RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 TDRD10Q5VZ19 366 aaKnown RBP15.05■□□□□ 0
NCKIPSD-204ENST00000416649 SNRNP48Q6IEG0 339 aaKnown RBP15.05■□□□□ 0
NCKIPSD-204ENST00000416649 GPD1LQ8N335 351 aa15.05■□□□□ 0
NCKIPSD-204ENST00000416649 FIBCD1Q8N539 461 aa15.05■□□□□ 0
NCKIPSD-204ENST00000416649 SCAIQ8N9R8 606 aa15.05■□□□□ 0
NCKIPSD-204ENST00000416649 FERMT1Q9BQL6 677 aa15.05■□□□□ 0
NCKIPSD-204ENST00000416649 EIF2AQ9BY44 585 aaKnown RBP15.05■□□□□ 0
NCKIPSD-204ENST00000416649 INO80BQ9C086 356 aaPredicted RBP15.05■□□□□ 0
NCKIPSD-204ENST00000416649 EMCNQ9ULC0 261 aa15.05■□□□□ 0
NCKIPSD-204ENST00000416649 C1orf232A0A0U1RR37 186 aa15.05■□□□□ -0
NCKIPSD-204ENST00000416649 C3orf70A6NLC5 250 aaPredicted RBP15.05■□□□□ -0
NCKIPSD-204ENST00000416649 FAM189A1O60320 539 aa15.05■□□□□ -0
NCKIPSD-204ENST00000416649 GSRP00390 522 aa15.05■□□□□ -0
NCKIPSD-204ENST00000416649 CKMT2P17540 419 aa15.05■□□□□ -0
NCKIPSD-204ENST00000416649 YWHABP31946 246 aaKnown RBP15.05■□□□□ -0
NCKIPSD-204ENST00000416649 WNT7BP56706 349 aa15.05■□□□□ -0
NCKIPSD-204ENST00000416649 ABCE1P61221 599 aaKnown RBP15.05■□□□□ -0
NCKIPSD-204ENST00000416649 SPIDRQ14159 915 aa15.05■□□□□ -0
NCKIPSD-204ENST00000416649 KCNJ11Q14654 390 aa15.05■□□□□ -0
NCKIPSD-204ENST00000416649 HADHQ16836 314 aaKnown RBP15.05■□□□□ -0
NCKIPSD-204ENST00000416649 MTX3Q5HYI7 312 aa15.05■□□□□ -0
NCKIPSD-204ENST00000416649 SLC39A4Q6P5W5 647 aa15.05■□□□□ -0
NCKIPSD-204ENST00000416649 TTC33Q6PID6 262 aaPredicted RBP15.05■□□□□ -0
NCKIPSD-204ENST00000416649 TMEM26Q6ZUK4 368 aa15.05■□□□□ -0
NCKIPSD-204ENST00000416649 ZNF280CQ8ND82 737 aa15.05■□□□□ -0
NCKIPSD-204ENST00000416649 CLEC4DQ8WXI8 215 aa15.05■□□□□ -0
NCKIPSD-204ENST00000416649 SNX27Q96L92 541 aa15.05■□□□□ -0
NCKIPSD-204ENST00000416649 RMDN3Q96TC7 470 aa15.05■□□□□ -0
NCKIPSD-204ENST00000416649 NDEL1Q9GZM8 345 aa15.05■□□□□ -0
NCKIPSD-204ENST00000416649 NAA50Q9GZZ1 169 aaKnown RBP15.05■□□□□ -0
NCKIPSD-204ENST00000416649 WDR41Q9HAD4 459 aa15.05■□□□□ -0
NCKIPSD-204ENST00000416649 CXorf21Q9HAI6 301 aa15.05■□□□□ -0
NCKIPSD-204ENST00000416649 TCEAL9Q9UHQ7 104 aa15.05■□□□□ -0
NCKIPSD-204ENST00000416649 PLIN3O60664 434 aa15.04■□□□□ -0
NCKIPSD-204ENST00000416649 LRCH4O75427 683 aa15.04■□□□□ -0
NCKIPSD-204ENST00000416649 CALB1P05937 261 aa15.04■□□□□ -0
NCKIPSD-204ENST00000416649 ACO1P21399 889 aaKnown RBP15.04■□□□□ -0
NCKIPSD-204ENST00000416649 BACE1P56817 501 aa15.04■□□□□ -0
NCKIPSD-204ENST00000416649 CRADDP78560 199 aa15.04■□□□□ -0
NCKIPSD-204ENST00000416649 TRAF2Q12933 501 aa15.04■□□□□ -0
NCKIPSD-204ENST00000416649 NME3Q13232 169 aa15.04■□□□□ -0
NCKIPSD-204ENST00000416649 DMP1Q13316 513 aaPredicted RBP15.04■□□□□ -0
NCKIPSD-204ENST00000416649 IKBKEQ14164 716 aa15.04■□□□□ -0
NCKIPSD-204ENST00000416649 UGCGQ16739 394 aa15.04■□□□□ -0
NCKIPSD-204ENST00000416649 TRIM16LQ309B1 348 aa15.04■□□□□ -0
NCKIPSD-204ENST00000416649 METTL21CQ5VZV1 264 aa15.04■□□□□ -0
NCKIPSD-204ENST00000416649 BSPRYQ5W0U4 402 aa15.04■□□□□ -0
NCKIPSD-204ENST00000416649 TMEM102Q8N9M5 508 aaPredicted RBP15.04■□□□□ -0
NCKIPSD-204ENST00000416649 JOSD2Q8TAC2 188 aa15.04■□□□□ -0
NCKIPSD-204ENST00000416649 KCNN1Q92952 543 aa15.04■□□□□ -0
NCKIPSD-204ENST00000416649 MFSD14AQ96MC6 490 aa15.04■□□□□ -0
NCKIPSD-204ENST00000416649 DRC3Q9H069 523 aa15.04■□□□□ -0
NCKIPSD-204ENST00000416649 PCDHAC1Q9H158 963 aa15.04■□□□□ -0
NCKIPSD-204ENST00000416649 TCF7L2Q9NQB0 619 aa15.04■□□□□ -0
NCKIPSD-204ENST00000416649 SACM1LQ9NTJ5 587 aa15.04■□□□□ -0
NCKIPSD-204ENST00000416649 GID8Q9NWU2 228 aa15.04■□□□□ -0
NCKIPSD-204ENST00000416649 TJP2Q9UDY2 1190 aa15.04■□□□□ -0
NCKIPSD-204ENST00000416649 PRPF19Q9UMS4 504 aaKnown RBP15.04■□□□□ -0
NCKIPSD-204ENST00000416649 FER1L6Q2WGJ9 1857 aa15.04■□□□□ -0
NCKIPSD-204ENST00000416649 PRSS51A0A1B0GVH4 220 aa15.04■□□□□ -0
NCKIPSD-204ENST00000416649 MYL4P12829 197 aa15.04■□□□□ -0
NCKIPSD-204ENST00000416649 BMXP51813 675 aa15.04■□□□□ -0
NCKIPSD-204ENST00000416649 MRPS9P82933 396 aaKnown RBP15.04■□□□□ -0
NCKIPSD-204ENST00000416649 DMPKQ09013 629 aa15.04■□□□□ -0
NCKIPSD-204ENST00000416649 RGS21Q2M5E4 152 aa15.04■□□□□ -0
NCKIPSD-204ENST00000416649 AARS2Q5JTZ9 985 aaKnown RBP15.04■□□□□ -0
NCKIPSD-204ENST00000416649 CYP2R1Q6VVX0 501 aa15.04■□□□□ -0
NCKIPSD-204ENST00000416649 TMEM161BQ8NDZ6 487 aa15.04■□□□□ -0
NCKIPSD-204ENST00000416649 TBC1D15Q8TC07 691 aa15.04■□□□□ -0
NCKIPSD-204ENST00000416649 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.04■□□□□ -0
NCKIPSD-204ENST00000416649 HIPK3Q9H422 1215 aa15.04■□□□□ -0
NCKIPSD-204ENST00000416649 PLAC1Q9HBJ0 212 aa15.04■□□□□ -0
NCKIPSD-204ENST00000416649 VPS45Q9NRW7 570 aa15.04■□□□□ -0
NCKIPSD-204ENST00000416649 ADORA2AP29274 412 aa15.03■□□□□ -0
NCKIPSD-204ENST00000416649 DPP6P42658 865 aa15.03■□□□□ -0
NCKIPSD-204ENST00000416649 PIGGQ5H8A4 983 aa15.03■□□□□ -0
NCKIPSD-204ENST00000416649 WDR78Q5VTH9 848 aa15.03■□□□□ -0
NCKIPSD-204ENST00000416649 TMEM198Q66K66 360 aa15.03■□□□□ -0
NCKIPSD-204ENST00000416649 SYTL5Q8TDW5 730 aaPredicted RBP15.03■□□□□ -0
NCKIPSD-204ENST00000416649 OSBPL11Q9BXB4 747 aa15.03■□□□□ -0
NCKIPSD-204ENST00000416649 NOL11Q9H8H0 719 aaKnown RBP15.03■□□□□ -0
NCKIPSD-204ENST00000416649 SLC38A10Q9HBR0 1119 aa15.03■□□□□ -0
NCKIPSD-204ENST00000416649 RNF146Q9NTX7 359 aa15.03■□□□□ -0
NCKIPSD-204ENST00000416649 TMEM216Q9P0N5 145 aa15.03■□□□□ -0
NCKIPSD-204ENST00000416649 VPS51Q9UID3 782 aa15.03■□□□□ -0
NCKIPSD-204ENST00000416649 PSME4Q14997 1843 aa15.03■□□□□ -0
NCKIPSD-204ENST00000416649 SLC15A5A6NIM6 579 aa15.03■□□□□ -0
NCKIPSD-204ENST00000416649 APOC4-APOC2K7ER74 178 aa15.03■□□□□ -0
NCKIPSD-204ENST00000416649 VWA5AO00534 786 aa15.03■□□□□ -0
NCKIPSD-204ENST00000416649 APOC2P02655 101 aa15.03■□□□□ -0
NCKIPSD-204ENST00000416649 F7P08709 466 aaPredicted RBP15.03■□□□□ -0
NCKIPSD-204ENST00000416649 KRT7P08729 469 aa15.03■□□□□ -0
NCKIPSD-204ENST00000416649 PRKCHP24723 683 aa15.03■□□□□ -0
NCKIPSD-204ENST00000416649 LDLRAP1Q5SW96 308 aa15.03■□□□□ -0
NCKIPSD-204ENST00000416649 DCAF15Q66K64 600 aa15.03■□□□□ -0
NCKIPSD-204ENST00000416649 GPAT2Q6NUI2 795 aa15.03■□□□□ -0
NCKIPSD-204ENST00000416649 CAND1Q86VP6 1230 aaKnown RBP15.03■□□□□ -0
NCKIPSD-204ENST00000416649 NPAS2Q99743 824 aa15.03■□□□□ -0
NCKIPSD-204ENST00000416649 DHX33Q9H6R0 707 aaKnown RBP15.03■□□□□ -0
NCKIPSD-204ENST00000416649 SUN2Q9UH99 717 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms