RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 POU3F1Q03052 451 aaPredicted RBP5.28□□□□□ -1.56
LINC01040-201ENST00000425048 GALNT3Q14435 633 aa5.28□□□□□ -1.56
LINC01040-201ENST00000425048 ARHGAP15Q53QZ3 475 aa5.28□□□□□ -1.56
LINC01040-201ENST00000425048 ALG10Q5BKT4 473 aa5.28□□□□□ -1.56
LINC01040-201ENST00000425048 ALG10BQ5I7T1 473 aa5.28□□□□□ -1.56
LINC01040-201ENST00000425048 CAMK1DQ8IU85 385 aa5.28□□□□□ -1.56
LINC01040-201ENST00000425048 EXD3Q8N9H8 876 aa5.28□□□□□ -1.56
LINC01040-201ENST00000425048 FAR2Q96K12 515 aa5.28□□□□□ -1.56
LINC01040-201ENST00000425048 CATSPERBQ9H7T0 1116 aa5.28□□□□□ -1.56
LINC01040-201ENST00000425048 CXorf65A6NEN9 183 aa5.27□□□□□ -1.57
LINC01040-201ENST00000425048 PPP1R3DO95685 299 aa5.27□□□□□ -1.57
LINC01040-201ENST00000425048 FCGR1AP12314 374 aa5.27□□□□□ -1.57
LINC01040-201ENST00000425048 SLC16A2P36021 539 aa5.27□□□□□ -1.57
LINC01040-201ENST00000425048 PDLIM4P50479 330 aa5.27□□□□□ -1.57
LINC01040-201ENST00000425048 ZP1P60852 638 aa5.27□□□□□ -1.57
LINC01040-201ENST00000425048 SHC2P98077 582 aa5.27□□□□□ -1.57
LINC01040-201ENST00000425048 ZNF543Q08ER8 600 aa5.27□□□□□ -1.57
LINC01040-201ENST00000425048 CSHL1Q14406 222 aa5.27□□□□□ -1.57
LINC01040-201ENST00000425048 GFOD2Q3B7J2 385 aa5.27□□□□□ -1.57
LINC01040-201ENST00000425048 MSANTD2Q6P1R3 559 aa5.27□□□□□ -1.57
LINC01040-201ENST00000425048 C16orf82Q7Z2V1 217 aa5.27□□□□□ -1.57
LINC01040-201ENST00000425048 ENGASEQ8NFI3 743 aa5.27□□□□□ -1.57
LINC01040-201ENST00000425048 TMEM255BQ8WV15 326 aa5.27□□□□□ -1.57
LINC01040-201ENST00000425048 ZNF419Q96HQ0 510 aaPredicted RBP5.27□□□□□ -1.57
LINC01040-201ENST00000425048 WDR77Q9BQA1 342 aaPredicted RBP5.27□□□□□ -1.57
LINC01040-201ENST00000425048 PAAF1Q9BRP4 392 aa5.27□□□□□ -1.57
LINC01040-201ENST00000425048 KCNK9Q9NPC2 374 aa5.27□□□□□ -1.57
LINC01040-201ENST00000425048 RNF146Q9NTX7 359 aa5.27□□□□□ -1.57
LINC01040-201ENST00000425048 MYO1AQ9UBC5 1043 aa5.27□□□□□ -1.57
LINC01040-201ENST00000425048 PLEKHB1Q9UF11 243 aaPredicted RBP5.27□□□□□ -1.57
LINC01040-201ENST00000425048 KCNG2Q9UJ96 466 aa5.27□□□□□ -1.57
LINC01040-201ENST00000425048 MSI1O43347 362 aaKnown RBP5.26□□□□□ -1.57
LINC01040-201ENST00000425048 DDNO94850 711 aaPredicted RBP5.26□□□□□ -1.57
LINC01040-201ENST00000425048 PECAM1P16284 738 aaPredicted RBP5.26□□□□□ -1.57
LINC01040-201ENST00000425048 EGR1P18146 543 aa5.26□□□□□ -1.57
LINC01040-201ENST00000425048 KRTAP10-5P60370 271 aa5.26□□□□□ -1.57
LINC01040-201ENST00000425048 SEC61A1P61619 476 aaKnown RBP5.26□□□□□ -1.57
LINC01040-201ENST00000425048 KIF5AQ12840 1032 aa5.26□□□□□ -1.57
LINC01040-201ENST00000425048 COASYQ13057 564 aa5.26□□□□□ -1.57
LINC01040-201ENST00000425048 ERAP2Q6P179 960 aa5.26□□□□□ -1.57
LINC01040-201ENST00000425048 ARMC9Q7Z3E5 817 aa5.26□□□□□ -1.57
LINC01040-201ENST00000425048 ADGRF3Q8IZF5 1079 aa5.26□□□□□ -1.57
LINC01040-201ENST00000425048 MYO1HQ8N1T3 1032 aa5.26□□□□□ -1.57
LINC01040-201ENST00000425048 SLC25A41Q8N5S1 370 aa5.26□□□□□ -1.57
LINC01040-201ENST00000425048 SLC22A17Q8WUG5 538 aa5.26□□□□□ -1.57
LINC01040-201ENST00000425048 TXNRD2Q9NNW7 524 aa5.26□□□□□ -1.57
LINC01040-201ENST00000425048 PNRC2Q9NPJ4 139 aaKnown RBP5.26□□□□□ -1.57
LINC01040-201ENST00000425048 EID1Q9Y6B2 187 aa5.26□□□□□ -1.57
LINC01040-201ENST00000425048 GXYLT2A0PJZ3 443 aa5.25□□□□□ -1.57
LINC01040-201ENST00000425048 POM121BA6NF01 834 aa5.25□□□□□ -1.57
LINC01040-201ENST00000425048 KIF3BO15066 747 aa5.25□□□□□ -1.57
LINC01040-201ENST00000425048 SOCS5O75159 536 aa5.25□□□□□ -1.57
LINC01040-201ENST00000425048 ZBTB11O95625 1053 aaPredicted RBP5.25□□□□□ -1.57
LINC01040-201ENST00000425048 ALDOCP09972 364 aaKnown RBP5.25□□□□□ -1.57
LINC01040-201ENST00000425048 GABRB3P28472 473 aa5.25□□□□□ -1.57
LINC01040-201ENST00000425048 POLE2P56282 527 aa5.25□□□□□ -1.57
LINC01040-201ENST00000425048 SELENOVP59797 346 aa5.25□□□□□ -1.57
LINC01040-201ENST00000425048 NSUN2Q08J23 767 aaKnown RBP eCLIP5.25□□□□□ -1.57
LINC01040-201ENST00000425048 TDRD12Q587J7 1177 aaKnown RBP5.25□□□□□ -1.57
LINC01040-201ENST00000425048 FSCBQ5H9T9 825 aa5.25□□□□□ -1.57
LINC01040-201ENST00000425048 C9orf57Q5W0N0 161 aa5.25□□□□□ -1.57
LINC01040-201ENST00000425048 CYB5RLQ6IPT4 315 aa5.25□□□□□ -1.57
LINC01040-201ENST00000425048 RASGRP3Q8IV61 690 aa5.25□□□□□ -1.57
LINC01040-201ENST00000425048 FAM217AQ8IXS0 508 aa5.25□□□□□ -1.57
LINC01040-201ENST00000425048 CCDC33Q8N5R6 958 aa5.25□□□□□ -1.57
LINC01040-201ENST00000425048 ADAMTS14Q8WXS8 1223 aa5.25□□□□□ -1.57
LINC01040-201ENST00000425048 ADAD1Q96M93 576 aaKnown RBP5.25□□□□□ -1.57
LINC01040-201ENST00000425048 PRDM11Q9NQV5 511 aa5.25□□□□□ -1.57
LINC01040-201ENST00000425048 SLC4A4Q9Y6R1 1079 aa5.25□□□□□ -1.57
LINC01040-201ENST00000425048 SCN5AQ14524 2016 aa5.24□□□□□ -1.57
LINC01040-201ENST00000425048 PNMA6EA0A0J9YXQ4 647 aa5.24□□□□□ -1.57
LINC01040-201ENST00000425048 I6L893 689 aaPredicted RBP5.24□□□□□ -1.57
LINC01040-201ENST00000425048 NTN3O00634 580 aaPredicted RBP5.24□□□□□ -1.57
LINC01040-201ENST00000425048 DHHO43323 396 aa5.24□□□□□ -1.57
LINC01040-201ENST00000425048 CHRNA5P30532 468 aa5.24□□□□□ -1.57
LINC01040-201ENST00000425048 PIK3CBP42338 1070 aa5.24□□□□□ -1.57
LINC01040-201ENST00000425048 CLCN5P51795 746 aa5.24□□□□□ -1.57
LINC01040-201ENST00000425048 MAPKAPK3Q16644 382 aa5.24□□□□□ -1.57
LINC01040-201ENST00000425048 FAM76BQ5HYJ3 339 aa5.24□□□□□ -1.57
LINC01040-201ENST00000425048 TMEM88Q6PEY1 159 aa5.24□□□□□ -1.57
LINC01040-201ENST00000425048 CREB3L2Q70SY1 520 aa5.24□□□□□ -1.57
LINC01040-201ENST00000425048 FAM185AQ8N0U4 392 aa5.24□□□□□ -1.57
LINC01040-201ENST00000425048 CLIP4Q8N3C7 705 aa5.24□□□□□ -1.57
LINC01040-201ENST00000425048 RNF152Q8N8N0 203 aa5.24□□□□□ -1.57
LINC01040-201ENST00000425048 KDM1BQ8NB78 822 aa5.24□□□□□ -1.57
LINC01040-201ENST00000425048 RTP4Q96DX8 246 aa5.24□□□□□ -1.57
LINC01040-201ENST00000425048 C1QTNF4Q9BXJ3 329 aa5.24□□□□□ -1.57
LINC01040-201ENST00000425048 EIF2AQ9BY44 585 aaKnown RBP5.24□□□□□ -1.57
LINC01040-201ENST00000425048 TCEAL9Q9UHQ7 104 aa5.24□□□□□ -1.57
LINC01040-201ENST00000425048 DTX4Q9Y2E6 619 aa5.24□□□□□ -1.57
LINC01040-201ENST00000425048 KCNJ18B7U540 433 aa5.23□□□□□ -1.57
LINC01040-201ENST00000425048 MS4A18H0YCH9 400 aa5.23□□□□□ -1.57
LINC01040-201ENST00000425048 J3KTA2 159 aa5.23□□□□□ -1.57
LINC01040-201ENST00000425048 VWA5AO00534 786 aa5.23□□□□□ -1.57
LINC01040-201ENST00000425048 NKX2-8O15522 239 aa5.23□□□□□ -1.57
LINC01040-201ENST00000425048 ALDOAP04075 364 aaKnown RBP5.23□□□□□ -1.57
LINC01040-201ENST00000425048 ITGA5P08648 1049 aa5.23□□□□□ -1.57
LINC01040-201ENST00000425048 CHRNB2P17787 502 aa5.23□□□□□ -1.57
LINC01040-201ENST00000425048 IGFBP2P18065 325 aa5.23□□□□□ -1.57
LINC01040-201ENST00000425048 EEF1A2Q05639 463 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms