RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 HEMK1Q9Y5R4 338 aaPredicted RBP2.99□□□□□ -1.93
VPS41-206ENST00000418457 MORC2Q9Y6X9 1032 aaPredicted RBP2.99□□□□□ -1.93
VPS41-206ENST00000418457 MAP3K4Q9Y6R4 1608 aa2.99□□□□□ -1.93
VPS41-206ENST00000418457 RTEL1-TNFRSF6BF6WH68 1400 aa2.99□□□□□ -1.93
VPS41-206ENST00000418457 PTPRTO14522 1441 aa2.99□□□□□ -1.93
VPS41-206ENST00000418457 YEATS2Q9ULM3 1422 aa2.99□□□□□ -1.93
VPS41-206ENST00000418457 NCOA3Q9Y6Q9 1424 aa2.99□□□□□ -1.93
VPS41-206ENST00000418457 ADGRB2O60241 1585 aa2.99□□□□□ -1.93
VPS41-206ENST00000418457 HECW2Q9P2P5 1572 aa2.99□□□□□ -1.93
VPS41-206ENST00000418457 INO80Q9ULG1 1556 aaPredicted RBP2.99□□□□□ -1.93
VPS41-206ENST00000418457 NSD2O96028 1365 aa2.99□□□□□ -1.93
VPS41-206ENST00000418457 ZC3H13Q5T200 1668 aaKnown RBP2.98□□□□□ -1.93
VPS41-206ENST00000418457 CLTCL1P53675 1640 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 M0QYT0 321 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 IPO5O00410 1097 aaKnown RBP2.98□□□□□ -1.93
VPS41-206ENST00000418457 RBMXL2O75526 392 aaKnown RBP2.98□□□□□ -1.93
VPS41-206ENST00000418457 VEGFAP15692 232 aaPredicted RBP2.98□□□□□ -1.93
VPS41-206ENST00000418457 NDUFS1P28331 727 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 GRK5P34947 590 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 VPS41P49754 854 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 PNLIPRP1P54315 467 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 CCDC173Q0VFZ6 552 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 GAB1Q13480 694 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 KPNB1Q14974 876 aaKnown RBP2.98□□□□□ -1.93
VPS41-206ENST00000418457 POSTNQ15063 836 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 ZRSR2Q15696 482 aaKnown RBP2.98□□□□□ -1.93
VPS41-206ENST00000418457 GORABQ5T7V8 394 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 TTC22Q5TAA0 569 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 JMJD6Q6NYC1 403 aaPredicted RBP2.98□□□□□ -1.93
VPS41-206ENST00000418457 WDR93Q6P2C0 686 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 SYCE2Q6PIF2 218 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 KYAT3Q6YP21 454 aaKnown RBP2.98□□□□□ -1.93
VPS41-206ENST00000418457 ZNF813Q6ZN06 617 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 RINLQ6ZS11 566 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 RFX8Q6ZV50 586 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 SMC5Q8IY18 1101 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 LAS2Q8IYD9 372 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 DPF1Q92782 380 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 SNX21Q969T3 373 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 C3orf49Q96BT1 292 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 ZNF764Q96H86 408 aaPredicted RBP2.98□□□□□ -1.93
VPS41-206ENST00000418457 C5orf34Q96MH7 638 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 SENP7Q9BQF6 1050 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 EFHD1Q9BUP0 239 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 MECRQ9BV79 373 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 ELOVL1Q9BW60 279 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 PDCL3Q9H2J4 239 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 GRPEL1Q9HAV7 217 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 LIN7CQ9NUP9 197 aaKnown RBP2.98□□□□□ -1.93
VPS41-206ENST00000418457 ASNSD1Q9NWL6 643 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 RAB21Q9UL25 225 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 TRPC5Q9UL62 973 aaPredicted RBP2.98□□□□□ -1.93
VPS41-206ENST00000418457 DAPP1Q9UN19 280 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 ZBTB1Q9Y2K1 713 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 SIRT4Q9Y6E7 314 aaPredicted RBP2.98□□□□□ -1.93
VPS41-206ENST00000418457 ARHGAP31Q2M1Z3 1444 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 VWDEQ8N2E2 1590 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 ABCC1P33527 1531 aa2.98□□□□□ -1.93
VPS41-206ENST00000418457 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.98□□□□□ -1.93
VPS41-206ENST00000418457 ABCA6Q8N139 1617 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 ERVK-7P63135 1459 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 ANKRD26Q9UPS8 1709 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 CFAP74Q9C0B2 1584 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 TBC1D3DA0A087WVF3 549 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 TBC1D3IA0A087WXS9 549 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 TBC1D3EA0A087X179 549 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 TBC1D3KA0A087X1G2 549 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 TBC1D3BA6NDS4 549 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 TBC1D3FA6NER0 549 aaPredicted RBP2.97□□□□□ -1.93
VPS41-206ENST00000418457 WIPF3A6NGB9 483 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 HMX3A6NHT5 357 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 C3orf70A6NLC5 250 aaPredicted RBP2.97□□□□□ -1.93
VPS41-206ENST00000418457 SLC38A8A6NNN8 435 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 TBC1D3LB9A6J9 549 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 PRYO14603 147 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 PIP5K1CO60331 668 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 IGHDP01880 384 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 ALDOAP04075 364 aaKnown RBP2.97□□□□□ -1.93
VPS41-206ENST00000418457 TBC1D3HP0C7X1 549 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 DHRS4L1P0CG22 281 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 CERS1P27544 350 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 CST5P28325 142 aaPredicted RBP2.97□□□□□ -1.93
VPS41-206ENST00000418457 TACR3P29371 465 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 SERPINA4P29622 427 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 HOXD12P35452 270 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 STAT6P42226 847 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 AGTR2P50052 363 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 CDK7P50613 346 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 RARSP54136 660 aaKnown RBP2.97□□□□□ -1.93
VPS41-206ENST00000418457 TAS2R50P59544 299 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 RPL15P61313 204 aaKnown RBP2.97□□□□□ -1.93
VPS41-206ENST00000418457 RBM6P78332 1123 aaKnown RBP2.97□□□□□ -1.93
VPS41-206ENST00000418457 TLE3Q04726 772 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 FOXF2Q12947 444 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 ZNF268Q14587 947 aaPredicted RBP2.97□□□□□ -1.93
VPS41-206ENST00000418457 TBRG1Q3YBR2 411 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 GLE1Q53GS7 698 aaKnown RBP2.97□□□□□ -1.93
VPS41-206ENST00000418457 INO80DQ53TQ3 878 aaPredicted RBP2.97□□□□□ -1.93
VPS41-206ENST00000418457 ZKSCAN2Q63HK3 967 aa2.97□□□□□ -1.93
VPS41-206ENST00000418457 TBC1D3GQ6DHY5 549 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms