■□□□ 1.96
SH3GL3-202ENST00000427482 AFMIDQ63HM1 303 aa27.27■■□□□ 1.96
SH3GL3-202ENST00000427482 PDZD8Q8NEN9 1154 aa27.27■■□□□ 1.96
SH3GL3-202ENST00000427482 DHRS4Q9BTZ2 278 aa27.27■■□□□ 1.96
SH3GL3-202ENST00000427482 IL23AQ9NPF7 189 aa27.27■■□□□ 1.96
SH3GL3-202ENST00000427482 FNIP2Q9P278 1114 aa27.27■■□□□ 1.96
SH3GL3-202ENST00000427482 PSMC3IPQ9P2W1 217 aaPredicted RBP27.27■■□□□ 1.96
SH3GL3-202ENST00000427482 ZC3H7BQ9UGR2 993 aaKnown RBP27.27■■□□□ 1.96
SH3GL3-202ENST00000427482 ACTL7BQ9Y614 415 aa27.27■■□□□ 1.96
SH3GL3-202ENST00000427482 TCRBV9S1A1TA0A576 114 aa27.27■■□□□ 1.96
SH3GL3-202ENST00000427482 FOXO6A8MYZ6 492 aa27.27■■□□□ 1.96
SH3GL3-202ENST00000427482 DFFAO00273 331 aa27.27■■□□□ 1.96
SH3GL3-202ENST00000427482 URODP06132 367 aa27.27■■□□□ 1.96
SH3GL3-202ENST00000427482 CHN1P15882 459 aa27.27■■□□□ 1.96
SH3GL3-202ENST00000427482 CCNCP24863 283 aa27.27■■□□□ 1.96
SH3GL3-202ENST00000427482 TEX44Q53QW1 395 aa27.27■■□□□ 1.96
SH3GL3-202ENST00000427482 LRRC8BQ6P9F7 803 aa27.27■■□□□ 1.96
SH3GL3-202ENST00000427482 ATPAF2Q8N5M1 289 aa27.27■■□□□ 1.96
SH3GL3-202ENST00000427482 ZSCAN18Q8TBC5 510 aaPredicted RBP27.27■■□□□ 1.96
SH3GL3-202ENST00000427482 CENPTQ96BT3 561 aa27.27■■□□□ 1.96
SH3GL3-202ENST00000427482 CFAP36Q96G28 342 aa27.27■■□□□ 1.96
SH3GL3-202ENST00000427482 CDK5RAP1Q96SZ6 601 aaKnown RBP27.27■■□□□ 1.96
SH3GL3-202ENST00000427482 YME1L1Q96TA2 773 aa27.27■■□□□ 1.96
SH3GL3-202ENST00000427482 GORASP1Q9BQQ3 440 aa27.27■■□□□ 1.96
SH3GL3-202ENST00000427482 SLC39A8Q9C0K1 460 aa27.27■■□□□ 1.96
SH3GL3-202ENST00000427482 GBA3Q9H227 469 aa27.27■■□□□ 1.96
SH3GL3-202ENST00000427482 NDFIP2Q9NV92 336 aa27.27■■□□□ 1.96
SH3GL3-202ENST00000427482 MPP6Q9NZW5 540 aa27.27■■□□□ 1.96
SH3GL3-202ENST00000427482 PPARGC1AQ9UBK2 798 aaKnown RBP27.27■■□□□ 1.96
SH3GL3-202ENST00000427482 VANGL2Q9ULK5 521 aa27.27■■□□□ 1.96
SH3GL3-202ENST00000427482 SRRM3A6NNA2 597 aaPredicted RBP27.26■■□□□ 1.95
SH3GL3-202ENST00000427482 ZBTB24O43167 697 aaPredicted RBP27.26■■□□□ 1.95
SH3GL3-202ENST00000427482 CPP00450 1065 aa27.26■■□□□ 1.95
SH3GL3-202ENST00000427482 CREB1P16220 341 aa27.26■■□□□ 1.95
SH3GL3-202ENST00000427482 C1QTNF8P60827 252 aa27.26■■□□□ 1.95
SH3GL3-202ENST00000427482 SNX30Q5VWJ9 437 aa27.26■■□□□ 1.95
SH3GL3-202ENST00000427482 ITPRIPL1Q6GPH6 555 aa27.26■■□□□ 1.95
SH3GL3-202ENST00000427482 NLRP14Q86W24 1093 aa27.26■■□□□ 1.95
SH3GL3-202ENST00000427482 CYTH2Q99418 400 aa27.26■■□□□ 1.95
SH3GL3-202ENST00000427482 GSTA2P09210 222 aa27.25■■□□□ 1.95
SH3GL3-202ENST00000427482 HMGA1P17096 107 aaKnown RBP27.25■■□□□ 1.95
SH3GL3-202ENST00000427482 CD68P34810 354 aaPredicted RBP27.25■■□□□ 1.95
SH3GL3-202ENST00000427482 KPNA1P52294 538 aaPredicted RBP27.25■■□□□ 1.95
SH3GL3-202ENST00000427482 RAB33AQ14088 237 aa27.25■■□□□ 1.95
SH3GL3-202ENST00000427482 ARHGAP36Q6ZRI8 547 aa27.25■■□□□ 1.95
SH3GL3-202ENST00000427482 OTOP2Q7RTS6 562 aa27.25■■□□□ 1.95
SH3GL3-202ENST00000427482 TEKT5Q96M29 485 aa27.25■■□□□ 1.95
SH3GL3-202ENST00000427482 PAFAH2Q99487 392 aa27.25■■□□□ 1.95
SH3GL3-202ENST00000427482 EBNA1BP2Q99848 306 aaKnown RBP27.25■■□□□ 1.95
SH3GL3-202ENST00000427482 CYP4F11Q9HBI6 524 aa27.25■■□□□ 1.95
SH3GL3-202ENST00000427482 PLAC1Q9HBJ0 212 aa27.25■■□□□ 1.95
SH3GL3-202ENST00000427482 RSPH14Q9UHP6 348 aa27.25■■□□□ 1.95
SH3GL3-202ENST00000427482 TTLL3Q9Y4R7 772 aa27.25■■□□□ 1.95
SH3GL3-202ENST00000427482 YIPF1Q9Y548 306 aa27.25■■□□□ 1.95
SH3GL3-202ENST00000427482 ALPK3Q96L96 1907 aa27.25■■□□□ 1.95
SH3GL3-202ENST00000427482 ANAPC1Q9H1A4 1944 aa27.25■■□□□ 1.95
SH3GL3-202ENST00000427482 IGLV3-10A0A075B6K4 115 aa27.25■■□□□ 1.95
SH3GL3-202ENST00000427482 ERICH4A6NGS2 130 aa27.25■■□□□ 1.95
SH3GL3-202ENST00000427482 HMBSP08397 361 aa27.25■■□□□ 1.95
SH3GL3-202ENST00000427482 CSH1P0DML2 217 aa27.25■■□□□ 1.95
SH3GL3-202ENST00000427482 CSH2P0DML3 217 aa27.25■■□□□ 1.95
SH3GL3-202ENST00000427482 STX2P32856 288 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms