RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 PTPRFP10586 1907 aa17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 G3V2L1 256 aa17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 RAD17O75943 681 aa17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 CSPG5O95196 566 aa17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 P4HA1P13674 534 aa17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 MX2P20592 715 aa17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 CYP3A5P20815 502 aa17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 CYP2F1P24903 491 aa17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 VARSP26640 1264 aaKnown RBP17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 PDK2Q15119 407 aa17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 IL23RQ5VWK5 629 aa17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 POTEHQ6S545 545 aa17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 TMEM126BQ8IUX1 230 aa17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 TMEM192Q8IY95 271 aa17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 PDCD6IPQ8WUM4 868 aaKnown RBP17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 ATG4CQ96DT6 458 aa17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 TMEM134Q9H6X4 195 aa17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 CAB39LQ9H9S4 337 aa17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 ZNF711Q9Y462 761 aa17.06■□□□□ 0.32
NPC1L1-203ENST00000423141 GPR25O00155 361 aa17.05■□□□□ 0.32
NPC1L1-203ENST00000423141 OGTO15294 1046 aa17.05■□□□□ 0.32
NPC1L1-203ENST00000423141 ZNF23P17027 643 aa17.05■□□□□ 0.32
NPC1L1-203ENST00000423141 ENTPD1P49961 510 aa17.05■□□□□ 0.32
NPC1L1-203ENST00000423141 NDST2P52849 883 aa17.05■□□□□ 0.32
NPC1L1-203ENST00000423141 ATXN1P54253 815 aaKnown RBP17.05■□□□□ 0.32
NPC1L1-203ENST00000423141 CBX3Q13185 183 aa17.05■□□□□ 0.32
NPC1L1-203ENST00000423141 OLIG2Q13516 323 aa17.05■□□□□ 0.32
NPC1L1-203ENST00000423141 SEMA5AQ13591 1074 aa17.05■□□□□ 0.32
NPC1L1-203ENST00000423141 MGAT5BQ3V5L5 792 aa17.05■□□□□ 0.32
NPC1L1-203ENST00000423141 ERI1Q8IV48 349 aaKnown RBP17.05■□□□□ 0.32
NPC1L1-203ENST00000423141 CDKL3Q8IVW4 592 aaPredicted RBP17.05■□□□□ 0.32
NPC1L1-203ENST00000423141 ATP6V1E2Q96A05 226 aa17.05■□□□□ 0.32
NPC1L1-203ENST00000423141 EME1Q96AY2 570 aa17.05■□□□□ 0.32
NPC1L1-203ENST00000423141 INO80BQ9C086 356 aaPredicted RBP17.05■□□□□ 0.32
NPC1L1-203ENST00000423141 CAAP1Q9H8G2 361 aa17.05■□□□□ 0.32
NPC1L1-203ENST00000423141 WDR41Q9HAD4 459 aa17.05■□□□□ 0.32
NPC1L1-203ENST00000423141 FAF1Q9UNN5 650 aaPredicted RBP17.05■□□□□ 0.32
NPC1L1-203ENST00000423141 CDH15P55291 814 aa17.05■□□□□ 0.32
NPC1L1-203ENST00000423141 SFSWAPQ12872 951 aaKnown RBP17.05■□□□□ 0.32
NPC1L1-203ENST00000423141 GRM1Q13255 1194 aa17.05■□□□□ 0.32
NPC1L1-203ENST00000423141 ZNF667Q5HYK9 610 aa17.05■□□□□ 0.32
NPC1L1-203ENST00000423141 CYS1Q717R9 158 aa17.05■□□□□ 0.32
NPC1L1-203ENST00000423141 DCLK2Q8N568 766 aa17.05■□□□□ 0.32
NPC1L1-203ENST00000423141 MAML3Q96JK9 1138 aa17.05■□□□□ 0.32
NPC1L1-203ENST00000423141 HEXIM2Q96MH2 286 aaKnown RBP17.05■□□□□ 0.32
NPC1L1-203ENST00000423141 BCO2Q9BYV7 579 aa17.05■□□□□ 0.32
NPC1L1-203ENST00000423141 SUDS3Q9H7L9 328 aaPredicted RBP17.05■□□□□ 0.32
NPC1L1-203ENST00000423141 COQ10BQ9H8M1 238 aa17.05■□□□□ 0.32
NPC1L1-203ENST00000423141 SYBUQ9NX95 663 aa17.05■□□□□ 0.32
NPC1L1-203ENST00000423141 THEGQ9P2T0 379 aa17.05■□□□□ 0.32
NPC1L1-203ENST00000423141 MGAMO43451 1857 aa17.05■□□□□ 0.32
NPC1L1-203ENST00000423141 ACOT8O14734 319 aa17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 MAFGO15525 162 aa17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 FOXD2O60548 495 aaPredicted RBP17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 BCAS2O75934 225 aaPredicted RBP17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 CAPNS1P04632 268 aa17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 JUNP05412 331 aaKnown RBP17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 PDGFRBP09619 1106 aa17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 ME2P23368 584 aa17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 CDK9P50750 372 aaKnown RBP17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 PGGT1BP53609 377 aa17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 ITGA7Q13683 1181 aa17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 INSCQ1MX18 579 aa17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 METTL21CQ5VZV1 264 aa17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 MAP1SQ66K74 1059 aaPredicted RBP17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 ZPBP2Q6X784 338 aa17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 BBS5Q8N3I7 341 aa17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 TMA16Q96EY4 203 aaKnown RBP17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 TMEM176AQ96HP8 235 aa17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 NPAS2Q99743 824 aa17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 GCOM2Q9BZD3 368 aaPredicted RBP17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 NUF2Q9BZD4 464 aa17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 DHX35Q9H5Z1 703 aaKnown RBP17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 PADI4Q9UM07 663 aa17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 MAFBQ9Y5Q3 323 aaPredicted RBP17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 TNNC2P02585 160 aa17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 TFPTP0C1Z6 253 aa17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 HSPA13P48723 471 aa17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 ANKDD1AQ495B1 522 aa17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 BOLA3Q53S33 107 aa17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 CPNE9Q8IYJ1 553 aa17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 KCNN1Q92952 543 aa17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 GATA5Q9BWX5 397 aaPredicted RBP17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 MRPL4Q9BYD3 311 aaKnown RBP17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 TXNDC16Q9P2K2 825 aa17.04■□□□□ 0.32
NPC1L1-203ENST00000423141 TMX2-CTNND1H3BSU7 103 aa17.03■□□□□ 0.32
NPC1L1-203ENST00000423141 PLOD2O00469 737 aa17.03■□□□□ 0.32
NPC1L1-203ENST00000423141 CILPO75339 1184 aa17.03■□□□□ 0.32
NPC1L1-203ENST00000423141 ALDH3B2P48448 385 aa17.03■□□□□ 0.32
NPC1L1-203ENST00000423141 RSBN1LQ6PCB5 846 aaPredicted RBP17.03■□□□□ 0.32
NPC1L1-203ENST00000423141 MYO1HQ8N1T3 1032 aa17.03■□□□□ 0.32
NPC1L1-203ENST00000423141 RP9Q8TA86 221 aaKnown RBP17.03■□□□□ 0.32
NPC1L1-203ENST00000423141 CNDP1Q96KN2 507 aa17.03■□□□□ 0.32
NPC1L1-203ENST00000423141 WRNIP1Q96S55 665 aa17.03■□□□□ 0.32
NPC1L1-203ENST00000423141 LGMNQ99538 433 aa17.03■□□□□ 0.32
NPC1L1-203ENST00000423141 RRN3Q9NYV6 651 aa17.03■□□□□ 0.32
NPC1L1-203ENST00000423141 ARHGEF37A1IGU5 675 aa17.03■□□□□ 0.32
NPC1L1-203ENST00000423141 VWA5AO00534 786 aa17.03■□□□□ 0.32
NPC1L1-203ENST00000423141 CXCL8P10145 99 aa17.03■□□□□ 0.32
NPC1L1-203ENST00000423141 PGAM4Q8N0Y7 254 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms